Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01605

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,724,381	+				+0.1
1,724,381	+				-0.1
1,724,389	-				+0.8
1,724,389	-				-0.5
1,724,478	-				+0.8
1,724,478	-				+1.0
1,724,508	+				+0.4
1,724,508	+				+0.1
1,724,513	+				-0.0
1,724,516	-				+1.7
1,724,516	-				+0.2
1,724,516	-				+0.5
1,724,516	-				+0.7
1,724,540	+				-2.2
1,724,548	-				-0.5
1,724,604	-				-0.0
1,724,631	-				+0.2
1,724,772	+				-1.5
1,724,780	-				-0.3
1,724,797	-				+0.8
1,724,913	-		CCNA_01604	0.26	+0.4
1,724,918	-		CCNA_01604	0.27	-1.5
1,724,918	-		CCNA_01604	0.27	-0.6
1,724,918	-		CCNA_01604	0.27	-1.7
1,724,933	+		CCNA_01604	0.29	-0.2
1,724,935	-		CCNA_01604	0.29	-2.1
1,724,943	+		CCNA_01604	0.31	-1.5
1,724,951	-		CCNA_01604	0.32	+1.7
1,724,974	-		CCNA_01604	0.36	-0.2
1,724,981	-		CCNA_01604	0.37	-0.2
1,724,992	+		CCNA_01604	0.39	-0.6
1,724,993	+		CCNA_01604	0.39	+0.2
1,725,012	+		CCNA_01604	0.42	+0.3
1,725,012	+		CCNA_01604	0.42	+0.0
1,725,027	+		CCNA_01604	0.45	+0.7
1,725,048	+		CCNA_01604	0.48	-0.3
1,725,070	-		CCNA_01604	0.52	-1.4
1,725,070	-		CCNA_01604	0.52	+0.4
1,725,070	-		CCNA_01604	0.52	-2.5
1,725,082	-		CCNA_01604	0.54	-1.2
1,725,082	-		CCNA_01604	0.54	-1.1
1,725,084	+		CCNA_01604	0.55	-1.0
1,725,093	+		CCNA_01604	0.56	-0.2
1,725,111	-		CCNA_01604	0.59	-1.2
1,725,143	+		CCNA_01604	0.64	-0.3
1,725,144	+		CCNA_01604	0.65	-0.8
1,725,167	-		CCNA_01604	0.69	+0.2
1,725,170	+		CCNA_01604	0.69	+0.4
1,725,184	-		CCNA_01604	0.71	-1.8
1,725,192	+		CCNA_01604	0.73	-0.8
1,725,194	+		CCNA_01604	0.73	-0.8
1,725,194	+		CCNA_01604	0.73	-0.4
1,725,202	-		CCNA_01604	0.74	+0.5
1,725,202	-		CCNA_01604	0.74	-2.0
1,725,202	-		CCNA_01604	0.74	-1.5
1,725,202	-		CCNA_01604	0.74	-0.1
1,725,202	-		CCNA_01604	0.74	+0.7
1,725,226	+		CCNA_01604	0.78	+0.3
1,725,282	+		CCNA_01604	0.88	+0.2
1,725,282	+		CCNA_01604	0.88	+0.5
1,725,282	+		CCNA_01604	0.88	+0.4
1,725,282	+		CCNA_01604	0.88	+0.1
1,725,290	-		CCNA_01604	0.89	-1.4
1,725,356	-				-1.0
1,725,356	-				+1.5
1,725,411	-		CCNA_01605	0.11	-0.0
1,725,460	-		CCNA_01605	0.20	-1.6
1,725,470	-		CCNA_01605	0.22	-0.1
1,725,487	+		CCNA_01605	0.25	-0.8
1,725,487	+		CCNA_01605	0.25	-1.3
1,725,495	-		CCNA_01605	0.27	+0.8
1,725,495	-		CCNA_01605	0.27	-0.3
1,725,495	-		CCNA_01605	0.27	-0.6
1,725,508	+		CCNA_01605	0.29	-0.5
1,725,516	-		CCNA_01605	0.31	-0.6
1,725,516	-		CCNA_01605	0.31	+0.6
1,725,516	-		CCNA_01605	0.31	-0.0
1,725,516	-		CCNA_01605	0.31	+0.5
1,725,516	-		CCNA_01605	0.31	+0.1
1,725,516	-		CCNA_01605	0.31	+0.8
1,725,540	+		CCNA_01605	0.35	-0.3
1,725,550	+		CCNA_01605	0.37	-0.6
1,725,558	-		CCNA_01605	0.39	-0.8
1,725,560	+		CCNA_01605	0.39	+0.1
1,725,570	+		CCNA_01605	0.41	-1.2
1,725,628	-		CCNA_01605	0.51	-1.7
1,725,654	+		CCNA_01605	0.56	-0.8
1,725,654	+		CCNA_01605	0.56	-0.2
1,725,654	+		CCNA_01605	0.56	+0.5
1,725,662	-		CCNA_01605	0.58	-0.4
1,725,672	+		CCNA_01605	0.60	+0.4
1,725,682	-		CCNA_01605	0.61	+0.7
1,725,690	-		CCNA_01605	0.63	+0.6
1,725,698	+		CCNA_01605	0.64	-0.1
1,725,735	+		CCNA_01605	0.71	+0.1
1,725,743	-		CCNA_01605	0.73	+0.7
1,725,794	+		CCNA_01605	0.82	-0.3
1,725,825	+		CCNA_01605	0.88	-1.5
1,725,838	-				-0.3
1,725,840	+				-1.5
1,725,843	-				-0.3
1,725,855	+				-2.2
1,725,863	-				-1.5
1,725,875	+				+1.0
1,725,900	-				-0.2
1,725,906	-				-0.7
1,725,977	-		CCNA_01606	0.12	+0.4
1,726,066	-		CCNA_01606	0.25	+0.7
1,726,097	-		CCNA_01606	0.30	-0.5
1,726,107	+		CCNA_01606	0.31	+0.5
1,726,115	+		CCNA_01606	0.32	-1.2
1,726,115	-		CCNA_01606	0.32	+0.4
1,726,129	+		CCNA_01606	0.35	+0.7
1,726,137	-		CCNA_01606	0.36	+0.1
1,726,162	-		CCNA_01606	0.40	+0.1
1,726,164	+		CCNA_01606	0.40	-0.6
1,726,219	-		CCNA_01606	0.48	+0.8
1,726,231	-		CCNA_01606	0.50	+0.2
1,726,241	-		CCNA_01606	0.51	+0.3
1,726,254	+		CCNA_01606	0.53	-1.9
1,726,345	+		CCNA_01606	0.67	-0.9
1,726,357	+		CCNA_01606	0.69	+1.9
1,726,415	+		CCNA_01606	0.78	-1.1
1,726,433	-		CCNA_01606	0.80	-1.5
1,726,458	-		CCNA_01606	0.84	+0.4
1,726,460	+		CCNA_01606	0.84	+0.0
1,726,472	+		CCNA_01606	0.86	-1.0
1,726,473	-		CCNA_01606	0.86	+1.7
1,726,651	-				-0.4
1,726,738	-				-1.1
1,726,780	-				+0.6
1,726,858	+		CCNA_01607	0.11	-1.1
1,726,866	-		CCNA_01607	0.12	+0.4
1,726,870	+		CCNA_01607	0.12	+0.9