Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01517

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,625,560	+				+1.4
1,625,566	+				-1.1
1,625,573	-				-0.4
1,625,659	-				-0.3
1,625,660	+				+0.2
1,625,660	+				-0.1
1,625,706	+				-0.1
1,625,706	+				-1.5
1,625,719	+				-0.2
1,625,719	+				+0.5
1,625,719	+				+1.2
1,625,719	+				+0.3
1,625,719	+				+0.3
1,625,727	-				-0.2
1,625,727	-				-0.4
1,625,727	-				-0.5
1,625,727	-				-0.9
1,625,727	-				-0.5
1,625,727	-				-0.6
1,625,736	+				+0.3
1,625,744	-				+0.7
1,625,902	+		CCNA_01516	0.19	-1.4
1,625,910	-		CCNA_01516	0.21	+0.5
1,625,917	-		CCNA_01516	0.22	+0.5
1,625,929	-		CCNA_01516	0.24	+0.3
1,625,967	-		CCNA_01516	0.30	-0.1
1,625,984	+		CCNA_01516	0.32	-0.7
1,625,992	-		CCNA_01516	0.33	+1.2
1,626,004	-		CCNA_01516	0.35	+0.2
1,626,004	-		CCNA_01516	0.35	-0.3
1,626,006	+		CCNA_01516	0.36	-1.3
1,626,045	+		CCNA_01516	0.42	-1.7
1,626,120	+		CCNA_01516	0.54	-0.2
1,626,156	+		CCNA_01516	0.59	-0.5
1,626,159	-		CCNA_01516	0.60	-0.4
1,626,164	-		CCNA_01516	0.61	+1.3
1,626,175	-		CCNA_01516	0.62	+1.3
1,626,190	+		CCNA_01516	0.65	+0.2
1,626,210	-		CCNA_01516	0.68	-0.5
1,626,212	-		CCNA_01516	0.68	-0.7
1,626,212	-		CCNA_01516	0.68	-2.3
1,626,231	+		CCNA_01516	0.71	-1.3
1,626,336	+		CCNA_01516	0.88	-1.1
1,626,336	+		CCNA_01516	0.88	+0.8
1,626,336	+		CCNA_01516	0.88	-2.5
1,626,344	-		CCNA_01516	0.89	+1.2
1,626,354	+				-1.1
1,626,417	-				-1.2
1,626,431	-				-0.5
1,626,514	+				-1.8
1,626,519	+				-0.3
1,626,527	-				+1.2
1,626,527	-				+0.5
1,626,659	+		CCNA_01517	0.11	-1.4
1,626,666	+		CCNA_01517	0.11	-0.7
1,626,679	-		CCNA_01517	0.13	+0.2
1,626,736	+		CCNA_01517	0.18	+0.8
1,626,757	-		CCNA_01517	0.20	+0.2
1,626,757	-		CCNA_01517	0.20	+0.5
1,626,770	+		CCNA_01517	0.22	-0.8
1,626,793	+		CCNA_01517	0.24	-1.0
1,626,793	+		CCNA_01517	0.24	+1.2
1,626,801	-		CCNA_01517	0.25	+1.3
1,626,801	-		CCNA_01517	0.25	+0.6
1,626,811	-		CCNA_01517	0.26	+0.4
1,626,823	+		CCNA_01517	0.27	+0.2
1,626,833	-		CCNA_01517	0.28	+0.2
1,626,961	-		CCNA_01517	0.40	+0.6
1,626,966	+		CCNA_01517	0.41	+0.3
1,626,966	+		CCNA_01517	0.41	-0.5
1,627,031	+		CCNA_01517	0.47	-0.0
1,627,084	-		CCNA_01517	0.52	+0.3
1,627,132	+		CCNA_01517	0.57	-0.8
1,627,248	+		CCNA_01517	0.68	-0.6
1,627,256	-		CCNA_01517	0.69	+0.2
1,627,272	+		CCNA_01517	0.70	+0.8
1,627,292	+		CCNA_01517	0.72	-0.4
1,627,292	+		CCNA_01517	0.72	-2.0
1,627,293	+		CCNA_01517	0.72	+0.7
1,627,293	+		CCNA_01517	0.72	+2.6
1,627,293	+		CCNA_01517	0.72	-0.2
1,627,293	+		CCNA_01517	0.72	+0.5
1,627,293	+		CCNA_01517	0.72	-1.3
1,627,308	+		CCNA_01517	0.74	+0.7
1,627,360	+		CCNA_01517	0.79	-0.4
1,627,391	-		CCNA_01517	0.82	-0.5
1,627,430	+		CCNA_01517	0.86	-0.3
1,627,462	-		CCNA_01517	0.89	+1.1
1,627,498	-				+0.7
1,627,531	-				+0.5
1,627,654	-		CCNA_03892	0.18	+1.3
1,627,706	+		CCNA_03892	0.26	-0.6
1,627,706	+		CCNA_03892	0.26	+0.6
1,627,781	+		CCNA_03892	0.38	+0.2
1,627,781	+		CCNA_03892	0.38	-0.0
1,627,789	-		CCNA_03892	0.39	+0.4
1,627,789	-		CCNA_03892	0.39	+0.7
1,627,789	-		CCNA_03892	0.39	+0.9
1,627,833	-		CCNA_03892	0.46	-0.1
1,627,868	-		CCNA_03892	0.51	+0.9
1,627,878	-		CCNA_03892	0.53	+0.2
1,627,878	-		CCNA_03892	0.53	+0.6
1,627,879	+		CCNA_03892	0.53	+0.7
1,627,957	+		CCNA_03892	0.65	-0.2
1,627,957	+		CCNA_03892	0.65	-0.1
1,627,965	-		CCNA_03892	0.66	+0.3
1,627,990	+		CCNA_03892	0.70	+1.2
1,627,993	-		CCNA_03892	0.70	+1.3
1,628,000	-		CCNA_03892	0.71	-0.7
1,628,003	-		CCNA_03892	0.72	+0.2
1,628,028	+		CCNA_03892	0.76	-0.1
1,628,041	-		CCNA_03892	0.78	-0.1
1,628,041	-		CCNA_03892	0.78	+0.9
1,628,055	+		CCNA_03892	0.80	+0.2
1,628,055	+		CCNA_03892	0.80	-0.5
1,628,055	+		CCNA_03892	0.80	-0.5
1,628,111	+		CCNA_03892	0.89	-1.2
1,628,119	-				+0.4
1,628,129	+				-0.8
1,628,154	-				+0.2
1,628,242	-				+0.8
1,628,258	-				+0.2
1,628,258	-				+0.6
1,628,319	+				-0.3
1,628,362	+				-0.6
1,628,389	-		CCNA_01519	0.12	+0.3
1,628,417	+		CCNA_01519	0.16	+0.9
1,628,463	-		CCNA_01519	0.21	+0.3
1,628,466	+		CCNA_01519	0.22	+0.9
1,628,466	+		CCNA_01519	0.22	+0.7
1,628,467	-		CCNA_01519	0.22	-0.7
1,628,469	-		CCNA_01519	0.22	+1.2
1,628,473	+		CCNA_01519	0.23	+0.7
1,628,473	+		CCNA_01519	0.23	-0.3
1,628,473	+		CCNA_01519	0.23	-0.5
1,628,473	+		CCNA_01519	0.23	+0.5
1,628,473	+		CCNA_01519	0.23	+0.4
1,628,473	+		CCNA_01519	0.23	+0.1
1,628,473	+		CCNA_01519	0.23	-0.3
1,628,473	+		CCNA_01519	0.23	+0.5
1,628,474	-		CCNA_01519	0.23	-0.5
1,628,481	-		CCNA_01519	0.23	-0.1
1,628,481	-		CCNA_01519	0.23	+0.4
1,628,481	-		CCNA_01519	0.23	-0.3
1,628,481	-		CCNA_01519	0.23	-1.2
1,628,481	-		CCNA_01519	0.23	-2.3
1,628,481	-		CCNA_01519	0.23	-0.8
1,628,481	-		CCNA_01519	0.23	-0.4
1,628,483	+		CCNA_01519	0.24	+0.4
1,628,483	+		CCNA_01519	0.24	-0.2
1,628,483	+		CCNA_01519	0.24	+0.2
1,628,483	+		CCNA_01519	0.24	-0.2
1,628,483	+		CCNA_01519	0.24	+1.0
1,628,483	+		CCNA_01519	0.24	+0.0
1,628,491	-		CCNA_01519	0.25	+0.7
1,628,538	+		CCNA_01519	0.31	+0.2
1,628,567	+		CCNA_01519	0.34	-0.3
1,628,567	+		CCNA_01519	0.34	+1.6
1,628,567	+		CCNA_01519	0.34	+0.2
1,628,575	-		CCNA_01519	0.35	-0.3