Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01478

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,584,623	+		CCNA_01477	0.28	+0.5
1,584,731	-		CCNA_01477	0.36	+0.5
1,584,739	+		CCNA_01477	0.37	+1.4
1,584,754	+		CCNA_01477	0.38	-0.8
1,584,768	-		CCNA_01477	0.39	+0.7
1,584,779	+		CCNA_01477	0.40	-1.3
1,584,837	+		CCNA_01477	0.44	-1.0
1,584,874	-		CCNA_01477	0.47	-1.0
1,584,899	+		CCNA_01477	0.48	-2.9
1,584,951	+		CCNA_01477	0.52	-2.2
1,584,951	+		CCNA_01477	0.52	-1.8
1,585,019	-		CCNA_01477	0.57	-0.4
1,585,062	+		CCNA_01477	0.60	-1.2
1,585,130	-		CCNA_01477	0.65	-0.8
1,585,164	+		CCNA_01477	0.68	-1.0
1,585,202	-		CCNA_01477	0.71	-0.2
1,585,214	+		CCNA_01477	0.72	+1.6
1,585,224	+		CCNA_01477	0.72	+0.3
1,585,245	+		CCNA_01477	0.74	-0.1
1,585,252	+		CCNA_01477	0.74	+1.6
1,585,265	-		CCNA_01477	0.75	-0.3
1,585,276	-		CCNA_01477	0.76	-1.6
1,585,277	+		CCNA_01477	0.76	-0.7
1,585,346	-		CCNA_01477	0.81	+0.2
1,585,474	+				-0.8
1,585,483	-				-0.6
1,585,505	-				-0.5
1,585,508	+				+0.6
1,585,524	+				+0.0
1,585,586	+				-3.2
1,585,586	+				-1.6
1,585,586	+				-0.6
1,585,594	-				-0.3
1,585,596	+				-1.3
1,585,596	+				-0.1
1,585,604	-				+2.3
1,585,604	-				-0.7
1,585,604	-				-0.1
1,585,626	+				-1.2
1,585,626	+				+0.4
1,585,626	+				-1.0
1,585,683	+		CCNA_01478	0.11	+1.0
1,585,683	+		CCNA_01478	0.11	+0.4
1,585,683	+		CCNA_01478	0.11	+1.4
1,585,683	+		CCNA_01478	0.11	-1.8
1,585,685	+		CCNA_01478	0.12	-0.3
1,585,691	-		CCNA_01478	0.12	+0.2
1,585,691	-		CCNA_01478	0.12	-0.4
1,585,691	-		CCNA_01478	0.12	-1.5
1,585,723	-		CCNA_01478	0.17	+1.3
1,585,723	-		CCNA_01478	0.17	-1.6
1,585,741	+		CCNA_01478	0.19	-0.5
1,585,744	-		CCNA_01478	0.20	+0.8
1,585,815	-		CCNA_01478	0.29	-0.3
1,585,816	-		CCNA_01478	0.29	+0.6
1,585,859	-		CCNA_01478	0.35	-0.6
1,585,895	+		CCNA_01478	0.40	-1.4
1,585,903	-		CCNA_01478	0.41	+1.1
1,585,905	+		CCNA_01478	0.41	-0.4
1,585,911	+		CCNA_01478	0.42	-1.2
1,585,913	-		CCNA_01478	0.42	+0.1
1,585,936	-		CCNA_01478	0.45	-1.2
1,585,944	+		CCNA_01478	0.46	+0.3
1,586,002	-		CCNA_01478	0.54	-0.7
1,586,019	+		CCNA_01478	0.56	+0.1
1,586,029	+		CCNA_01478	0.58	-1.1
1,586,037	-		CCNA_01478	0.59	+1.0
1,586,096	+		CCNA_01478	0.67	-0.2
1,586,096	+		CCNA_01478	0.67	+0.7
1,586,113	-		CCNA_01478	0.69	-0.1
1,586,138	-		CCNA_01478	0.72	-0.2
1,586,142	+		CCNA_01478	0.73	-0.2
1,586,151	+		CCNA_01478	0.74	-1.2
1,586,151	+		CCNA_01478	0.74	-0.4
1,586,226	+		CCNA_01478	0.84	-0.4
1,586,227	-		CCNA_01478	0.84	+1.4
1,586,236	+		CCNA_01478	0.85	-0.1
1,586,276	+				-0.4
1,586,297	+				-1.7
1,586,299	+				-0.8
1,586,299	+				-0.5
1,586,323	-				-1.5
1,586,342	+				+0.4
1,586,348	+				-1.5
1,586,361	-				+0.1
1,586,361	-				+0.1
1,586,391	-				-0.8
1,586,404	-				-1.5
1,586,406	-				-1.5
1,586,413	-				+0.2
1,586,415	+				-0.1
1,586,510	+				+0.3
1,586,523	+				-1.3
1,586,531	-				-1.0
1,586,531	-				-0.4
1,586,531	-				+0.1
1,586,531	-				-0.6
1,586,554	+				-0.6
1,586,571	+				+0.1
1,586,594	+		CCNA_01479	0.10	+0.4
1,586,603	-		CCNA_01479	0.11	-1.7
1,586,662	+		CCNA_01479	0.14	-0.6
1,586,663	-		CCNA_01479	0.14	+0.6
1,586,715	-		CCNA_01479	0.16	-0.1
1,586,732	+		CCNA_01479	0.17	-0.1
1,586,738	+		CCNA_01479	0.17	+0.8
1,586,740	-		CCNA_01479	0.17	-0.4
1,586,751	-		CCNA_01479	0.18	-0.4
1,586,808	+		CCNA_01479	0.21	-1.5
1,586,826	+		CCNA_01479	0.22	+0.2
1,586,883	+		CCNA_01479	0.24	-0.7
1,586,891	-		CCNA_01479	0.25	-0.6
1,586,891	-		CCNA_01479	0.25	-0.3
1,586,951	+		CCNA_01479	0.28	+0.1
1,586,954	-		CCNA_01479	0.28	-0.7
1,586,994	+		CCNA_01479	0.30	+0.3
1,586,994	+		CCNA_01479	0.30	-0.2
1,587,002	-		CCNA_01479	0.30	-0.9
1,587,002	-		CCNA_01479	0.30	-0.8
1,587,015	+		CCNA_01479	0.31	-0.8
1,587,033	+		CCNA_01479	0.32	+1.4
1,587,051	+		CCNA_01479	0.32	+1.2
1,587,068	-		CCNA_01479	0.33	+0.2
1,587,096	+		CCNA_01479	0.35	+0.9
1,587,114	-		CCNA_01479	0.36	+1.1
1,587,141	+		CCNA_01479	0.37	-0.5
1,587,142	+		CCNA_01479	0.37	-0.4
1,587,171	-		CCNA_01479	0.38	-0.1
1,587,175	+		CCNA_01479	0.38	+1.6
1,587,176	+		CCNA_01479	0.39	-1.1
1,587,185	+		CCNA_01479	0.39	+1.5
1,587,205	-		CCNA_01479	0.40	-0.5
1,587,206	+		CCNA_01479	0.40	+1.6
1,587,219	+		CCNA_01479	0.41	+1.2
1,587,227	-		CCNA_01479	0.41	-0.3
1,587,236	+		CCNA_01479	0.41	+0.5
1,587,236	+		CCNA_01479	0.41	-0.8
1,587,236	+		CCNA_01479	0.41	-0.3
1,587,236	+		CCNA_01479	0.41	-0.7
1,587,236	+		CCNA_01479	0.41	-0.8
1,587,236	+		CCNA_01479	0.41	-0.0
1,587,236	+		CCNA_01479	0.41	+0.5
1,587,236	+		CCNA_01479	0.41	+0.0
1,587,244	-		CCNA_01479	0.42	+1.3
1,587,244	-		CCNA_01479	0.42	-1.4
1,587,244	-		CCNA_01479	0.42	-1.3
1,587,244	-		CCNA_01479	0.42	+0.6
1,587,244	-		CCNA_01479	0.42	-2.6
1,587,258	+		CCNA_01479	0.42	-0.1
1,587,288	+		CCNA_01479	0.44	+1.6
1,587,296	-		CCNA_01479	0.44	+0.5
1,587,303	+		CCNA_01479	0.45	+0.5
1,587,343	-		CCNA_01479	0.47	-0.9