Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01476

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,582,433	-		CCNA_01474	0.79	-0.2
1,582,627	+				-3.2
1,582,627	+				-0.6
1,582,635	-				+1.6
1,582,635	-				+0.0
1,582,635	-				-1.4
1,582,679	+		CCNA_01475	0.12	-0.2
1,582,727	+		CCNA_01475	0.20	-1.3
1,582,727	+		CCNA_01475	0.20	-0.5
1,582,735	-		CCNA_01475	0.21	-0.9
1,582,735	-		CCNA_01475	0.21	-2.0
1,582,746	-		CCNA_01475	0.23	-1.8
1,582,874	-		CCNA_01475	0.43	-1.1
1,582,905	-		CCNA_01475	0.47	-1.2
1,582,918	-		CCNA_01475	0.49	-0.9
1,582,920	+		CCNA_01475	0.50	-0.8
1,582,984	-		CCNA_01475	0.60	-1.4
1,582,989	-		CCNA_01475	0.60	-1.5
1,582,998	+		CCNA_01475	0.62	-0.3
1,582,998	+		CCNA_01475	0.62	-0.1
1,582,998	+		CCNA_01475	0.62	-0.1
1,582,998	+		CCNA_01475	0.62	+0.8
1,583,021	-		CCNA_01475	0.65	-0.4
1,583,049	-		CCNA_01475	0.70	+1.6
1,583,126	+		CCNA_01475	0.82	+0.2
1,583,128	-		CCNA_01475	0.82	-0.0
1,583,149	-		CCNA_01475	0.85	-1.4
1,583,165	+		CCNA_01475	0.88	+0.6
1,583,186	+				-0.2
1,583,186	+				+0.3
1,583,194	-				-0.4
1,583,197	+				+1.3
1,583,266	+				-0.1
1,583,280	-				-2.0
1,583,331	-				+0.0
1,583,332	-				-0.8
1,583,362	+				+1.6
1,583,369	-				-0.4
1,583,377	+				+0.3
1,583,377	+				-1.7
1,583,377	+				-0.4
1,583,385	-				+1.6
1,583,390	+				-1.5
1,583,435	-				-0.9
1,583,438	+				-1.0
1,583,446	-				-0.4
1,583,448	+				-1.8
1,583,543	+		CCNA_01476	0.15	-2.2
1,583,543	+		CCNA_01476	0.15	-1.2
1,583,543	+		CCNA_01476	0.15	-1.8
1,583,550	+		CCNA_01476	0.16	-0.8
1,583,551	-		CCNA_01476	0.16	+1.0
1,583,551	-		CCNA_01476	0.16	+0.3
1,583,558	+		CCNA_01476	0.17	+0.3
1,583,560	-		CCNA_01476	0.18	+0.1
1,583,565	-		CCNA_01476	0.18	-1.1
1,583,649	-		CCNA_01476	0.29	+0.6
1,583,658	+		CCNA_01476	0.30	+0.6
1,583,666	-		CCNA_01476	0.31	-0.2
1,583,673	+		CCNA_01476	0.32	-0.1
1,583,683	-		CCNA_01476	0.34	-0.7
1,583,688	-		CCNA_01476	0.34	-0.2
1,583,689	+		CCNA_01476	0.34	+0.2
1,583,699	+		CCNA_01476	0.36	+0.5
1,583,735	+		CCNA_01476	0.40	-0.6
1,583,743	-		CCNA_01476	0.41	-3.3
1,583,769	-		CCNA_01476	0.45	+0.3
1,583,770	-		CCNA_01476	0.45	-1.0
1,583,770	-		CCNA_01476	0.45	+0.6
1,583,774	+		CCNA_01476	0.45	-0.6
1,583,774	+		CCNA_01476	0.45	-0.2
1,583,774	+		CCNA_01476	0.45	-0.7
1,583,829	+		CCNA_01476	0.53	-1.2
1,583,842	+		CCNA_01476	0.54	-0.8
1,583,865	+		CCNA_01476	0.57	-0.7
1,583,875	+		CCNA_01476	0.59	+0.6
1,583,875	+		CCNA_01476	0.59	-1.2
1,583,875	+		CCNA_01476	0.59	+2.1
1,583,883	-		CCNA_01476	0.60	-1.4
1,583,884	+		CCNA_01476	0.60	-1.1
1,583,894	+		CCNA_01476	0.61	-0.7
1,583,902	-		CCNA_01476	0.62	-1.8
1,583,986	+		CCNA_01476	0.73	-0.6
1,583,989	+		CCNA_01476	0.73	-0.7
1,584,017	+		CCNA_01476	0.77	-0.4
1,584,055	-		CCNA_01476	0.82	-1.8
1,584,058	-		CCNA_01476	0.82	-1.0
1,584,070	+		CCNA_01476	0.84	-0.4
1,584,070	+		CCNA_01476	0.84	-1.5
1,584,078	-		CCNA_01476	0.85	-1.5
1,584,078	-		CCNA_01476	0.85	-2.0
1,584,098	-		CCNA_01476	0.88	+0.4
1,584,138	-				-0.7
1,584,141	+				-0.7
1,584,141	+				-2.6
1,584,195	-				+0.9
1,584,244	-				+1.1
1,584,252	+				-0.1
1,584,280	-				+0.1
1,584,310	+				+0.4
1,584,310	+				+0.3
1,584,383	+		CCNA_01477	0.11	+0.7
1,584,396	+		CCNA_01477	0.12	-0.0
1,584,434	+		CCNA_01477	0.14	-0.4
1,584,466	+		CCNA_01477	0.17	-1.5
1,584,466	+		CCNA_01477	0.17	-0.8
1,584,466	+		CCNA_01477	0.17	-0.7
1,584,467	-		CCNA_01477	0.17	-1.0
1,584,467	-		CCNA_01477	0.17	+0.2
1,584,484	-		CCNA_01477	0.18	+0.2
1,584,495	+		CCNA_01477	0.19	-0.5
1,584,587	+		CCNA_01477	0.26	+2.1
1,584,623	+		CCNA_01477	0.28	+0.5
1,584,731	-		CCNA_01477	0.36	+0.5
1,584,739	+		CCNA_01477	0.37	+1.4
1,584,754	+		CCNA_01477	0.38	-0.8
1,584,768	-		CCNA_01477	0.39	+0.7
1,584,779	+		CCNA_01477	0.40	-1.3
1,584,837	+		CCNA_01477	0.44	-1.0
1,584,874	-		CCNA_01477	0.47	-1.0
1,584,899	+		CCNA_01477	0.48	-2.9
1,584,951	+		CCNA_01477	0.52	-2.2
1,584,951	+		CCNA_01477	0.52	-1.8
1,585,019	-		CCNA_01477	0.57	-0.4
1,585,062	+		CCNA_01477	0.60	-1.2
1,585,130	-		CCNA_01477	0.65	-0.8
1,585,164	+		CCNA_01477	0.68	-1.0