Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01445

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,556,713	-		CCNA_01444	0.56	+0.0
1,556,733	+		CCNA_01444	0.57	+1.7
1,556,741	-		CCNA_01444	0.57	-0.2
1,556,744	+		CCNA_01444	0.57	-0.5
1,556,784	+		CCNA_01444	0.59	-1.5
1,556,814	-		CCNA_01444	0.61	-1.7
1,556,837	+		CCNA_01444	0.62	-0.6
1,556,838	-		CCNA_01444	0.62	-0.8
1,556,855	-		CCNA_01444	0.63	-0.6
1,556,865	-		CCNA_01444	0.63	-0.5
1,556,955	-		CCNA_01444	0.68	-0.2
1,556,977	+		CCNA_01444	0.69	+0.8
1,557,000	+		CCNA_01444	0.70	+0.1
1,557,000	+		CCNA_01444	0.70	-2.0
1,557,008	-		CCNA_01444	0.70	+1.6
1,557,008	-		CCNA_01444	0.70	-1.1
1,557,032	-		CCNA_01444	0.71	-0.1
1,557,044	+		CCNA_01444	0.72	-1.7
1,557,137	-		CCNA_01444	0.77	+0.1
1,557,151	-		CCNA_01444	0.77	+0.6
1,557,156	+		CCNA_01444	0.78	-0.9
1,557,215	+		CCNA_01444	0.81	-2.2
1,557,258	+		CCNA_01444	0.83	-0.5
1,557,275	+		CCNA_01444	0.84	-0.3
1,557,283	-		CCNA_01444	0.84	+0.1
1,557,307	-		CCNA_01444	0.85	-0.4
1,557,342	+		CCNA_01444	0.87	+0.6
1,557,359	-		CCNA_01444	0.88	+1.3
1,557,410	-				+0.2
1,557,470	-				-0.4
1,557,472	+				-1.4
1,557,483	+				+0.0
1,557,491	-				+0.0
1,557,510	+				-1.2
1,557,510	+				+1.4
1,557,510	+				-0.1
1,557,518	-				+0.8
1,557,518	-				-1.2
1,557,518	-				-0.5
1,557,540	+				+0.5
1,557,548	-				+0.1
1,557,591	+				-0.5
1,557,602	+				-0.5
1,557,624	+				-0.2
1,557,738	-				-0.7
1,557,744	-		CCNA_01445	0.11	-0.5
1,557,782	+		CCNA_01445	0.19	+0.2
1,557,790	-		CCNA_01445	0.21	+0.6
1,557,840	+		CCNA_01445	0.32	+1.0
1,557,840	+		CCNA_01445	0.32	+0.4
1,557,840	+		CCNA_01445	0.32	+0.2
1,557,848	-		CCNA_01445	0.34	-1.4
1,557,848	-		CCNA_01445	0.34	-1.1
1,557,848	-		CCNA_01445	0.34	+0.0
1,557,904	+		CCNA_01445	0.47	-0.0
1,557,923	-		CCNA_01445	0.51	+0.6
1,557,928	-		CCNA_01445	0.52	-0.8
1,557,975	-		CCNA_01445	0.63	-2.0
1,557,993	+		CCNA_01445	0.67	+1.3
1,558,015	-		CCNA_01445	0.72	+0.2
1,558,042	+		CCNA_01445	0.78	+1.0
1,558,117	+				+0.6
1,558,122	+				+1.1
1,558,182	+				+0.5
1,558,191	-				+0.2
1,558,191	-				+0.2
1,558,197	-				-1.1
1,558,202	-				+0.4
1,558,241	-				-0.4
1,558,307	-				-0.1
1,558,349	+				+0.1
1,558,362	-				+0.2
1,558,422	+		CCNA_01446	0.14	+0.7
1,558,422	+		CCNA_01446	0.14	+0.4
1,558,422	+		CCNA_01446	0.14	-0.1
1,558,422	+		CCNA_01446	0.14	-0.6
1,558,429	-		CCNA_01446	0.15	-0.6
1,558,465	-		CCNA_01446	0.18	-1.3
1,558,473	+		CCNA_01446	0.19	+0.4
1,558,535	+		CCNA_01446	0.24	-0.4
1,558,547	+		CCNA_01446	0.25	+0.0
1,558,579	+		CCNA_01446	0.27	-0.3
1,558,615	+		CCNA_01446	0.30	+0.3
1,558,615	+		CCNA_01446	0.30	-0.1
1,558,615	+		CCNA_01446	0.30	+0.6
1,558,618	-		CCNA_01446	0.30	-1.6
1,558,620	+		CCNA_01446	0.31	+0.6
1,558,620	+		CCNA_01446	0.31	-0.5
1,558,686	+		CCNA_01446	0.36	+0.2
1,558,749	-		CCNA_01446	0.41	-0.7
1,558,769	-		CCNA_01446	0.43	-0.1
1,558,770	+		CCNA_01446	0.43	+0.4
1,558,784	-		CCNA_01446	0.44	-0.1
1,558,785	+		CCNA_01446	0.44	-0.1
1,558,793	-		CCNA_01446	0.45	-3.7
1,558,795	+		CCNA_01446	0.45	-0.3
1,558,796	+		CCNA_01446	0.45	+0.8
1,558,932	-		CCNA_01446	0.56	-0.6
1,558,956	+		CCNA_01446	0.58	-0.6
1,558,956	+		CCNA_01446	0.58	+0.5
1,558,964	-		CCNA_01446	0.59	-1.4
1,558,964	-		CCNA_01446	0.59	-1.4
1,558,964	-		CCNA_01446	0.59	-3.3
1,558,964	-		CCNA_01446	0.59	+0.3
1,558,969	+		CCNA_01446	0.59	-0.6
1,558,970	-		CCNA_01446	0.59	+0.0
1,558,990	+		CCNA_01446	0.61	-1.0
1,559,048	-		CCNA_01446	0.66	-0.4
1,559,079	-		CCNA_01446	0.68	-0.8
1,559,092	+		CCNA_01446	0.69	+0.3
1,559,092	+		CCNA_01446	0.69	+0.1
1,559,092	+		CCNA_01446	0.69	+0.1
1,559,100	-		CCNA_01446	0.70	-0.4
1,559,100	-		CCNA_01446	0.70	-0.8
1,559,100	-		CCNA_01446	0.70	+1.0
1,559,100	-		CCNA_01446	0.70	+0.0
1,559,100	-		CCNA_01446	0.70	+0.3
1,559,104	+		CCNA_01446	0.70	+1.0
1,559,109	+		CCNA_01446	0.71	-0.5
1,559,110	-		CCNA_01446	0.71	+0.3