Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01355

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,468,437	+		CCNA_01354	0.23	+0.3
1,468,437	+		CCNA_01354	0.23	+0.0
1,468,445	-		CCNA_01354	0.24	-1.7
1,468,458	+		CCNA_01354	0.25	-1.4
1,468,458	+		CCNA_01354	0.25	-0.8
1,468,461	-		CCNA_01354	0.25	-0.5
1,468,466	-		CCNA_01354	0.26	+1.0
1,468,481	+		CCNA_01354	0.27	-0.8
1,468,496	-		CCNA_01354	0.29	-0.1
1,468,501	-		CCNA_01354	0.29	+0.2
1,468,529	-		CCNA_01354	0.32	-0.5
1,468,544	-		CCNA_01354	0.34	-1.7
1,468,544	-		CCNA_01354	0.34	-0.1
1,468,557	+		CCNA_01354	0.35	-1.1
1,468,572	-		CCNA_01354	0.36	+0.6
1,468,573	+		CCNA_01354	0.37	-0.4
1,468,581	-		CCNA_01354	0.37	+1.5
1,468,626	+		CCNA_01354	0.42	-0.2
1,468,626	+		CCNA_01354	0.42	-1.0
1,468,650	+		CCNA_01354	0.44	+0.2
1,468,650	+		CCNA_01354	0.44	-1.0
1,468,658	-		CCNA_01354	0.45	+0.2
1,468,670	+		CCNA_01354	0.46	-0.1
1,468,687	+		CCNA_01354	0.48	-0.1
1,468,715	+		CCNA_01354	0.51	-1.3
1,468,759	-		CCNA_01354	0.55	+0.4
1,468,766	-		CCNA_01354	0.56	-0.4
1,468,768	+		CCNA_01354	0.56	-1.0
1,468,776	-		CCNA_01354	0.57	+0.9
1,468,802	-		CCNA_01354	0.60	-0.2
1,468,849	+		CCNA_01354	0.65	+0.3
1,468,858	-		CCNA_01354	0.65	-0.5
1,468,866	-		CCNA_01354	0.66	+1.4
1,468,867	+		CCNA_01354	0.66	+0.2
1,468,881	+		CCNA_01354	0.68	-0.6
1,468,907	+		CCNA_01354	0.70	+0.6
1,468,907	+		CCNA_01354	0.70	-0.2
1,468,908	+		CCNA_01354	0.71	-0.1
1,468,910	-		CCNA_01354	0.71	-0.1
1,468,910	-		CCNA_01354	0.71	+0.1
1,468,910	-		CCNA_01354	0.71	+0.3
1,468,927	+		CCNA_01354	0.72	+0.8
1,468,940	-		CCNA_01354	0.74	-0.0
1,468,958	+		CCNA_01354	0.76	+0.5
1,469,025	+		CCNA_01354	0.82	+0.2
1,469,025	+		CCNA_01354	0.82	-0.5
1,469,025	+		CCNA_01354	0.82	-0.5
1,469,033	-		CCNA_01354	0.83	+0.3
1,469,033	-		CCNA_01354	0.83	-0.4
1,469,043	-		CCNA_01354	0.84	+0.2
1,469,205	+				+0.3
1,469,231	-				-0.4
1,469,311	+				-0.0
1,469,370	+				+0.2
1,469,406	-				+0.2
1,469,413	+				+0.2
1,469,480	-		CCNA_01355	0.13	-0.9
1,469,549	+		CCNA_01355	0.21	+0.7
1,469,559	-		CCNA_01355	0.22	-1.3
1,469,603	+		CCNA_01355	0.27	+1.0
1,469,640	+		CCNA_01355	0.31	-0.8
1,469,640	+		CCNA_01355	0.31	+0.3
1,469,640	+		CCNA_01355	0.31	-0.1
1,469,640	+		CCNA_01355	0.31	+0.4
1,469,640	+		CCNA_01355	0.31	+1.3
1,469,650	+		CCNA_01355	0.32	+0.5
1,469,653	-		CCNA_01355	0.33	+0.4
1,469,658	-		CCNA_01355	0.33	-0.9
1,469,658	-		CCNA_01355	0.33	-0.0
1,469,658	-		CCNA_01355	0.33	+1.6
1,469,699	+		CCNA_01355	0.38	-0.2
1,469,707	-		CCNA_01355	0.39	-0.7
1,469,709	+		CCNA_01355	0.39	-0.8
1,469,745	-		CCNA_01355	0.43	-1.5
1,469,760	+		CCNA_01355	0.45	-0.0
1,469,760	+		CCNA_01355	0.45	+0.1
1,469,761	-		CCNA_01355	0.45	-1.3
1,469,901	+		CCNA_01355	0.61	+0.9
1,469,919	-		CCNA_01355	0.63	+0.3
1,469,920	-		CCNA_01355	0.63	+1.1
1,469,995	+		CCNA_01355	0.72	+0.1
1,470,010	-		CCNA_01355	0.74	-1.2
1,470,030	+		CCNA_01355	0.76	+0.6
1,470,047	+		CCNA_01355	0.78	+1.2
1,470,155	+				-0.6
1,470,155	-				-0.5
1,470,160	+				-1.8
1,470,160	+				-0.4
1,470,164	+				-0.5
1,470,165	+				-0.5
1,470,165	+				+0.6
1,470,173	-				-0.2
1,470,178	-				-0.3
1,470,260	-				-0.3
1,470,335	+				+0.3
1,470,380	-				-0.3
1,470,389	+				-0.2
1,470,389	+				+0.9
1,470,389	+				-0.2
1,470,397	-				+0.3
1,470,397	-				-0.3
1,470,397	-				-1.1
1,470,462	-				-1.2
1,470,544	+				-0.6
1,470,544	+				-0.3
1,470,552	-				-1.6
1,470,563	-		CCNA_01356	0.10	-0.0
1,470,563	-		CCNA_01356	0.10	+1.4
1,470,568	-		CCNA_01356	0.10	-0.3
1,470,585	-		CCNA_01356	0.11	+0.2
1,470,630	+		CCNA_01356	0.13	+0.7
1,470,638	-		CCNA_01356	0.14	-1.0
1,470,714	-		CCNA_01356	0.18	-1.0
1,470,714	-		CCNA_01356	0.18	-0.6
1,470,724	-		CCNA_01356	0.18	-1.6
1,470,728	+		CCNA_01356	0.19	-1.2
1,470,728	+		CCNA_01356	0.19	-0.8
1,470,753	+		CCNA_01356	0.20	+0.8
1,470,753	+		CCNA_01356	0.20	+0.3
1,470,763	+		CCNA_01356	0.20	+0.2
1,470,773	+		CCNA_01356	0.21	+0.9
1,470,778	+		CCNA_01356	0.21	-0.7
1,470,778	+		CCNA_01356	0.21	+0.3
1,470,778	+		CCNA_01356	0.21	+0.6
1,470,786	-		CCNA_01356	0.22	-1.0
1,470,786	-		CCNA_01356	0.22	-0.8
1,470,786	-		CCNA_01356	0.22	-1.1
1,470,799	-		CCNA_01356	0.22	-0.8
1,470,807	+		CCNA_01356	0.23	+0.6
1,470,807	+		CCNA_01356	0.23	-0.2
1,470,813	+		CCNA_01356	0.23	-1.2
1,470,827	+		CCNA_01356	0.24	-0.4
1,470,827	+		CCNA_01356	0.24	+1.6
1,470,890	+		CCNA_01356	0.27	-0.4
1,470,903	-		CCNA_01356	0.28	+1.0
1,470,974	-		CCNA_01356	0.31	+0.4
1,470,974	-		CCNA_01356	0.31	+1.6
1,470,976	+		CCNA_01356	0.31	+0.3
1,471,027	-		CCNA_01356	0.34	+0.5
1,471,068	+		CCNA_01356	0.36	+0.3
1,471,087	+		CCNA_01356	0.37	+2.0
1,471,087	-		CCNA_01356	0.37	-2.2
1,471,092	+		CCNA_01356	0.37	-0.0
1,471,103	-		CCNA_01356	0.38	-1.5
1,471,107	+		CCNA_01356	0.38	-0.9
1,471,152	+		CCNA_01356	0.41	+0.1
1,471,175	+		CCNA_01356	0.42	+0.5
1,471,183	-		CCNA_01356	0.42	+0.3
1,471,189	-		CCNA_01356	0.42	-0.8
1,471,193	+		CCNA_01356	0.43	+0.4
1,471,229	+		CCNA_01356	0.45	-0.5