Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01250

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,376,396	+		CCNA_01248	0.63	+0.7
1,376,435	+		CCNA_01248	0.69	+0.8
1,376,448	-		CCNA_01248	0.72	-1.4
1,376,463	-		CCNA_01248	0.74	-0.4
1,376,463	-		CCNA_01248	0.74	-0.0
1,376,529	-		CCNA_01248	0.84	-0.4
1,376,530	-		CCNA_01248	0.84	+0.2
1,376,570	-				-0.1
1,376,585	+				+0.7
1,376,593	-				-1.6
1,376,610	-				-0.2
1,376,612	-				+0.0
1,376,688	-				-1.4
1,376,725	+		CCNA_01249	0.11	-0.1
1,376,743	-		CCNA_01249	0.14	-0.8
1,376,745	-		CCNA_01249	0.14	-3.5
1,376,798	+		CCNA_01249	0.20	-0.3
1,376,813	-		CCNA_01249	0.22	-1.1
1,376,930	+		CCNA_01249	0.37	-0.2
1,376,935	+		CCNA_01249	0.37	-0.8
1,376,995	-		CCNA_01249	0.45	+0.2
1,376,996	+		CCNA_01249	0.45	-0.6
1,377,020	-		CCNA_01249	0.48	-1.5
1,377,070	+		CCNA_01249	0.54	+0.0
1,377,070	+		CCNA_01249	0.54	-0.7
1,377,078	-		CCNA_01249	0.55	-1.3
1,377,078	-		CCNA_01249	0.55	-1.2
1,377,114	+		CCNA_01249	0.60	-0.6
1,377,114	+		CCNA_01249	0.60	-0.2
1,377,122	-		CCNA_01249	0.61	-1.1
1,377,122	-		CCNA_01249	0.61	-0.1
1,377,323	+		CCNA_01249	0.86	+1.4
1,377,323	+		CCNA_01249	0.86	+0.7
1,377,331	-		CCNA_01249	0.86	-0.2
1,377,354	+		CCNA_01249	0.89	-0.7
1,377,389	+				-0.4
1,377,421	+				+0.2
1,377,421	+				+1.4
1,377,429	-				+1.0
1,377,474	-				-0.7
1,377,490	+		CCNA_01250	0.10	+0.1
1,377,490	+		CCNA_01250	0.10	-0.3
1,377,511	-		CCNA_01250	0.12	-0.4
1,377,543	+		CCNA_01250	0.15	+0.2
1,377,587	-		CCNA_01250	0.20	+0.8
1,377,598	-		CCNA_01250	0.21	+0.6
1,377,608	-		CCNA_01250	0.22	+0.2
1,377,616	+		CCNA_01250	0.22	-0.7
1,377,639	-		CCNA_01250	0.25	-0.2
1,377,644	-		CCNA_01250	0.25	-1.2
1,377,652	+		CCNA_01250	0.26	+1.3
1,377,665	-		CCNA_01250	0.27	-0.5
1,377,858	+		CCNA_01250	0.46	+0.6
1,377,863	+		CCNA_01250	0.46	-0.8
1,377,895	+		CCNA_01250	0.49	+0.3
1,377,912	-		CCNA_01250	0.51	-0.3
1,377,941	+		CCNA_01250	0.54	+0.2
1,377,949	+		CCNA_01250	0.54	+0.0
1,377,957	-		CCNA_01250	0.55	-1.4
1,377,968	+		CCNA_01250	0.56	-0.3
1,377,973	+		CCNA_01250	0.57	-0.1
1,377,980	+		CCNA_01250	0.57	+0.6
1,377,981	-		CCNA_01250	0.58	-2.1
1,378,052	+		CCNA_01250	0.64	+0.3
1,378,052	+		CCNA_01250	0.64	+0.6
1,378,057	+		CCNA_01250	0.65	+0.6
1,378,057	+		CCNA_01250	0.65	-0.4
1,378,065	-		CCNA_01250	0.66	-1.6
1,378,065	-		CCNA_01250	0.66	-0.1
1,378,067	+		CCNA_01250	0.66	+0.1
1,378,067	+		CCNA_01250	0.66	-0.4
1,378,127	+		CCNA_01250	0.72	+0.8
1,378,155	-		CCNA_01250	0.74	-0.3
1,378,230	+		CCNA_01250	0.81	+0.9
1,378,238	-		CCNA_01250	0.82	-0.8
1,378,238	-		CCNA_01250	0.82	-2.3
1,378,254	+		CCNA_01250	0.84	-0.3
1,378,272	+		CCNA_01250	0.85	-0.1
1,378,280	-		CCNA_01250	0.86	-0.5
1,378,336	-				+0.6
1,378,342	-				-2.5
1,378,463	+				-1.3
1,378,505	-		CCNA_01251	0.11	-0.6
1,378,556	+		CCNA_01251	0.18	-2.0
1,378,567	+		CCNA_01251	0.19	-0.2
1,378,624	-		CCNA_01251	0.27	-0.6
1,378,686	+		CCNA_01251	0.35	-1.4
1,378,693	-		CCNA_01251	0.36	-1.5
1,378,726	+		CCNA_01251	0.40	-0.2
1,378,761	+		CCNA_01251	0.45	-0.6
1,378,812	+		CCNA_01251	0.52	-0.7
1,378,820	-		CCNA_01251	0.53	+0.3
1,378,820	-		CCNA_01251	0.53	-0.4
1,378,820	-		CCNA_01251	0.53	-1.0
1,378,823	+		CCNA_01251	0.53	+0.1
1,378,931	+		CCNA_01251	0.67	-0.3
1,378,936	+		CCNA_01251	0.68	+0.4
1,378,944	-		CCNA_01251	0.69	-0.5
1,378,959	+		CCNA_01251	0.71	-0.0
1,379,000	+		CCNA_01251	0.77	-0.1
1,379,004	-		CCNA_01251	0.77	-0.0
1,379,055	-		CCNA_01251	0.84	-0.5
1,379,084	+		CCNA_01251	0.88	-1.7
1,379,102	-				+0.7
1,379,132	-				+0.2
1,379,187	-				+0.2
1,379,214	-				+0.2
1,379,217	-				+0.5
1,379,224	+				-1.1
1,379,250	-				+0.8
1,379,251	+				+0.3
1,379,259	-				+0.5
1,379,265	-				+0.7
1,379,301	+				-0.4
1,379,316	-				+0.2
1,379,378	+				+0.2
1,379,392	-		CCNA_01252	0.10	+0.4
1,379,399	+		CCNA_01252	0.10	+0.2
1,379,407	-		CCNA_01252	0.11	-1.1