Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01070

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,175,519	-		CCNA_01069	0.80	-1.1
1,175,629	+		CCNA_01069	0.88	+1.8
1,175,652	+		CCNA_01069	0.89	+0.3
1,175,652	+		CCNA_01069	0.89	-0.1
1,175,660	-		CCNA_01069	0.90	+0.2
1,175,674	+				+0.3
1,175,735	-				-0.0
1,175,790	+				+0.2
1,176,089	+				+0.2
1,176,152	+				+0.6
1,176,160	-				-1.6
1,176,236	+				+0.0
1,176,238	-				+0.2
1,176,279	+				+0.1
1,176,343	-				+0.7
1,176,387	-				-0.5
1,176,480	+				+0.6
1,176,544	+				-0.1
1,176,544	+				+0.3
1,176,549	+				-0.5
1,176,549	+				+0.8
1,176,549	+				-0.5
1,176,549	+				-0.5
1,176,549	+				+0.6
1,176,552	-				+1.2
1,176,552	-				+0.1
1,176,557	-				-1.2
1,176,557	-				+0.2
1,176,557	-				-0.2
1,176,557	-				-1.0
1,176,557	-				+0.9
1,176,557	-				-1.7
1,176,562	-				+0.5
1,176,619	+		CCNA_01070	0.15	+0.1
1,176,646	-		CCNA_01070	0.18	+0.3
1,176,658	+		CCNA_01070	0.20	-1.2
1,176,685	-		CCNA_01070	0.24	-0.1
1,176,725	+		CCNA_01070	0.29	-0.9
1,176,779	-		CCNA_01070	0.36	+0.1
1,176,801	-		CCNA_01070	0.39	-0.3
1,176,879	-		CCNA_01070	0.49	+0.2
1,176,900	-		CCNA_01070	0.52	+0.0
1,176,906	+		CCNA_01070	0.53	-0.5
1,176,944	+		CCNA_01070	0.58	-0.9
1,176,946	-		CCNA_01070	0.58	+0.8
1,176,963	+		CCNA_01070	0.61	-1.5
1,176,976	+		CCNA_01070	0.62	+0.7
1,176,992	+		CCNA_01070	0.65	-0.8
1,177,005	-		CCNA_01070	0.66	+0.4
1,177,138	+		CCNA_01070	0.84	-0.3
1,177,143	-		CCNA_01070	0.85	+0.5
1,177,154	+		CCNA_01070	0.86	+0.1
1,177,156	+		CCNA_01070	0.86	-0.1
1,177,162	-		CCNA_01070	0.87	-0.1
1,177,162	-		CCNA_01070	0.87	+0.4
1,177,164	-		CCNA_01070	0.87	-1.2
1,177,171	+		CCNA_01070	0.88	+0.2
1,177,171	+		CCNA_01070	0.88	-0.8
1,177,174	-		CCNA_01070	0.89	+0.7
1,177,179	-		CCNA_01070	0.89	+0.4
1,177,184	+				-0.4
1,177,219	+				-2.2
1,177,227	-				-0.8
1,177,260	-				+1.5
1,177,264	+				+0.0
1,177,264	+				-0.4
1,177,264	+				-1.7
1,177,264	+				+0.5
1,177,265	+				-0.2
1,177,265	+				-1.2
1,177,272	-				-0.1
1,177,297	+				-0.5
1,177,353	+				+0.0
1,177,353	+				-0.0
1,177,353	+				+0.2
1,177,353	+				-0.1
1,177,353	+				-0.2
1,177,356	-				+0.4
1,177,361	-				-0.2
1,177,361	-				+0.2
1,177,361	-				-0.4
1,177,361	-				-0.4
1,177,361	-				+0.1
1,177,361	-				-0.1
1,177,361	-				+0.2
1,177,361	-				-0.1
1,177,361	-				+0.5
1,177,366	-				-1.0
1,177,399	-				-0.8
1,177,442	-				+0.0
1,177,455	-		CCNA_01071	0.11	-0.0
1,177,467	-		CCNA_01071	0.12	-1.6
1,177,471	+		CCNA_01071	0.12	+0.1
1,177,471	+		CCNA_01071	0.12	-0.4
1,177,471	+		CCNA_01071	0.12	+0.8
1,177,471	+		CCNA_01071	0.12	-1.1
1,177,471	+		CCNA_01071	0.12	+1.4
1,177,471	+		CCNA_01071	0.12	-0.0
1,177,471	+		CCNA_01071	0.12	-1.0
1,177,471	+		CCNA_01071	0.12	-0.3
1,177,471	+		CCNA_01071	0.12	+0.8
1,177,472	-		CCNA_01071	0.12	+0.1
1,177,472	-		CCNA_01071	0.12	-0.4
1,177,476	+		CCNA_01071	0.12	-0.7
1,177,476	+		CCNA_01071	0.12	-0.7
1,177,476	+		CCNA_01071	0.12	-0.3
1,177,476	+		CCNA_01071	0.12	-1.5
1,177,477	-		CCNA_01071	0.12	-0.3
1,177,479	-		CCNA_01071	0.13	-0.6
1,177,479	-		CCNA_01071	0.13	-0.8
1,177,479	-		CCNA_01071	0.13	-0.2
1,177,479	-		CCNA_01071	0.13	-0.5
1,177,479	-		CCNA_01071	0.13	-0.5
1,177,484	-		CCNA_01071	0.13	-0.2
1,177,484	-		CCNA_01071	0.13	-0.0
1,177,484	-		CCNA_01071	0.13	-0.4
1,177,484	-		CCNA_01071	0.13	+0.3
1,177,500	+		CCNA_01071	0.14	+0.4
1,177,522	+		CCNA_01071	0.16	-1.1
1,177,530	-		CCNA_01071	0.16	+0.1
1,177,537	-		CCNA_01071	0.17	+0.3
1,177,544	+		CCNA_01071	0.17	-1.0
1,177,546	+		CCNA_01071	0.17	-0.0
1,177,546	+		CCNA_01071	0.17	-0.7
1,177,554	-		CCNA_01071	0.18	+0.1
1,177,562	-		CCNA_01071	0.18	+0.0
1,177,578	+		CCNA_01071	0.19	-2.8
1,177,578	+		CCNA_01071	0.19	-1.3
1,177,586	-		CCNA_01071	0.20	+1.2
1,177,586	-		CCNA_01071	0.20	+0.3
1,177,597	-		CCNA_01071	0.21	-0.3
1,177,636	-		CCNA_01071	0.24	-0.3
1,177,641	+		CCNA_01071	0.24	-0.9
1,177,641	+		CCNA_01071	0.24	+0.6
1,177,755	+		CCNA_01071	0.32	-0.1
1,177,764	+		CCNA_01071	0.32	+0.2
1,177,765	-		CCNA_01071	0.32	+0.9
1,177,818	+		CCNA_01071	0.36	-0.8
1,177,826	+		CCNA_01071	0.37	+0.6
1,177,826	-		CCNA_01071	0.37	-0.2
1,177,926	-		CCNA_01071	0.44	-0.6
1,177,952	+		CCNA_01071	0.46	-3.2
1,177,957	+		CCNA_01071	0.46	-0.0
1,177,957	+		CCNA_01071	0.46	-0.5
1,177,965	-		CCNA_01071	0.46	+0.1
1,177,965	-		CCNA_01071	0.46	+1.2
1,177,965	-		CCNA_01071	0.46	+0.8
1,177,965	-		CCNA_01071	0.46	-0.5
1,177,985	-		CCNA_01071	0.48	+1.3
1,178,041	-		CCNA_01071	0.52	+0.2
1,178,090	+		CCNA_01071	0.55	+1.1
1,178,090	+		CCNA_01071	0.55	+0.2
1,178,090	+		CCNA_01071	0.55	-0.2
1,178,090	+		CCNA_01071	0.55	-2.7
1,178,090	+		CCNA_01071	0.55	+0.6
1,178,094	-		CCNA_01071	0.55	+0.3
1,178,098	-		CCNA_01071	0.56	-0.4
1,178,098	-		CCNA_01071	0.56	+0.4
1,178,098	-		CCNA_01071	0.56	+0.2
1,178,098	-		CCNA_01071	0.56	-0.7
1,178,098	-		CCNA_01071	0.56	-0.2
1,178,098	-		CCNA_01071	0.56	-0.1
1,178,098	-		CCNA_01071	0.56	-0.1
1,178,107	+		CCNA_01071	0.56	-0.9
1,178,115	-		CCNA_01071	0.57	+0.1
1,178,132	-		CCNA_01071	0.58	-0.4
1,178,155	+		CCNA_01071	0.60	-0.9
1,178,163	-		CCNA_01071	0.60	-0.4