Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_00968

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,041,392	+				+0.4
1,041,417	+				-0.5
1,041,434	-				+0.0
1,041,435	-				-0.4
1,041,468	+		CCNA_00967	0.11	-0.6
1,041,473	+		CCNA_00967	0.12	-0.5
1,041,473	+		CCNA_00967	0.12	+1.1
1,041,473	+		CCNA_00967	0.12	+0.1
1,041,495	+		CCNA_00967	0.15	-0.1
1,041,503	-		CCNA_00967	0.17	-0.9
1,041,514	-		CCNA_00967	0.19	+0.2
1,041,533	-		CCNA_00967	0.22	+0.2
1,041,570	-		CCNA_00967	0.28	-0.2
1,041,580	-		CCNA_00967	0.29	+0.3
1,041,585	-		CCNA_00967	0.30	+1.1
1,041,585	-		CCNA_00967	0.30	+0.0
1,041,623	-		CCNA_00967	0.36	-0.2
1,041,655	+		CCNA_00967	0.41	+0.1
1,041,698	-		CCNA_00967	0.48	+0.1
1,041,716	-		CCNA_00967	0.51	+0.3
1,041,736	+		CCNA_00967	0.54	-1.0
1,041,744	-		CCNA_00967	0.56	-0.0
1,041,765	+		CCNA_00967	0.59	-1.1
1,041,773	-		CCNA_00967	0.60	-0.1
1,041,773	-		CCNA_00967	0.60	-0.0
1,041,773	-		CCNA_00967	0.60	+0.3
1,041,822	+		CCNA_00967	0.68	-1.5
1,041,928	+		CCNA_00967	0.85	-2.1
1,041,981	+				+1.0
1,041,981	+				+0.2
1,041,996	+				+0.1
1,041,996	+				-0.4
1,041,996	+				-0.1
1,041,996	+				+0.3
1,042,004	-				-0.2
1,042,004	-				+0.2
1,042,006	+				-0.5
1,042,006	+				-0.6
1,042,024	-				+0.8
1,042,024	-				-0.2
1,042,105	+				+0.0
1,042,105	+				-0.6
1,042,105	+				-0.9
1,042,105	+				+0.9
1,042,105	+				+1.0
1,042,105	+				+0.5
1,042,113	-				-0.6
1,042,113	-				-1.3
1,042,113	-				-1.3
1,042,113	-				-2.5
1,042,166	+				+0.5
1,042,278	+				+2.5
1,042,278	+				+0.1
1,042,335	-		CCNA_00968	0.11	-0.1
1,042,342	+		CCNA_00968	0.12	+0.0
1,042,347	+		CCNA_00968	0.12	+0.2
1,042,373	-		CCNA_00968	0.14	-1.5
1,042,389	+		CCNA_00968	0.15	+1.0
1,042,394	-		CCNA_00968	0.15	-0.5
1,042,410	+		CCNA_00968	0.16	+0.2
1,042,448	+		CCNA_00968	0.19	+0.1
1,042,454	+		CCNA_00968	0.19	+0.5
1,042,463	-		CCNA_00968	0.20	-0.6
1,042,502	-		CCNA_00968	0.23	-0.9
1,042,507	-		CCNA_00968	0.23	-1.5
1,042,507	-		CCNA_00968	0.23	-0.4
1,042,528	-		CCNA_00968	0.24	-0.0
1,042,528	-		CCNA_00968	0.24	-0.5
1,042,528	-		CCNA_00968	0.24	-0.2
1,042,574	+		CCNA_00968	0.27	+0.6
1,042,574	+		CCNA_00968	0.27	-0.2
1,042,613	+		CCNA_00968	0.30	-0.6
1,042,622	-		CCNA_00968	0.31	+0.7
1,042,625	+		CCNA_00968	0.31	+2.0
1,042,625	+		CCNA_00968	0.31	+0.2
1,042,628	-		CCNA_00968	0.31	-0.2
1,042,628	-		CCNA_00968	0.31	-0.0
1,042,633	-		CCNA_00968	0.31	+1.0
1,042,719	-		CCNA_00968	0.37	+0.2
1,042,769	-		CCNA_00968	0.40	-3.4
1,042,836	-		CCNA_00968	0.45	-1.9
1,042,846	+		CCNA_00968	0.45	+0.3
1,042,854	-		CCNA_00968	0.46	-0.6
1,042,872	-		CCNA_00968	0.47	+0.1
1,042,898	-		CCNA_00968	0.49	+0.5
1,042,911	+		CCNA_00968	0.50	+1.0
1,042,911	+		CCNA_00968	0.50	+0.1
1,042,920	-		CCNA_00968	0.50	+1.7
1,042,980	-		CCNA_00968	0.54	-1.2
1,042,997	+		CCNA_00968	0.56	+0.5
1,043,008	-		CCNA_00968	0.56	-0.1
1,043,015	-		CCNA_00968	0.57	-0.1
1,043,031	-		CCNA_00968	0.58	-1.0
1,043,060	+		CCNA_00968	0.60	-0.5
1,043,060	+		CCNA_00968	0.60	-0.4
1,043,060	+		CCNA_00968	0.60	+0.4
1,043,068	-		CCNA_00968	0.60	-0.6
1,043,074	-		CCNA_00968	0.61	-0.7
1,043,099	-		CCNA_00968	0.62	-0.5
1,043,113	+		CCNA_00968	0.63	+0.3
1,043,122	+		CCNA_00968	0.64	+0.7
1,043,208	+		CCNA_00968	0.70	+0.7
1,043,208	+		CCNA_00968	0.70	+0.3
1,043,208	+		CCNA_00968	0.70	-0.3
1,043,215	+		CCNA_00968	0.70	-0.7
1,043,232	+		CCNA_00968	0.71	+0.7
1,043,250	-		CCNA_00968	0.72	-0.4
1,043,264	+		CCNA_00968	0.73	+0.0
1,043,272	-		CCNA_00968	0.74	+1.0
1,043,303	+		CCNA_00968	0.76	+0.5
1,043,400	+		CCNA_00968	0.82	-0.2
1,043,400	+		CCNA_00968	0.82	+0.1
1,043,408	-		CCNA_00968	0.83	+0.5
1,043,444	-		CCNA_00968	0.85	-1.0
1,043,447	+		CCNA_00968	0.86	+0.3
1,043,449	-		CCNA_00968	0.86	+0.3
1,043,597	+				+0.5
1,043,597	+				-0.3
1,043,605	-				-0.3
1,043,658	+				-1.4
1,043,671	+				+0.2
1,043,680	+				+2.0
1,043,698	-				-0.5
1,043,751	-				-3.1
1,043,777	+				+1.2
1,043,889	+				+0.7
1,043,896	+				-0.3
1,043,897	-				-0.2
1,043,897	-				+0.8
1,043,993	+				-0.3
1,044,011	+				+0.4
1,044,011	+				+0.1
1,044,014	-				+0.2
1,044,036	+				-0.5
1,044,039	-				+1.0
1,044,064	-				+0.2
1,044,064	-				+0.2
1,044,222	+				+0.0
1,044,359	+		CCNA_00969	0.13	-0.1
1,044,378	+		CCNA_00969	0.15	-1.5
1,044,388	-		CCNA_00969	0.15	+0.1
1,044,420	-		CCNA_00969	0.17	-1.4
1,044,473	-		CCNA_00969	0.20	-0.0
1,044,494	+		CCNA_00969	0.21	+1.0
1,044,502	-		CCNA_00969	0.22	-0.2
1,044,502	-		CCNA_00969	0.22	-0.9
1,044,511	+		CCNA_00969	0.22	-0.7
1,044,517	-		CCNA_00969	0.22	-0.1
1,044,522	-		CCNA_00969	0.23	+0.5
1,044,528	-		CCNA_00969	0.23	+1.5
1,044,549	+		CCNA_00969	0.24	+1.2
1,044,573	+		CCNA_00969	0.26	-0.3
1,044,578	+		CCNA_00969	0.26	+0.2
1,044,647	+		CCNA_00969	0.30	+1.0