Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20105 and CA264_20110 are separated by 66 nucleotides CA264_20110 and CA264_20115 are separated by 179 nucleotides
CA264_20105: CA264_20105 - D-arabinose 5-phosphate isomerase, at 4,635,006 to 4,635,977
_20105
CA264_20110: CA264_20110 - DNA helicase RecQ, at 4,636,044 to 4,638,224
_20110
CA264_20115: CA264_20115 - phosphoribosylamine--glycine ligase, at 4,638,404 to 4,639,693
_20115
Position (kb)
4636
4637
4638
4639 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4636.041 kb on + strand at 4636.042 kb on - strand at 4636.042 kb on - strand at 4636.409 kb on + strand, within CA264_20110 at 4636.720 kb on - strand, within CA264_20110 at 4637.049 kb on + strand, within CA264_20110 at 4637.050 kb on - strand, within CA264_20110 at 4637.056 kb on - strand, within CA264_20110 at 4637.190 kb on + strand, within CA264_20110 at 4637.324 kb on - strand, within CA264_20110 at 4637.333 kb on + strand, within CA264_20110 at 4637.334 kb on - strand, within CA264_20110 at 4637.532 kb on - strand, within CA264_20110 at 4637.571 kb on - strand, within CA264_20110 at 4637.817 kb on - strand, within CA264_20110 at 4637.844 kb on + strand, within CA264_20110 at 4638.054 kb on + strand at 4638.055 kb on - strand at 4638.239 kb on - strand at 4638.296 kb on + strand at 4638.309 kb on - strand at 4638.309 kb on - strand at 4638.337 kb on + strand at 4638.337 kb on + strand at 4638.374 kb on + strand at 4638.379 kb on - strand at 4638.403 kb on + strand at 4638.412 kb on - strand at 4638.412 kb on - strand at 4638.420 kb on + strand at 4638.530 kb on - strand at 4638.530 kb on - strand at 4638.540 kb on + strand, within CA264_20115 at 4638.544 kb on + strand, within CA264_20115 at 4638.545 kb on - strand, within CA264_20115 at 4638.592 kb on + strand, within CA264_20115 at 4638.593 kb on - strand, within CA264_20115 at 4638.593 kb on - strand, within CA264_20115 at 4638.673 kb on + strand, within CA264_20115 at 4638.673 kb on + strand, within CA264_20115 at 4638.673 kb on + strand, within CA264_20115 at 4638.785 kb on - strand, within CA264_20115 at 4638.833 kb on + strand, within CA264_20115 at 4638.897 kb on - strand, within CA264_20115 at 4638.980 kb on + strand, within CA264_20115 at 4638.980 kb on + strand, within CA264_20115 at 4639.011 kb on + strand, within CA264_20115 at 4639.012 kb on - strand, within CA264_20115 at 4639.032 kb on - strand, within CA264_20115 at 4639.059 kb on - strand, within CA264_20115 at 4639.059 kb on - strand, within CA264_20115 at 4639.060 kb on + strand, within CA264_20115 at 4639.061 kb on - strand, within CA264_20115 at 4639.081 kb on + strand, within CA264_20115 at 4639.081 kb on + strand, within CA264_20115
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 4,636,041 + -0.5 4,636,042 - -0.4 4,636,042 - -1.5 4,636,409 + CA264_20110 0.17 -0.2 4,636,720 - CA264_20110 0.31 -2.1 4,637,049 + CA264_20110 0.46 -1.1 4,637,050 - CA264_20110 0.46 +0.1 4,637,056 - CA264_20110 0.46 -2.8 4,637,190 + CA264_20110 0.53 -2.0 4,637,324 - CA264_20110 0.59 +2.4 4,637,333 + CA264_20110 0.59 -1.4 4,637,334 - CA264_20110 0.59 +0.1 4,637,532 - CA264_20110 0.68 -0.2 4,637,571 - CA264_20110 0.70 -2.5 4,637,817 - CA264_20110 0.81 -0.9 4,637,844 + CA264_20110 0.83 -1.7 4,638,054 + -2.0 4,638,055 - -1.4 4,638,239 - -0.4 4,638,296 + +1.0 4,638,309 - +0.1 4,638,309 - +0.4 4,638,337 + -0.0 4,638,337 + +0.2 4,638,374 + +0.1 4,638,379 - +0.5 4,638,403 + -0.6 4,638,412 - -1.1 4,638,412 - -0.8 4,638,420 + +0.6 4,638,530 - -1.2 4,638,530 - +0.7 4,638,540 + CA264_20115 0.11 +0.3 4,638,544 + CA264_20115 0.11 +0.1 4,638,545 - CA264_20115 0.11 +0.2 4,638,592 + CA264_20115 0.15 -1.5 4,638,593 - CA264_20115 0.15 -0.1 4,638,593 - CA264_20115 0.15 +0.2 4,638,673 + CA264_20115 0.21 +0.1 4,638,673 + CA264_20115 0.21 +1.5 4,638,673 + CA264_20115 0.21 -0.2 4,638,785 - CA264_20115 0.30 +0.0 4,638,833 + CA264_20115 0.33 -0.2 4,638,897 - CA264_20115 0.38 +0.4 4,638,980 + CA264_20115 0.45 -1.1 4,638,980 + CA264_20115 0.45 +0.0 4,639,011 + CA264_20115 0.47 +0.1 4,639,012 - CA264_20115 0.47 +0.1 4,639,032 - CA264_20115 0.49 +0.6 4,639,059 - CA264_20115 0.51 -0.6 4,639,059 - CA264_20115 0.51 -0.0 4,639,060 + CA264_20115 0.51 -0.5 4,639,061 - CA264_20115 0.51 +0.2 4,639,081 + CA264_20115 0.52 -0.6 4,639,081 + CA264_20115 0.52 +0.5
Or see this region's nucleotide sequence