Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12805 and CA264_12810 are separated by 31 nucleotides CA264_12810 and CA264_12815 are separated by 473 nucleotides
CA264_12805: CA264_12805 - hypothetical protein, at 2,984,405 to 2,985,790
_12805
CA264_12810: CA264_12810 - hypothetical protein, at 2,985,822 to 2,986,955
_12810
CA264_12815: CA264_12815 - polysaccharide deacetylase, at 2,987,429 to 2,988,436
_12815
Position (kb)
2985
2986
2987 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2984.853 kb on - strand, within CA264_12805 at 2984.853 kb on - strand, within CA264_12805 at 2984.924 kb on + strand, within CA264_12805 at 2984.924 kb on + strand, within CA264_12805 at 2984.925 kb on - strand, within CA264_12805 at 2985.041 kb on - strand, within CA264_12805 at 2985.041 kb on - strand, within CA264_12805 at 2985.059 kb on + strand, within CA264_12805 at 2985.070 kb on + strand, within CA264_12805 at 2985.130 kb on + strand, within CA264_12805 at 2985.131 kb on - strand, within CA264_12805 at 2985.166 kb on - strand, within CA264_12805 at 2985.169 kb on + strand, within CA264_12805 at 2985.170 kb on - strand, within CA264_12805 at 2985.170 kb on - strand, within CA264_12805 at 2985.262 kb on + strand, within CA264_12805 at 2985.276 kb on + strand, within CA264_12805 at 2985.276 kb on + strand, within CA264_12805 at 2985.376 kb on - strand, within CA264_12805 at 2985.439 kb on + strand, within CA264_12805 at 2985.439 kb on + strand, within CA264_12805 at 2985.440 kb on - strand, within CA264_12805 at 2985.470 kb on - strand, within CA264_12805 at 2985.478 kb on - strand, within CA264_12805 at 2985.478 kb on - strand, within CA264_12805 at 2985.568 kb on - strand, within CA264_12805 at 2985.615 kb on - strand, within CA264_12805 at 2985.615 kb on - strand, within CA264_12805 at 2985.615 kb on - strand, within CA264_12805 at 2985.618 kb on + strand, within CA264_12805 at 2985.618 kb on + strand, within CA264_12805 at 2985.618 kb on + strand, within CA264_12805 at 2985.619 kb on - strand, within CA264_12805 at 2985.619 kb on - strand, within CA264_12805 at 2985.619 kb on - strand, within CA264_12805 at 2985.619 kb on - strand, within CA264_12805 at 2985.619 kb on - strand, within CA264_12805 at 2985.625 kb on - strand, within CA264_12805 at 2985.625 kb on - strand, within CA264_12805 at 2985.625 kb on - strand, within CA264_12805 at 2985.625 kb on - strand, within CA264_12805 at 2985.771 kb on - strand at 2985.779 kb on + strand at 2985.779 kb on + strand at 2985.779 kb on + strand at 2985.781 kb on + strand at 2985.781 kb on + strand at 2985.799 kb on + strand at 2985.799 kb on + strand at 2985.799 kb on + strand at 2985.800 kb on - strand at 2985.800 kb on - strand at 2985.800 kb on - strand at 2985.800 kb on - strand at 2985.804 kb on - strand at 2985.804 kb on - strand at 2985.805 kb on + strand at 2985.805 kb on + strand at 2985.805 kb on + strand at 2985.805 kb on + strand at 2985.805 kb on + strand at 2985.805 kb on + strand at 2985.806 kb on - strand at 2985.806 kb on - strand at 2985.806 kb on - strand at 2985.809 kb on + strand at 2985.809 kb on + strand at 2985.809 kb on + strand at 2985.811 kb on + strand at 2985.815 kb on + strand at 2985.815 kb on + strand at 2985.816 kb on - strand at 2985.816 kb on - strand at 2985.818 kb on - strand at 2985.818 kb on - strand at 2985.824 kb on - strand at 2985.907 kb on + strand at 2985.907 kb on + strand at 2985.924 kb on + strand at 2985.970 kb on - strand, within CA264_12810 at 2986.121 kb on + strand, within CA264_12810 at 2986.178 kb on + strand, within CA264_12810 at 2986.179 kb on - strand, within CA264_12810 at 2986.471 kb on + strand, within CA264_12810 at 2986.472 kb on - strand, within CA264_12810 at 2986.498 kb on + strand, within CA264_12810 at 2986.503 kb on + strand, within CA264_12810 at 2986.505 kb on + strand, within CA264_12810 at 2986.505 kb on + strand, within CA264_12810 at 2986.517 kb on + strand, within CA264_12810 at 2986.530 kb on + strand, within CA264_12810 at 2986.555 kb on + strand, within CA264_12810 at 2986.555 kb on + strand, within CA264_12810 at 2986.556 kb on - strand, within CA264_12810 at 2986.592 kb on + strand, within CA264_12810 at 2986.661 kb on - strand, within CA264_12810 at 2986.700 kb on + strand, within CA264_12810 at 2986.700 kb on + strand, within CA264_12810 at 2986.806 kb on - strand, within CA264_12810 at 2986.869 kb on + strand at 2986.910 kb on + strand at 2986.910 kb on + strand at 2986.973 kb on + strand at 2986.973 kb on + strand at 2986.974 kb on - strand at 2986.974 kb on - strand at 2986.974 kb on - strand at 2986.976 kb on + strand at 2987.014 kb on + strand at 2987.015 kb on - strand at 2987.022 kb on - strand at 2987.022 kb on - strand at 2987.022 kb on - strand at 2987.024 kb on + strand at 2987.024 kb on + strand at 2987.043 kb on + strand at 2987.043 kb on + strand at 2987.044 kb on - strand at 2987.048 kb on - strand at 2987.051 kb on + strand at 2987.103 kb on + strand at 2987.104 kb on - strand at 2987.109 kb on + strand at 2987.186 kb on - strand at 2987.282 kb on - strand at 2987.309 kb on - strand at 2987.350 kb on - strand at 2987.351 kb on + strand at 2987.351 kb on + strand at 2987.352 kb on - strand at 2987.352 kb on - strand at 2987.377 kb on - strand at 2987.411 kb on + strand at 2987.412 kb on - strand at 2987.415 kb on + strand at 2987.440 kb on + strand at 2987.442 kb on + strand at 2987.464 kb on - strand at 2987.527 kb on + strand at 2987.533 kb on + strand, within CA264_12815 at 2987.619 kb on + strand, within CA264_12815 at 2987.620 kb on - strand, within CA264_12815 at 2987.745 kb on - strand, within CA264_12815 at 2987.767 kb on + strand, within CA264_12815 at 2987.810 kb on + strand, within CA264_12815 at 2987.810 kb on + strand, within CA264_12815 at 2987.810 kb on + strand, within CA264_12815 at 2987.811 kb on - strand, within CA264_12815
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 2,984,853 - CA264_12805 0.32 -0.4 2,984,853 - CA264_12805 0.32 +0.0 2,984,924 + CA264_12805 0.37 -1.6 2,984,924 + CA264_12805 0.37 -0.0 2,984,925 - CA264_12805 0.38 -0.2 2,985,041 - CA264_12805 0.46 -0.5 2,985,041 - CA264_12805 0.46 +0.5 2,985,059 + CA264_12805 0.47 +0.3 2,985,070 + CA264_12805 0.48 +0.4 2,985,130 + CA264_12805 0.52 -0.3 2,985,131 - CA264_12805 0.52 -0.1 2,985,166 - CA264_12805 0.55 -1.9 2,985,169 + CA264_12805 0.55 +1.0 2,985,170 - CA264_12805 0.55 +1.3 2,985,170 - CA264_12805 0.55 +0.0 2,985,262 + CA264_12805 0.62 +0.5 2,985,276 + CA264_12805 0.63 -0.7 2,985,276 + CA264_12805 0.63 -0.0 2,985,376 - CA264_12805 0.70 -0.2 2,985,439 + CA264_12805 0.75 -0.0 2,985,439 + CA264_12805 0.75 -0.2 2,985,440 - CA264_12805 0.75 -0.4 2,985,470 - CA264_12805 0.77 -0.8 2,985,478 - CA264_12805 0.77 +1.1 2,985,478 - CA264_12805 0.77 -1.0 2,985,568 - CA264_12805 0.84 -1.3 2,985,615 - CA264_12805 0.87 +0.8 2,985,615 - CA264_12805 0.87 -0.5 2,985,615 - CA264_12805 0.87 +0.6 2,985,618 + CA264_12805 0.88 -0.3 2,985,618 + CA264_12805 0.88 -0.4 2,985,618 + CA264_12805 0.88 -0.0 2,985,619 - CA264_12805 0.88 +0.1 2,985,619 - CA264_12805 0.88 +1.1 2,985,619 - CA264_12805 0.88 -0.4 2,985,619 - CA264_12805 0.88 +0.1 2,985,619 - CA264_12805 0.88 -0.5 2,985,625 - CA264_12805 0.88 +0.4 2,985,625 - CA264_12805 0.88 -2.0 2,985,625 - CA264_12805 0.88 +0.4 2,985,625 - CA264_12805 0.88 -0.5 2,985,771 - +0.7 2,985,779 + +0.3 2,985,779 + +1.1 2,985,779 + -1.0 2,985,781 + -0.4 2,985,781 + -0.3 2,985,799 + -0.5 2,985,799 + -0.1 2,985,799 + -0.3 2,985,800 - +1.4 2,985,800 - +0.3 2,985,800 - -0.4 2,985,800 - -0.3 2,985,804 - -0.1 2,985,804 - +0.3 2,985,805 + -0.3 2,985,805 + -1.3 2,985,805 + -0.8 2,985,805 + +0.7 2,985,805 + +0.4 2,985,805 + +0.2 2,985,806 - -0.7 2,985,806 - +0.3 2,985,806 - +0.8 2,985,809 + -0.9 2,985,809 + +0.9 2,985,809 + +0.4 2,985,811 + +1.3 2,985,815 + -0.3 2,985,815 + -1.3 2,985,816 - -0.3 2,985,816 - -0.1 2,985,818 - -0.0 2,985,818 - +1.1 2,985,824 - -0.3 2,985,907 + -0.0 2,985,907 + +0.6 2,985,924 + +0.3 2,985,970 - CA264_12810 0.13 -0.3 2,986,121 + CA264_12810 0.26 +1.1 2,986,178 + CA264_12810 0.31 +0.4 2,986,179 - CA264_12810 0.31 +2.3 2,986,471 + CA264_12810 0.57 -0.2 2,986,472 - CA264_12810 0.57 +0.1 2,986,498 + CA264_12810 0.60 -1.3 2,986,503 + CA264_12810 0.60 +0.5 2,986,505 + CA264_12810 0.60 +0.5 2,986,505 + CA264_12810 0.60 +0.2 2,986,517 + CA264_12810 0.61 -0.1 2,986,530 + CA264_12810 0.62 -0.3 2,986,555 + CA264_12810 0.65 +1.3 2,986,555 + CA264_12810 0.65 +0.6 2,986,556 - CA264_12810 0.65 +1.1 2,986,592 + CA264_12810 0.68 +0.9 2,986,661 - CA264_12810 0.74 +0.3 2,986,700 + CA264_12810 0.77 +0.3 2,986,700 + CA264_12810 0.77 -0.4 2,986,806 - CA264_12810 0.87 +0.0 2,986,869 + -0.3 2,986,910 + +0.2 2,986,910 + +0.8 2,986,973 + -0.2 2,986,973 + -1.4 2,986,974 - -0.1 2,986,974 - -0.8 2,986,974 - +0.1 2,986,976 + +1.1 2,987,014 + +1.5 2,987,015 - -0.1 2,987,022 - -0.0 2,987,022 - -0.3 2,987,022 - -0.2 2,987,024 + +0.5 2,987,024 + -0.1 2,987,043 + -0.8 2,987,043 + -0.5 2,987,044 - -0.5 2,987,048 - -1.1 2,987,051 + -1.8 2,987,103 + -0.7 2,987,104 - +0.9 2,987,109 + -0.2 2,987,186 - -0.1 2,987,282 - -0.0 2,987,309 - +1.3 2,987,350 - +0.8 2,987,351 + +1.6 2,987,351 + +0.0 2,987,352 - +1.1 2,987,352 - +0.1 2,987,377 - -0.5 2,987,411 + -0.2 2,987,412 - +0.5 2,987,415 + +0.5 2,987,440 + +0.5 2,987,442 + -0.0 2,987,464 - +0.9 2,987,527 + +0.1 2,987,533 + CA264_12815 0.10 +0.2 2,987,619 + CA264_12815 0.19 -0.3 2,987,620 - CA264_12815 0.19 -0.3 2,987,745 - CA264_12815 0.31 -0.2 2,987,767 + CA264_12815 0.34 +0.1 2,987,810 + CA264_12815 0.38 -0.7 2,987,810 + CA264_12815 0.38 -0.2 2,987,810 + CA264_12815 0.38 -0.4 2,987,811 - CA264_12815 0.38 +1.8
Or see this region's nucleotide sequence