Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11840 and CA264_11845 are separated by 52 nucleotides CA264_11845 and CA264_11850 are separated by 157 nucleotides
CA264_11840: CA264_11840 - membrane-binding protein, at 2,754,016 to 2,755,341
_11840
CA264_11845: CA264_11845 - hypothetical protein, at 2,755,394 to 2,755,873
_11845
CA264_11850: CA264_11850 - short-chain dehydrogenase, at 2,756,031 to 2,757,068
_11850
Position (kb)
2755
2756 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2754.470 kb on - strand, within CA264_11840 at 2754.470 kb on - strand, within CA264_11840 at 2754.473 kb on - strand, within CA264_11840 at 2754.577 kb on + strand, within CA264_11840 at 2754.676 kb on + strand, within CA264_11840 at 2754.686 kb on - strand, within CA264_11840 at 2754.689 kb on - strand, within CA264_11840 at 2754.793 kb on + strand, within CA264_11840 at 2754.794 kb on - strand, within CA264_11840 at 2754.796 kb on - strand, within CA264_11840 at 2754.810 kb on - strand, within CA264_11840 at 2754.888 kb on + strand, within CA264_11840 at 2754.905 kb on - strand, within CA264_11840 at 2754.973 kb on + strand, within CA264_11840 at 2754.974 kb on - strand, within CA264_11840 at 2755.031 kb on + strand, within CA264_11840 at 2755.031 kb on + strand, within CA264_11840 at 2755.031 kb on + strand, within CA264_11840 at 2755.032 kb on - strand, within CA264_11840 at 2755.052 kb on - strand, within CA264_11840 at 2755.055 kb on - strand, within CA264_11840 at 2755.098 kb on + strand, within CA264_11840 at 2755.099 kb on - strand, within CA264_11840 at 2755.099 kb on - strand, within CA264_11840 at 2755.099 kb on - strand, within CA264_11840 at 2755.119 kb on + strand, within CA264_11840 at 2755.119 kb on + strand, within CA264_11840 at 2755.119 kb on + strand, within CA264_11840 at 2755.123 kb on + strand, within CA264_11840 at 2755.124 kb on - strand, within CA264_11840 at 2755.124 kb on - strand, within CA264_11840 at 2755.270 kb on - strand at 2755.339 kb on + strand at 2755.391 kb on + strand at 2755.431 kb on - strand at 2755.471 kb on + strand, within CA264_11845 at 2755.582 kb on + strand, within CA264_11845 at 2755.583 kb on - strand, within CA264_11845 at 2755.621 kb on + strand, within CA264_11845 at 2755.621 kb on + strand, within CA264_11845 at 2755.623 kb on + strand, within CA264_11845 at 2755.685 kb on + strand, within CA264_11845 at 2755.686 kb on - strand, within CA264_11845 at 2755.738 kb on - strand, within CA264_11845 at 2755.841 kb on + strand at 2755.842 kb on - strand at 2755.873 kb on + strand at 2755.911 kb on + strand at 2755.912 kb on - strand at 2755.991 kb on - strand at 2756.014 kb on - strand at 2756.014 kb on - strand at 2756.049 kb on + strand at 2756.050 kb on - strand at 2756.050 kb on - strand at 2756.102 kb on - strand at 2756.102 kb on - strand at 2756.223 kb on + strand, within CA264_11850 at 2756.223 kb on + strand, within CA264_11850 at 2756.224 kb on - strand, within CA264_11850 at 2756.228 kb on - strand, within CA264_11850 at 2756.233 kb on + strand, within CA264_11850 at 2756.233 kb on + strand, within CA264_11850 at 2756.368 kb on - strand, within CA264_11850 at 2756.377 kb on + strand, within CA264_11850 at 2756.392 kb on - strand, within CA264_11850 at 2756.392 kb on - strand, within CA264_11850 at 2756.392 kb on - strand, within CA264_11850 at 2756.461 kb on + strand, within CA264_11850 at 2756.511 kb on + strand, within CA264_11850 at 2756.544 kb on + strand, within CA264_11850 at 2756.544 kb on + strand, within CA264_11850 at 2756.545 kb on - strand, within CA264_11850 at 2756.602 kb on + strand, within CA264_11850 at 2756.608 kb on + strand, within CA264_11850 at 2756.679 kb on - strand, within CA264_11850 at 2756.718 kb on + strand, within CA264_11850 at 2756.779 kb on + strand, within CA264_11850 at 2756.780 kb on - strand, within CA264_11850 at 2756.780 kb on - strand, within CA264_11850 at 2756.811 kb on + strand, within CA264_11850
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 2,754,470 - CA264_11840 0.34 +0.3 2,754,470 - CA264_11840 0.34 -0.1 2,754,473 - CA264_11840 0.34 -0.0 2,754,577 + CA264_11840 0.42 -1.8 2,754,676 + CA264_11840 0.50 -0.1 2,754,686 - CA264_11840 0.51 +0.7 2,754,689 - CA264_11840 0.51 +1.4 2,754,793 + CA264_11840 0.59 -0.9 2,754,794 - CA264_11840 0.59 +0.7 2,754,796 - CA264_11840 0.59 +0.1 2,754,810 - CA264_11840 0.60 +0.4 2,754,888 + CA264_11840 0.66 -0.3 2,754,905 - CA264_11840 0.67 +2.3 2,754,973 + CA264_11840 0.72 -0.7 2,754,974 - CA264_11840 0.72 -0.4 2,755,031 + CA264_11840 0.77 -0.7 2,755,031 + CA264_11840 0.77 +0.1 2,755,031 + CA264_11840 0.77 +0.2 2,755,032 - CA264_11840 0.77 +0.3 2,755,052 - CA264_11840 0.78 -0.2 2,755,055 - CA264_11840 0.78 -0.5 2,755,098 + CA264_11840 0.82 -0.3 2,755,099 - CA264_11840 0.82 +0.3 2,755,099 - CA264_11840 0.82 -0.2 2,755,099 - CA264_11840 0.82 -0.3 2,755,119 + CA264_11840 0.83 +1.6 2,755,119 + CA264_11840 0.83 +0.0 2,755,119 + CA264_11840 0.83 +0.1 2,755,123 + CA264_11840 0.83 +0.4 2,755,124 - CA264_11840 0.84 +0.2 2,755,124 - CA264_11840 0.84 -0.9 2,755,270 - -1.1 2,755,339 + -0.4 2,755,391 + +1.0 2,755,431 - +0.3 2,755,471 + CA264_11845 0.16 -0.2 2,755,582 + CA264_11845 0.39 +2.2 2,755,583 - CA264_11845 0.39 +0.3 2,755,621 + CA264_11845 0.47 -1.1 2,755,621 + CA264_11845 0.47 +0.1 2,755,623 + CA264_11845 0.48 -0.3 2,755,685 + CA264_11845 0.61 -0.0 2,755,686 - CA264_11845 0.61 +0.2 2,755,738 - CA264_11845 0.72 -0.5 2,755,841 + -1.0 2,755,842 - -0.4 2,755,873 + -0.2 2,755,911 + -0.4 2,755,912 - +0.2 2,755,991 - +1.3 2,756,014 - +0.6 2,756,014 - -1.1 2,756,049 + +0.1 2,756,050 - -0.0 2,756,050 - -0.0 2,756,102 - -0.2 2,756,102 - +1.3 2,756,223 + CA264_11850 0.18 -1.1 2,756,223 + CA264_11850 0.18 -0.9 2,756,224 - CA264_11850 0.19 +0.9 2,756,228 - CA264_11850 0.19 -0.0 2,756,233 + CA264_11850 0.19 -0.7 2,756,233 + CA264_11850 0.19 +0.5 2,756,368 - CA264_11850 0.32 +0.9 2,756,377 + CA264_11850 0.33 -0.2 2,756,392 - CA264_11850 0.35 -0.2 2,756,392 - CA264_11850 0.35 -0.1 2,756,392 - CA264_11850 0.35 +0.1 2,756,461 + CA264_11850 0.41 +0.1 2,756,511 + CA264_11850 0.46 -1.7 2,756,544 + CA264_11850 0.49 -0.1 2,756,544 + CA264_11850 0.49 +0.2 2,756,545 - CA264_11850 0.50 +0.9 2,756,602 + CA264_11850 0.55 -0.4 2,756,608 + CA264_11850 0.56 -0.8 2,756,679 - CA264_11850 0.62 -0.5 2,756,718 + CA264_11850 0.66 +0.0 2,756,779 + CA264_11850 0.72 -1.7 2,756,780 - CA264_11850 0.72 -2.8 2,756,780 - CA264_11850 0.72 -0.5 2,756,811 + CA264_11850 0.75 +0.3
Or see this region's nucleotide sequence