Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10805

Experiment: m.b. Paraquat dichloride 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10800 and CA264_10805 are separated by 160 nucleotidesCA264_10805 and CA264_10810 are separated by 97 nucleotides CA264_10800: CA264_10800 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit, at 2,496,503 to 2,497,258 _10800 CA264_10805: CA264_10805 - NADPH-dependent oxidoreductase, at 2,497,419 to 2,497,943 _10805 CA264_10810: CA264_10810 - cell division protein FtsZ, at 2,498,041 to 2,499,612 _10810 Position (kb) 2497 2498Strain fitness (log2 ratio) -2 -1 0 1at 2497.328 kb on + strandat 2497.336 kb on - strandat 2497.337 kb on + strandat 2497.337 kb on + strandat 2497.338 kb on - strandat 2497.338 kb on - strandat 2497.360 kb on + strandat 2497.360 kb on + strandat 2497.388 kb on - strandat 2497.388 kb on - strandat 2497.390 kb on - strandat 2497.410 kb on + strandat 2497.415 kb on - strandat 2497.415 kb on - strandat 2497.416 kb on + strandat 2497.418 kb on + strandat 2497.418 kb on + strandat 2497.419 kb on - strandat 2497.432 kb on + strandat 2497.475 kb on - strand, within CA264_10805at 2497.658 kb on + strand, within CA264_10805at 2497.659 kb on - strand, within CA264_10805at 2497.659 kb on - strand, within CA264_10805at 2497.810 kb on - strand, within CA264_10805at 2497.883 kb on - strand, within CA264_10805at 2497.883 kb on - strand, within CA264_10805at 2497.961 kb on - strandat 2497.961 kb on - strandat 2497.979 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml
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2,497,328 + -0.4
2,497,336 - +0.3
2,497,337 + +0.2
2,497,337 + -0.5
2,497,338 - -0.0
2,497,338 - -0.3
2,497,360 + +0.1
2,497,360 + -0.7
2,497,388 - -0.1
2,497,388 - -0.3
2,497,390 - +0.8
2,497,410 + -1.3
2,497,415 - +0.4
2,497,415 - +0.2
2,497,416 + -0.3
2,497,418 + -1.5
2,497,418 + -0.3
2,497,419 - -1.1
2,497,432 + -1.8
2,497,475 - CA264_10805 0.11 +0.5
2,497,658 + CA264_10805 0.46 -2.3
2,497,659 - CA264_10805 0.46 -1.0
2,497,659 - CA264_10805 0.46 -2.0
2,497,810 - CA264_10805 0.74 -1.8
2,497,883 - CA264_10805 0.88 -1.6
2,497,883 - CA264_10805 0.88 -2.2
2,497,961 - -0.3
2,497,961 - -2.4
2,497,979 - -0.2

Or see this region's nucleotide sequence