Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08415 and CA264_08420 are separated by 76 nucleotides
CA264_08415: CA264_08415 - hypothetical protein, at 1,949,616 to 1,950,479
_08415
CA264_08420: CA264_08420 - AraC family transcriptional regulator, at 1,950,556 to 1,951,374
_08420
Position (kb)
1949
1950
1951 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1948.616 kb on - strand at 1948.623 kb on + strand at 1948.624 kb on - strand at 1948.681 kb on + strand at 1948.681 kb on + strand at 1948.681 kb on + strand at 1948.682 kb on - strand at 1948.682 kb on - strand at 1948.682 kb on - strand at 1948.682 kb on - strand at 1948.690 kb on - strand at 1948.724 kb on + strand at 1948.724 kb on + strand at 1948.724 kb on + strand at 1948.748 kb on + strand at 1948.756 kb on + strand at 1948.756 kb on + strand at 1948.821 kb on - strand at 1948.821 kb on - strand at 1948.879 kb on + strand at 1948.886 kb on - strand at 1948.888 kb on - strand at 1948.950 kb on + strand at 1949.012 kb on + strand at 1949.019 kb on - strand at 1949.020 kb on + strand at 1949.032 kb on + strand at 1949.032 kb on + strand at 1949.080 kb on - strand at 1949.087 kb on + strand at 1949.088 kb on - strand at 1949.111 kb on - strand at 1949.122 kb on + strand at 1949.123 kb on - strand at 1949.126 kb on + strand at 1949.126 kb on + strand at 1949.154 kb on + strand at 1949.154 kb on + strand at 1949.155 kb on - strand at 1949.166 kb on - strand at 1949.204 kb on + strand at 1949.213 kb on - strand at 1949.218 kb on + strand at 1949.220 kb on + strand at 1949.269 kb on + strand at 1949.283 kb on + strand at 1949.284 kb on - strand at 1949.284 kb on - strand at 1949.285 kb on + strand at 1949.352 kb on - strand at 1949.352 kb on - strand at 1949.353 kb on + strand at 1949.354 kb on - strand at 1949.362 kb on - strand at 1949.362 kb on - strand at 1949.364 kb on - strand at 1949.412 kb on - strand at 1949.412 kb on - strand at 1949.412 kb on - strand at 1949.417 kb on + strand at 1949.419 kb on + strand at 1949.419 kb on + strand at 1949.420 kb on - strand at 1949.420 kb on - strand at 1949.483 kb on + strand at 1949.485 kb on + strand at 1949.493 kb on - strand at 1949.493 kb on - strand at 1949.497 kb on + strand at 1949.617 kb on + strand at 1949.617 kb on + strand at 1949.629 kb on - strand at 1949.874 kb on + strand, within CA264_08415 at 1949.894 kb on - strand, within CA264_08415 at 1949.907 kb on + strand, within CA264_08415 at 1949.931 kb on + strand, within CA264_08415 at 1949.983 kb on + strand, within CA264_08415 at 1949.985 kb on + strand, within CA264_08415 at 1950.047 kb on + strand, within CA264_08415 at 1950.223 kb on - strand, within CA264_08415 at 1950.460 kb on + strand at 1950.460 kb on + strand at 1950.482 kb on + strand at 1950.482 kb on + strand at 1950.482 kb on + strand at 1950.483 kb on - strand at 1950.483 kb on - strand at 1950.483 kb on - strand at 1950.486 kb on + strand at 1950.595 kb on + strand at 1950.606 kb on - strand at 1950.609 kb on + strand at 1950.609 kb on + strand at 1950.610 kb on - strand at 1950.620 kb on + strand at 1950.647 kb on - strand, within CA264_08420 at 1950.647 kb on - strand, within CA264_08420 at 1950.651 kb on - strand, within CA264_08420 at 1950.677 kb on + strand, within CA264_08420 at 1950.677 kb on + strand, within CA264_08420 at 1950.678 kb on - strand, within CA264_08420 at 1950.680 kb on + strand, within CA264_08420 at 1950.752 kb on - strand, within CA264_08420 at 1950.906 kb on + strand, within CA264_08420 at 1950.907 kb on - strand, within CA264_08420 at 1950.907 kb on - strand, within CA264_08420 at 1950.932 kb on + strand, within CA264_08420 at 1950.932 kb on + strand, within CA264_08420 at 1951.115 kb on - strand, within CA264_08420 at 1951.136 kb on - strand, within CA264_08420 at 1951.220 kb on + strand, within CA264_08420 at 1951.230 kb on + strand, within CA264_08420 at 1951.231 kb on - strand, within CA264_08420 at 1951.237 kb on - strand, within CA264_08420 at 1951.331 kb on + strand at 1951.339 kb on + strand at 1951.340 kb on - strand at 1951.342 kb on + strand at 1951.380 kb on - strand at 1951.405 kb on - strand at 1951.445 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 1,948,616 - +0.1 1,948,623 + -0.6 1,948,624 - -0.1 1,948,681 + +0.2 1,948,681 + +0.3 1,948,681 + +0.3 1,948,682 - +0.3 1,948,682 - -0.1 1,948,682 - +0.5 1,948,682 - -0.1 1,948,690 - +0.5 1,948,724 + -0.2 1,948,724 + -0.6 1,948,724 + +0.4 1,948,748 + -0.7 1,948,756 + -0.3 1,948,756 + +0.2 1,948,821 - +0.1 1,948,821 - +0.9 1,948,879 + +0.4 1,948,886 - -0.4 1,948,888 - +0.4 1,948,950 + -1.1 1,949,012 + +0.1 1,949,019 - +0.6 1,949,020 + -0.2 1,949,032 + +0.0 1,949,032 + -0.6 1,949,080 - -0.1 1,949,087 + +0.4 1,949,088 - +0.1 1,949,111 - -0.6 1,949,122 + +0.6 1,949,123 - -0.6 1,949,126 + +0.3 1,949,126 + +0.2 1,949,154 + +0.8 1,949,154 + -0.0 1,949,155 - -0.1 1,949,166 - -0.6 1,949,204 + -0.5 1,949,213 - -1.6 1,949,218 + +0.2 1,949,220 + -1.2 1,949,269 + +0.6 1,949,283 + +0.0 1,949,284 - -0.4 1,949,284 - -0.4 1,949,285 + +0.2 1,949,352 - +0.1 1,949,352 - +0.1 1,949,353 + +0.2 1,949,354 - -0.3 1,949,362 - -0.7 1,949,362 - +2.6 1,949,364 - +0.2 1,949,412 - -0.0 1,949,412 - -0.2 1,949,412 - +0.5 1,949,417 + +0.4 1,949,419 + +0.1 1,949,419 + -0.2 1,949,420 - +0.4 1,949,420 - +0.2 1,949,483 + +0.6 1,949,485 + -0.1 1,949,493 - +0.0 1,949,493 - -0.0 1,949,497 + -0.3 1,949,617 + -0.2 1,949,617 + +0.1 1,949,629 - -0.0 1,949,874 + CA264_08415 0.30 -0.4 1,949,894 - CA264_08415 0.32 -1.2 1,949,907 + CA264_08415 0.34 +0.0 1,949,931 + CA264_08415 0.36 -0.5 1,949,983 + CA264_08415 0.42 +0.3 1,949,985 + CA264_08415 0.43 -0.2 1,950,047 + CA264_08415 0.50 -1.1 1,950,223 - CA264_08415 0.70 -0.6 1,950,460 + +0.0 1,950,460 + +0.9 1,950,482 + -0.0 1,950,482 + -0.6 1,950,482 + -0.8 1,950,483 - +0.7 1,950,483 - -0.5 1,950,483 - +0.1 1,950,486 + -0.4 1,950,595 + +0.8 1,950,606 - +0.2 1,950,609 + -0.6 1,950,609 + +0.0 1,950,610 - -0.4 1,950,620 + +0.1 1,950,647 - CA264_08420 0.11 -1.9 1,950,647 - CA264_08420 0.11 +0.4 1,950,651 - CA264_08420 0.12 -0.7 1,950,677 + CA264_08420 0.15 +0.2 1,950,677 + CA264_08420 0.15 -1.8 1,950,678 - CA264_08420 0.15 -0.6 1,950,680 + CA264_08420 0.15 -0.1 1,950,752 - CA264_08420 0.24 +0.6 1,950,906 + CA264_08420 0.43 -0.1 1,950,907 - CA264_08420 0.43 -0.0 1,950,907 - CA264_08420 0.43 +0.3 1,950,932 + CA264_08420 0.46 +0.6 1,950,932 + CA264_08420 0.46 -0.1 1,951,115 - CA264_08420 0.68 -0.7 1,951,136 - CA264_08420 0.71 -0.7 1,951,220 + CA264_08420 0.81 +0.3 1,951,230 + CA264_08420 0.82 +0.1 1,951,231 - CA264_08420 0.82 +0.4 1,951,237 - CA264_08420 0.83 +0.5 1,951,331 + +0.2 1,951,339 + -0.1 1,951,340 - +0.0 1,951,342 + +0.2 1,951,380 - -0.5 1,951,405 - +0.0 1,951,445 - +0.6
Or see this region's nucleotide sequence