Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08005 and CA264_08010 are separated by 6 nucleotides CA264_08010 and CA264_08015 are separated by 97 nucleotides CA264_08015 and CA264_08025 are separated by 494 nucleotides
CA264_08005: CA264_08005 - phosphonate ABC transporter ATP-binding protein, at 1,851,242 to 1,851,961
_08005
CA264_08010: CA264_08010 - fructose-6-phosphate aldolase, at 1,851,968 to 1,852,171
_08010
CA264_08015: CA264_08015 - fructose-6-phosphate aldolase, at 1,852,269 to 1,852,925
_08015
CA264_08025: CA264_08025 - GMP synthase (glutamine-hydrolyzing), at 1,853,420 to 1,854,949
_08025
Position (kb)
1852
1853 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1851.271 kb on + strand at 1851.566 kb on + strand, within CA264_08005 at 1851.965 kb on + strand at 1851.965 kb on + strand at 1851.966 kb on - strand at 1851.969 kb on + strand at 1851.969 kb on + strand at 1851.970 kb on - strand at 1851.972 kb on - strand at 1851.978 kb on - strand at 1852.163 kb on + strand at 1852.197 kb on - strand at 1852.210 kb on + strand at 1852.264 kb on + strand at 1852.270 kb on + strand at 1852.270 kb on + strand at 1852.271 kb on - strand at 1852.271 kb on - strand at 1852.271 kb on - strand at 1852.271 kb on - strand at 1852.435 kb on - strand, within CA264_08015 at 1852.453 kb on + strand, within CA264_08015 at 1852.454 kb on - strand, within CA264_08015 at 1852.454 kb on - strand, within CA264_08015 at 1852.454 kb on - strand, within CA264_08015 at 1852.462 kb on + strand, within CA264_08015 at 1852.508 kb on + strand, within CA264_08015 at 1852.509 kb on - strand, within CA264_08015 at 1852.541 kb on - strand, within CA264_08015 at 1852.544 kb on + strand, within CA264_08015 at 1852.544 kb on + strand, within CA264_08015 at 1852.595 kb on + strand, within CA264_08015 at 1852.596 kb on - strand, within CA264_08015 at 1852.739 kb on + strand, within CA264_08015 at 1852.798 kb on - strand, within CA264_08015 at 1852.939 kb on + strand at 1852.942 kb on + strand at 1853.276 kb on - strand at 1853.284 kb on + strand at 1853.285 kb on - strand at 1853.285 kb on - strand at 1853.288 kb on + strand at 1853.289 kb on - strand at 1853.315 kb on - strand at 1853.321 kb on - strand at 1853.336 kb on + strand at 1853.339 kb on - strand at 1853.339 kb on - strand at 1853.376 kb on + strand at 1853.376 kb on + strand at 1853.381 kb on - strand at 1853.393 kb on + strand at 1853.393 kb on + strand at 1853.394 kb on - strand at 1853.404 kb on + strand at 1853.404 kb on + strand at 1853.409 kb on + strand at 1853.470 kb on + strand at 1853.470 kb on + strand at 1853.495 kb on - strand at 1853.628 kb on + strand, within CA264_08025 at 1853.657 kb on + strand, within CA264_08025 at 1853.707 kb on + strand, within CA264_08025 at 1853.707 kb on + strand, within CA264_08025 at 1853.707 kb on + strand, within CA264_08025 at 1853.707 kb on + strand, within CA264_08025 at 1853.707 kb on + strand, within CA264_08025 at 1853.826 kb on + strand, within CA264_08025 at 1853.865 kb on + strand, within CA264_08025 at 1853.866 kb on - strand, within CA264_08025 at 1853.904 kb on - strand, within CA264_08025 at 1853.904 kb on - strand, within CA264_08025
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 1,851,271 + +0.0 1,851,566 + CA264_08005 0.45 -0.6 1,851,965 + -1.1 1,851,965 + -0.0 1,851,966 - -0.6 1,851,969 + +0.6 1,851,969 + -0.4 1,851,970 - +0.2 1,851,972 - +0.8 1,851,978 - -0.3 1,852,163 + -2.6 1,852,197 - +0.0 1,852,210 + -0.4 1,852,264 + +0.1 1,852,270 + -0.9 1,852,270 + +0.6 1,852,271 - -0.5 1,852,271 - -0.8 1,852,271 - -0.2 1,852,271 - -0.1 1,852,435 - CA264_08015 0.25 -1.0 1,852,453 + CA264_08015 0.28 -0.6 1,852,454 - CA264_08015 0.28 +0.3 1,852,454 - CA264_08015 0.28 +0.9 1,852,454 - CA264_08015 0.28 +0.4 1,852,462 + CA264_08015 0.29 -0.4 1,852,508 + CA264_08015 0.36 +1.0 1,852,509 - CA264_08015 0.37 +0.5 1,852,541 - CA264_08015 0.41 -3.2 1,852,544 + CA264_08015 0.42 -2.0 1,852,544 + CA264_08015 0.42 -0.8 1,852,595 + CA264_08015 0.50 -0.8 1,852,596 - CA264_08015 0.50 +2.2 1,852,739 + CA264_08015 0.72 -0.7 1,852,798 - CA264_08015 0.81 -0.9 1,852,939 + -0.6 1,852,942 + +0.9 1,853,276 - -0.3 1,853,284 + -0.3 1,853,285 - -0.2 1,853,285 - +0.2 1,853,288 + -0.0 1,853,289 - -0.4 1,853,315 - +0.0 1,853,321 - +0.4 1,853,336 + -0.4 1,853,339 - -0.2 1,853,339 - -0.0 1,853,376 + +0.4 1,853,376 + +0.2 1,853,381 - -0.1 1,853,393 + +0.0 1,853,393 + +0.2 1,853,394 - +0.1 1,853,404 + -0.1 1,853,404 + +0.4 1,853,409 + +0.0 1,853,470 + -0.9 1,853,470 + -0.9 1,853,495 - -0.4 1,853,628 + CA264_08025 0.14 -1.1 1,853,657 + CA264_08025 0.15 +0.4 1,853,707 + CA264_08025 0.19 -1.4 1,853,707 + CA264_08025 0.19 +0.0 1,853,707 + CA264_08025 0.19 -1.0 1,853,707 + CA264_08025 0.19 -2.5 1,853,707 + CA264_08025 0.19 -1.2 1,853,826 + CA264_08025 0.27 -0.6 1,853,865 + CA264_08025 0.29 -0.6 1,853,866 - CA264_08025 0.29 +0.2 1,853,904 - CA264_08025 0.32 -1.7 1,853,904 - CA264_08025 0.32 -0.6
Or see this region's nucleotide sequence