Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06215 and CA264_06220 are separated by 182 nucleotides CA264_06220 and CA264_06225 are separated by 21 nucleotides CA264_06225 and CA264_06230 are separated by 49 nucleotides
CA264_06215: CA264_06215 - peptidase-C39 like family protein, at 1,446,983 to 1,447,705
_06215
CA264_06220: CA264_06220 - hypothetical protein, at 1,447,888 to 1,448,574
_06220
CA264_06225: CA264_06225 - argininosuccinate lyase, at 1,448,596 to 1,449,933
_06225
CA264_06230: CA264_06230 - acetylornithine deacetylase, at 1,449,983 to 1,451,059
_06230
Position (kb)
1448
1449
1450 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1447.624 kb on + strand, within CA264_06215 at 1447.624 kb on + strand, within CA264_06215 at 1447.635 kb on + strand at 1447.689 kb on - strand at 1447.712 kb on + strand at 1447.713 kb on - strand at 1447.732 kb on + strand at 1447.732 kb on + strand at 1447.732 kb on + strand at 1447.860 kb on + strand at 1447.862 kb on + strand at 1447.908 kb on - strand at 1448.023 kb on + strand, within CA264_06220 at 1448.024 kb on - strand, within CA264_06220 at 1448.074 kb on + strand, within CA264_06220 at 1448.202 kb on + strand, within CA264_06220 at 1448.202 kb on + strand, within CA264_06220 at 1448.286 kb on - strand, within CA264_06220 at 1448.332 kb on + strand, within CA264_06220 at 1448.547 kb on + strand at 1448.548 kb on - strand at 1448.582 kb on + strand at 1448.582 kb on + strand at 1448.583 kb on - strand at 1448.592 kb on + strand at 1448.592 kb on + strand at 1448.592 kb on + strand at 1448.597 kb on + strand at 1448.621 kb on + strand at 1448.761 kb on + strand, within CA264_06225 at 1448.761 kb on + strand, within CA264_06225 at 1448.762 kb on - strand, within CA264_06225 at 1448.783 kb on + strand, within CA264_06225 at 1448.846 kb on + strand, within CA264_06225 at 1448.847 kb on - strand, within CA264_06225 at 1448.850 kb on + strand, within CA264_06225 at 1448.851 kb on - strand, within CA264_06225 at 1448.852 kb on + strand, within CA264_06225 at 1448.853 kb on - strand, within CA264_06225 at 1448.903 kb on + strand at 1448.904 kb on - strand, within CA264_06225 at 1449.158 kb on + strand, within CA264_06225 at 1449.199 kb on + strand, within CA264_06225 at 1449.222 kb on - strand, within CA264_06225 at 1449.225 kb on + strand, within CA264_06225 at 1449.258 kb on - strand, within CA264_06225 at 1449.258 kb on - strand, within CA264_06225 at 1449.270 kb on - strand, within CA264_06225 at 1449.270 kb on - strand, within CA264_06225 at 1449.406 kb on + strand, within CA264_06225 at 1449.406 kb on + strand, within CA264_06225 at 1449.407 kb on - strand, within CA264_06225 at 1449.474 kb on + strand, within CA264_06225 at 1449.474 kb on + strand, within CA264_06225 at 1449.475 kb on - strand, within CA264_06225 at 1449.554 kb on - strand, within CA264_06225 at 1449.748 kb on + strand, within CA264_06225 at 1449.950 kb on - strand at 1450.030 kb on + strand at 1450.247 kb on + strand, within CA264_06230 at 1450.297 kb on + strand, within CA264_06230 at 1450.299 kb on + strand, within CA264_06230 at 1450.299 kb on + strand, within CA264_06230 at 1450.300 kb on - strand, within CA264_06230 at 1450.431 kb on + strand, within CA264_06230 at 1450.432 kb on - strand, within CA264_06230 at 1450.451 kb on - strand, within CA264_06230 at 1450.663 kb on + strand, within CA264_06230 at 1450.684 kb on - strand, within CA264_06230 at 1450.684 kb on - strand, within CA264_06230 at 1450.684 kb on - strand, within CA264_06230 at 1450.704 kb on + strand, within CA264_06230 at 1450.705 kb on - strand, within CA264_06230 at 1450.705 kb on - strand, within CA264_06230 at 1450.705 kb on - strand, within CA264_06230 at 1450.707 kb on + strand, within CA264_06230 at 1450.708 kb on - strand, within CA264_06230 at 1450.816 kb on - strand, within CA264_06230
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 1,447,624 + CA264_06215 0.89 -0.1 1,447,624 + CA264_06215 0.89 -0.4 1,447,635 + -0.4 1,447,689 - +0.6 1,447,712 + -0.0 1,447,713 - +0.1 1,447,732 + +0.1 1,447,732 + -0.6 1,447,732 + -0.6 1,447,860 + +0.6 1,447,862 + +0.1 1,447,908 - +0.5 1,448,023 + CA264_06220 0.20 -0.0 1,448,024 - CA264_06220 0.20 +1.2 1,448,074 + CA264_06220 0.27 +0.1 1,448,202 + CA264_06220 0.46 +0.1 1,448,202 + CA264_06220 0.46 -0.7 1,448,286 - CA264_06220 0.58 -1.9 1,448,332 + CA264_06220 0.65 -0.2 1,448,547 + -1.2 1,448,548 - -0.2 1,448,582 + -0.6 1,448,582 + +0.0 1,448,583 - -1.7 1,448,592 + -0.0 1,448,592 + +1.1 1,448,592 + -0.1 1,448,597 + +0.5 1,448,621 + +0.6 1,448,761 + CA264_06225 0.12 -1.0 1,448,761 + CA264_06225 0.12 -0.3 1,448,762 - CA264_06225 0.12 -0.2 1,448,783 + CA264_06225 0.14 -0.3 1,448,846 + CA264_06225 0.19 -0.4 1,448,847 - CA264_06225 0.19 -0.3 1,448,850 + CA264_06225 0.19 -0.8 1,448,851 - CA264_06225 0.19 -1.3 1,448,852 + CA264_06225 0.19 -0.1 1,448,853 - CA264_06225 0.19 +0.7 1,448,903 + +1.8 1,448,904 - CA264_06225 0.23 +0.5 1,449,158 + CA264_06225 0.42 +0.1 1,449,199 + CA264_06225 0.45 +0.0 1,449,222 - CA264_06225 0.47 -0.5 1,449,225 + CA264_06225 0.47 -0.1 1,449,258 - CA264_06225 0.49 +0.4 1,449,258 - CA264_06225 0.49 +0.6 1,449,270 - CA264_06225 0.50 +0.8 1,449,270 - CA264_06225 0.50 -0.9 1,449,406 + CA264_06225 0.61 +0.5 1,449,406 + CA264_06225 0.61 +0.2 1,449,407 - CA264_06225 0.61 +1.3 1,449,474 + CA264_06225 0.66 -0.7 1,449,474 + CA264_06225 0.66 -0.2 1,449,475 - CA264_06225 0.66 -0.2 1,449,554 - CA264_06225 0.72 -0.5 1,449,748 + CA264_06225 0.86 +1.6 1,449,950 - +0.3 1,450,030 + -0.8 1,450,247 + CA264_06230 0.25 -1.1 1,450,297 + CA264_06230 0.29 -1.3 1,450,299 + CA264_06230 0.29 -0.1 1,450,299 + CA264_06230 0.29 -0.1 1,450,300 - CA264_06230 0.29 +0.8 1,450,431 + CA264_06230 0.42 -0.0 1,450,432 - CA264_06230 0.42 -0.3 1,450,451 - CA264_06230 0.43 -0.4 1,450,663 + CA264_06230 0.63 -0.5 1,450,684 - CA264_06230 0.65 -0.4 1,450,684 - CA264_06230 0.65 +0.1 1,450,684 - CA264_06230 0.65 +0.6 1,450,704 + CA264_06230 0.67 -1.1 1,450,705 - CA264_06230 0.67 +0.1 1,450,705 - CA264_06230 0.67 -0.1 1,450,705 - CA264_06230 0.67 -0.6 1,450,707 + CA264_06230 0.67 -0.4 1,450,708 - CA264_06230 0.67 -1.1 1,450,816 - CA264_06230 0.77 -0.8
Or see this region's nucleotide sequence