Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00125 and CA264_00130 are separated by 30 nucleotides CA264_00130 and CA264_00135 are separated by 111 nucleotides CA264_00135 and CA264_00140 are separated by 242 nucleotides CA264_00140 and CA264_00145 are separated by 165 nucleotides
CA264_00125: CA264_00125 - hypothetical protein, at 34,408 to 35,481
_00125
CA264_00130: CA264_00130 - glyoxalase, at 35,512 to 36,021
_00130
CA264_00135: CA264_00135 - transcriptional regulator, at 36,133 to 36,453
_00135
CA264_00140: CA264_00140 - hypothetical protein, at 36,696 to 36,908
_00140
CA264_00145: CA264_00145 - DNA mismatch repair protein MutT, at 37,074 to 37,637
_00145
Position (kb) 36
37 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 35.167 kb on - strand, within CA264_00125 at 35.197 kb on - strand, within CA264_00125 at 35.412 kb on - strand at 35.412 kb on - strand at 35.437 kb on + strand at 35.438 kb on - strand at 35.440 kb on + strand at 35.441 kb on - strand at 35.475 kb on + strand at 35.475 kb on + strand at 35.481 kb on + strand at 35.481 kb on + strand at 35.481 kb on + strand at 35.482 kb on - strand at 35.486 kb on + strand at 35.486 kb on + strand at 35.486 kb on + strand at 35.486 kb on + strand at 35.487 kb on - strand at 35.507 kb on + strand at 35.517 kb on + strand at 35.517 kb on + strand at 35.517 kb on + strand at 35.518 kb on - strand at 35.522 kb on + strand at 35.537 kb on + strand at 35.537 kb on + strand at 35.561 kb on + strand at 35.593 kb on + strand, within CA264_00130 at 35.593 kb on + strand, within CA264_00130 at 35.594 kb on - strand, within CA264_00130 at 35.695 kb on - strand, within CA264_00130 at 35.695 kb on - strand, within CA264_00130 at 35.795 kb on - strand, within CA264_00130 at 35.860 kb on - strand, within CA264_00130 at 35.860 kb on - strand, within CA264_00130 at 35.915 kb on - strand, within CA264_00130 at 35.917 kb on - strand, within CA264_00130 at 35.917 kb on - strand, within CA264_00130 at 35.921 kb on + strand, within CA264_00130 at 36.186 kb on + strand, within CA264_00135 at 36.251 kb on + strand, within CA264_00135 at 36.483 kb on - strand at 36.490 kb on - strand at 36.543 kb on + strand at 36.569 kb on - strand at 36.632 kb on + strand at 36.640 kb on - strand at 36.672 kb on + strand at 36.673 kb on - strand at 36.673 kb on - strand at 36.693 kb on - strand at 36.694 kb on + strand at 36.694 kb on + strand at 36.695 kb on - strand at 36.721 kb on + strand, within CA264_00140 at 36.740 kb on + strand, within CA264_00140 at 36.748 kb on + strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.773 kb on - strand, within CA264_00140 at 36.791 kb on - strand, within CA264_00140 at 36.819 kb on + strand, within CA264_00140 at 36.868 kb on + strand, within CA264_00140 at 36.920 kb on - strand at 36.932 kb on + strand at 36.932 kb on + strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.934 kb on + strand at 36.935 kb on - strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.966 kb on - strand at 36.966 kb on - strand at 37.023 kb on - strand at 37.059 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.069 kb on + strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.074 kb on - strand at 37.142 kb on - strand, within CA264_00145 at 37.199 kb on - strand, within CA264_00145 at 37.252 kb on - strand, within CA264_00145 at 37.253 kb on + strand, within CA264_00145 at 37.253 kb on + strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.257 kb on + strand, within CA264_00145 at 37.273 kb on - strand, within CA264_00145 at 37.294 kb on - strand, within CA264_00145 at 37.306 kb on + strand, within CA264_00145 at 37.307 kb on - strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 35,167 - CA264_00125 0.71 -0.1 35,197 - CA264_00125 0.73 -0.6 35,412 - -1.2 35,412 - +0.5 35,437 + -0.0 35,438 - -0.1 35,440 + -0.6 35,441 - +0.3 35,475 + -0.7 35,475 + -0.8 35,481 + -0.6 35,481 + +0.9 35,481 + -1.4 35,482 - +0.6 35,486 + -0.9 35,486 + +1.0 35,486 + +0.2 35,486 + -1.0 35,487 - -1.0 35,507 + +0.1 35,517 + -0.7 35,517 + -0.5 35,517 + -1.6 35,518 - +0.3 35,522 + +1.7 35,537 + -0.2 35,537 + -0.3 35,561 + -0.6 35,593 + CA264_00130 0.16 -0.8 35,593 + CA264_00130 0.16 -0.5 35,594 - CA264_00130 0.16 +0.7 35,695 - CA264_00130 0.36 -0.6 35,695 - CA264_00130 0.36 -0.3 35,795 - CA264_00130 0.55 +0.1 35,860 - CA264_00130 0.68 -1.5 35,860 - CA264_00130 0.68 -0.9 35,915 - CA264_00130 0.79 +0.6 35,917 - CA264_00130 0.79 -0.9 35,917 - CA264_00130 0.79 +0.9 35,921 + CA264_00130 0.80 -1.2 36,186 + CA264_00135 0.17 -0.8 36,251 + CA264_00135 0.37 -0.6 36,483 - -0.3 36,490 - -0.0 36,543 + -1.0 36,569 - +1.6 36,632 + -0.0 36,640 - -0.6 36,672 + -0.1 36,673 - +0.6 36,673 - -0.5 36,693 - +0.8 36,694 + -1.0 36,694 + +0.9 36,695 - -0.5 36,721 + CA264_00140 0.12 -0.2 36,740 + CA264_00140 0.21 -0.4 36,748 + CA264_00140 0.24 -2.2 36,749 - CA264_00140 0.25 +0.3 36,749 - CA264_00140 0.25 -0.9 36,753 - CA264_00140 0.27 +0.1 36,753 - CA264_00140 0.27 +0.0 36,773 - CA264_00140 0.36 -0.8 36,791 - CA264_00140 0.45 -1.2 36,819 + CA264_00140 0.58 -0.3 36,868 + CA264_00140 0.81 -0.1 36,920 - +0.4 36,932 + -0.3 36,932 + -0.5 36,933 - -0.5 36,933 - -1.5 36,933 - -0.1 36,933 - -0.9 36,934 + -0.5 36,935 - -0.7 36,965 + -0.3 36,965 + -0.1 36,965 + -0.3 36,966 - -1.0 36,966 - +0.6 37,023 - -1.9 37,059 + -0.3 37,068 + -0.5 37,068 + +2.5 37,068 + +0.1 37,068 + -0.5 37,068 + +0.5 37,068 + -0.8 37,069 + -0.2 37,069 - -0.7 37,069 - -0.1 37,069 - +0.2 37,069 - +0.9 37,074 - -0.2 37,142 - CA264_00145 0.12 -0.0 37,199 - CA264_00145 0.22 +0.2 37,252 - CA264_00145 0.32 +0.7 37,253 + CA264_00145 0.32 -0.4 37,253 + CA264_00145 0.32 -0.9 37,254 - CA264_00145 0.32 +0.1 37,254 - CA264_00145 0.32 -0.2 37,254 - CA264_00145 0.32 -0.2 37,254 - CA264_00145 0.32 -2.8 37,254 - CA264_00145 0.32 -0.3 37,254 - CA264_00145 0.32 -0.2 37,254 - CA264_00145 0.32 -0.1 37,257 + CA264_00145 0.32 -0.6 37,273 - CA264_00145 0.35 -0.2 37,294 - CA264_00145 0.39 -0.2 37,306 + CA264_00145 0.41 -0.4 37,307 - CA264_00145 0.41 -0.3 37,405 + CA264_00145 0.59 +0.2 37,405 + CA264_00145 0.59 +2.9 37,405 + CA264_00145 0.59 +0.3 37,405 + CA264_00145 0.59 -0.8
Or see this region's nucleotide sequence