Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS19150 and ABIE41_RS19155 are separated by 197 nucleotides ABIE41_RS19155 and ABIE41_RS19160 are separated by 96 nucleotides
ABIE41_RS19150: ABIE41_RS19150 - TRAP transporter substrate-binding protein DctP, at 3,951,095 to 3,952,084
_RS19150
ABIE41_RS19155: ABIE41_RS19155 - GntR family transcriptional regulator, at 3,952,282 to 3,952,953
_RS19155
ABIE41_RS19160: ABIE41_RS19160 - class II fructose-bisphosphatase, at 3,953,050 to 3,954,048
_RS19160
Position (kb)
3952
3953 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3951.415 kb on - strand, within ABIE41_RS19150 at 3951.484 kb on + strand, within ABIE41_RS19150 at 3951.485 kb on - strand, within ABIE41_RS19150 at 3951.486 kb on + strand, within ABIE41_RS19150 at 3951.486 kb on + strand, within ABIE41_RS19150 at 3951.486 kb on + strand, within ABIE41_RS19150 at 3951.486 kb on + strand, within ABIE41_RS19150 at 3951.487 kb on - strand, within ABIE41_RS19150 at 3951.487 kb on - strand, within ABIE41_RS19150 at 3951.487 kb on - strand, within ABIE41_RS19150 at 3951.487 kb on - strand, within ABIE41_RS19150 at 3951.499 kb on - strand, within ABIE41_RS19150 at 3951.499 kb on - strand, within ABIE41_RS19150 at 3951.645 kb on + strand, within ABIE41_RS19150 at 3951.646 kb on - strand, within ABIE41_RS19150 at 3951.757 kb on - strand, within ABIE41_RS19150 at 3951.757 kb on - strand, within ABIE41_RS19150 at 3951.885 kb on + strand, within ABIE41_RS19150 at 3951.886 kb on - strand, within ABIE41_RS19150 at 3951.886 kb on - strand, within ABIE41_RS19150 at 3951.888 kb on + strand, within ABIE41_RS19150 at 3951.889 kb on - strand, within ABIE41_RS19150 at 3951.952 kb on + strand, within ABIE41_RS19150 at 3952.123 kb on - strand at 3952.163 kb on + strand at 3952.408 kb on + strand, within ABIE41_RS19155 at 3952.409 kb on - strand, within ABIE41_RS19155 at 3952.696 kb on + strand, within ABIE41_RS19155 at 3952.696 kb on + strand, within ABIE41_RS19155 at 3952.696 kb on + strand, within ABIE41_RS19155 at 3952.697 kb on - strand, within ABIE41_RS19155 at 3952.697 kb on - strand, within ABIE41_RS19155 at 3952.697 kb on - strand, within ABIE41_RS19155 at 3952.697 kb on - strand, within ABIE41_RS19155 at 3952.771 kb on + strand, within ABIE41_RS19155 at 3952.771 kb on + strand, within ABIE41_RS19155 at 3952.773 kb on - strand, within ABIE41_RS19155 at 3952.780 kb on + strand, within ABIE41_RS19155 at 3952.780 kb on + strand, within ABIE41_RS19155 at 3952.780 kb on + strand, within ABIE41_RS19155 at 3952.780 kb on + strand, within ABIE41_RS19155 at 3952.780 kb on + strand, within ABIE41_RS19155 at 3952.781 kb on - strand, within ABIE41_RS19155 at 3952.781 kb on - strand, within ABIE41_RS19155 at 3952.789 kb on + strand, within ABIE41_RS19155
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 3,951,415 - ABIE41_RS19150 0.32 +0.4 3,951,484 + ABIE41_RS19150 0.39 +0.3 3,951,485 - ABIE41_RS19150 0.39 +0.6 3,951,486 + ABIE41_RS19150 0.39 -0.1 3,951,486 + ABIE41_RS19150 0.39 -0.8 3,951,486 + ABIE41_RS19150 0.39 +0.3 3,951,486 + ABIE41_RS19150 0.39 -1.0 3,951,487 - ABIE41_RS19150 0.40 +0.9 3,951,487 - ABIE41_RS19150 0.40 +0.9 3,951,487 - ABIE41_RS19150 0.40 -2.0 3,951,487 - ABIE41_RS19150 0.40 -0.3 3,951,499 - ABIE41_RS19150 0.41 +0.5 3,951,499 - ABIE41_RS19150 0.41 +0.2 3,951,645 + ABIE41_RS19150 0.56 -1.6 3,951,646 - ABIE41_RS19150 0.56 +0.7 3,951,757 - ABIE41_RS19150 0.67 -0.3 3,951,757 - ABIE41_RS19150 0.67 +0.3 3,951,885 + ABIE41_RS19150 0.80 -1.9 3,951,886 - ABIE41_RS19150 0.80 +0.0 3,951,886 - ABIE41_RS19150 0.80 +0.7 3,951,888 + ABIE41_RS19150 0.80 +1.9 3,951,889 - ABIE41_RS19150 0.80 +0.5 3,951,952 + ABIE41_RS19150 0.87 -0.4 3,952,123 - +1.2 3,952,163 + -0.4 3,952,408 + ABIE41_RS19155 0.19 +0.0 3,952,409 - ABIE41_RS19155 0.19 +1.3 3,952,696 + ABIE41_RS19155 0.62 -1.8 3,952,696 + ABIE41_RS19155 0.62 +0.4 3,952,696 + ABIE41_RS19155 0.62 +0.2 3,952,697 - ABIE41_RS19155 0.62 -1.1 3,952,697 - ABIE41_RS19155 0.62 +0.6 3,952,697 - ABIE41_RS19155 0.62 -0.4 3,952,697 - ABIE41_RS19155 0.62 -0.1 3,952,771 + ABIE41_RS19155 0.73 +0.5 3,952,771 + ABIE41_RS19155 0.73 +0.1 3,952,773 - ABIE41_RS19155 0.73 +0.5 3,952,780 + ABIE41_RS19155 0.74 +0.1 3,952,780 + ABIE41_RS19155 0.74 +1.5 3,952,780 + ABIE41_RS19155 0.74 +0.1 3,952,780 + ABIE41_RS19155 0.74 +0.2 3,952,780 + ABIE41_RS19155 0.74 -0.0 3,952,781 - ABIE41_RS19155 0.74 +1.0 3,952,781 - ABIE41_RS19155 0.74 -0.4 3,952,789 + ABIE41_RS19155 0.75 -0.1
Or see this region's nucleotide sequence