Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07670

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS07660 and ABIE41_RS07665 overlap by 1 nucleotidesABIE41_RS07665 and ABIE41_RS07670 are separated by 274 nucleotidesABIE41_RS07670 and ABIE41_RS07675 overlap by 4 nucleotidesABIE41_RS07675 and ABIE41_RS07680 overlap by 4 nucleotides ABIE41_RS07660: ABIE41_RS07660 - alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase, at 1,566,348 to 1,567,487 _RS07660 ABIE41_RS07665: ABIE41_RS07665 - phosphonate C-P lyase system protein PhnL, at 1,567,487 to 1,568,185 _RS07665 ABIE41_RS07670: ABIE41_RS07670 - phosphonate C-P lyase system protein PhnK, at 1,568,460 to 1,569,266 _RS07670 ABIE41_RS07675: ABIE41_RS07675 - alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ, at 1,569,263 to 1,570,195 _RS07675 ABIE41_RS07680: ABIE41_RS07680 - carbon-phosphorus lyase complex subunit PhnI, at 1,570,192 to 1,571,394 _RS07680 Position (kb) 1568 1569 1570Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1567.522 kb on - strandat 1567.585 kb on + strand, within ABIE41_RS07665at 1567.585 kb on + strand, within ABIE41_RS07665at 1567.585 kb on + strand, within ABIE41_RS07665at 1567.586 kb on - strand, within ABIE41_RS07665at 1567.586 kb on - strand, within ABIE41_RS07665at 1567.984 kb on + strand, within ABIE41_RS07665at 1567.984 kb on + strand, within ABIE41_RS07665at 1567.985 kb on - strand, within ABIE41_RS07665at 1568.004 kb on + strand, within ABIE41_RS07665at 1568.005 kb on - strand, within ABIE41_RS07665at 1568.005 kb on - strand, within ABIE41_RS07665at 1568.005 kb on - strand, within ABIE41_RS07665at 1568.005 kb on - strand, within ABIE41_RS07665at 1568.005 kb on - strand, within ABIE41_RS07665at 1568.005 kb on - strand, within ABIE41_RS07665at 1568.463 kb on + strandat 1568.463 kb on + strandat 1568.463 kb on + strandat 1568.464 kb on - strandat 1568.464 kb on - strandat 1568.496 kb on - strandat 1568.496 kb on - strandat 1568.497 kb on + strandat 1568.667 kb on + strand, within ABIE41_RS07670at 1568.866 kb on + strand, within ABIE41_RS07670at 1569.010 kb on + strand, within ABIE41_RS07670at 1569.010 kb on + strand, within ABIE41_RS07670at 1569.010 kb on + strand, within ABIE41_RS07670at 1569.010 kb on + strand, within ABIE41_RS07670at 1569.010 kb on + strand, within ABIE41_RS07670at 1569.010 kb on + strand, within ABIE41_RS07670at 1569.010 kb on + strand, within ABIE41_RS07670at 1569.010 kb on + strand, within ABIE41_RS07670at 1569.010 kb on + strand, within ABIE41_RS07670at 1569.011 kb on - strand, within ABIE41_RS07670at 1569.011 kb on - strand, within ABIE41_RS07670at 1569.011 kb on - strand, within ABIE41_RS07670at 1569.011 kb on - strand, within ABIE41_RS07670at 1569.011 kb on - strand, within ABIE41_RS07670at 1569.011 kb on - strand, within ABIE41_RS07670at 1569.187 kb on + strandat 1569.188 kb on - strandat 1569.188 kb on - strandat 1569.188 kb on - strandat 1569.188 kb on - strandat 1569.188 kb on - strandat 1569.287 kb on + strandat 1569.287 kb on + strandat 1569.287 kb on + strandat 1569.420 kb on + strand, within ABIE41_RS07675at 1569.420 kb on + strand, within ABIE41_RS07675at 1569.420 kb on + strand, within ABIE41_RS07675at 1569.421 kb on - strand, within ABIE41_RS07675at 1569.511 kb on + strand, within ABIE41_RS07675at 1569.512 kb on - strand, within ABIE41_RS07675at 1569.512 kb on - strand, within ABIE41_RS07675at 1569.512 kb on - strand, within ABIE41_RS07675at 1569.528 kb on + strand, within ABIE41_RS07675at 1569.528 kb on + strand, within ABIE41_RS07675at 1569.529 kb on - strand, within ABIE41_RS07675at 1569.529 kb on - strand, within ABIE41_RS07675at 1569.628 kb on - strand, within ABIE41_RS07675at 1569.628 kb on - strand, within ABIE41_RS07675at 1569.651 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.657 kb on + strand, within ABIE41_RS07675at 1569.658 kb on - strand, within ABIE41_RS07675at 1569.658 kb on - strand, within ABIE41_RS07675at 1569.658 kb on - strand, within ABIE41_RS07675at 1569.658 kb on - strand, within ABIE41_RS07675at 1569.658 kb on - strand, within ABIE41_RS07675at 1569.658 kb on - strand, within ABIE41_RS07675at 1569.658 kb on - strand, within ABIE41_RS07675at 1569.658 kb on - strand, within ABIE41_RS07675at 1569.658 kb on - strand, within ABIE41_RS07675at 1569.696 kb on + strand, within ABIE41_RS07675at 1569.696 kb on + strand, within ABIE41_RS07675at 1569.696 kb on + strand, within ABIE41_RS07675at 1569.697 kb on - strand, within ABIE41_RS07675at 1569.720 kb on + strand, within ABIE41_RS07675at 1569.720 kb on + strand, within ABIE41_RS07675at 1569.802 kb on - strand, within ABIE41_RS07675at 1569.802 kb on - strand, within ABIE41_RS07675at 1570.072 kb on - strand, within ABIE41_RS07675at 1570.072 kb on - strand, within ABIE41_RS07675at 1570.094 kb on + strand, within ABIE41_RS07675at 1570.094 kb on + strand, within ABIE41_RS07675at 1570.094 kb on + strand, within ABIE41_RS07675at 1570.137 kb on + strandat 1570.137 kb on + strandat 1570.137 kb on + strandat 1570.137 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.143 kb on + strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.144 kb on - strandat 1570.149 kb on + strandat 1570.149 kb on + strandat 1570.149 kb on + strandat 1570.149 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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1,567,522 - +0.1
1,567,585 + ABIE41_RS07665 0.14 -1.5
1,567,585 + ABIE41_RS07665 0.14 -0.3
1,567,585 + ABIE41_RS07665 0.14 +1.2
1,567,586 - ABIE41_RS07665 0.14 -1.1
1,567,586 - ABIE41_RS07665 0.14 -0.3
1,567,984 + ABIE41_RS07665 0.71 -0.1
1,567,984 + ABIE41_RS07665 0.71 -0.9
1,567,985 - ABIE41_RS07665 0.71 -0.1
1,568,004 + ABIE41_RS07665 0.74 -0.6
1,568,005 - ABIE41_RS07665 0.74 +1.2
1,568,005 - ABIE41_RS07665 0.74 +1.3
1,568,005 - ABIE41_RS07665 0.74 -0.1
1,568,005 - ABIE41_RS07665 0.74 +0.4
1,568,005 - ABIE41_RS07665 0.74 +0.4
1,568,005 - ABIE41_RS07665 0.74 +0.4
1,568,463 + -0.5
1,568,463 + -0.5
1,568,463 + +0.6
1,568,464 - -0.0
1,568,464 - -0.5
1,568,496 - -0.1
1,568,496 - -0.2
1,568,497 + +0.1
1,568,667 + ABIE41_RS07670 0.26 -0.3
1,568,866 + ABIE41_RS07670 0.50 -0.0
1,569,010 + ABIE41_RS07670 0.68 +0.7
1,569,010 + ABIE41_RS07670 0.68 +1.0
1,569,010 + ABIE41_RS07670 0.68 +0.1
1,569,010 + ABIE41_RS07670 0.68 -0.3
1,569,010 + ABIE41_RS07670 0.68 +0.1
1,569,010 + ABIE41_RS07670 0.68 -0.0
1,569,010 + ABIE41_RS07670 0.68 +1.3
1,569,010 + ABIE41_RS07670 0.68 -0.0
1,569,010 + ABIE41_RS07670 0.68 +0.2
1,569,011 - ABIE41_RS07670 0.68 +0.4
1,569,011 - ABIE41_RS07670 0.68 -0.4
1,569,011 - ABIE41_RS07670 0.68 +0.1
1,569,011 - ABIE41_RS07670 0.68 +0.4
1,569,011 - ABIE41_RS07670 0.68 +1.2
1,569,011 - ABIE41_RS07670 0.68 +1.0
1,569,187 + -1.1
1,569,188 - +0.1
1,569,188 - +0.0
1,569,188 - +0.6
1,569,188 - +0.2
1,569,188 - -0.6
1,569,287 + -2.4
1,569,287 + -1.6
1,569,287 + +0.3
1,569,420 + ABIE41_RS07675 0.17 -1.0
1,569,420 + ABIE41_RS07675 0.17 +0.6
1,569,420 + ABIE41_RS07675 0.17 +1.3
1,569,421 - ABIE41_RS07675 0.17 -0.0
1,569,511 + ABIE41_RS07675 0.27 -0.5
1,569,512 - ABIE41_RS07675 0.27 +1.1
1,569,512 - ABIE41_RS07675 0.27 -0.5
1,569,512 - ABIE41_RS07675 0.27 -0.5
1,569,528 + ABIE41_RS07675 0.28 +0.4
1,569,528 + ABIE41_RS07675 0.28 -1.0
1,569,529 - ABIE41_RS07675 0.29 +0.1
1,569,529 - ABIE41_RS07675 0.29 +1.0
1,569,628 - ABIE41_RS07675 0.39 +0.5
1,569,628 - ABIE41_RS07675 0.39 -0.4
1,569,651 + ABIE41_RS07675 0.42 +2.0
1,569,657 + ABIE41_RS07675 0.42 -0.0
1,569,657 + ABIE41_RS07675 0.42 +0.9
1,569,657 + ABIE41_RS07675 0.42 +0.3
1,569,657 + ABIE41_RS07675 0.42 -0.3
1,569,657 + ABIE41_RS07675 0.42 -0.5
1,569,657 + ABIE41_RS07675 0.42 -0.2
1,569,657 + ABIE41_RS07675 0.42 +1.7
1,569,657 + ABIE41_RS07675 0.42 +0.4
1,569,657 + ABIE41_RS07675 0.42 -0.6
1,569,657 + ABIE41_RS07675 0.42 -1.6
1,569,657 + ABIE41_RS07675 0.42 -0.1
1,569,657 + ABIE41_RS07675 0.42 -0.5
1,569,657 + ABIE41_RS07675 0.42 -1.1
1,569,657 + ABIE41_RS07675 0.42 -0.3
1,569,657 + ABIE41_RS07675 0.42 +0.4
1,569,658 - ABIE41_RS07675 0.42 -0.5
1,569,658 - ABIE41_RS07675 0.42 -0.3
1,569,658 - ABIE41_RS07675 0.42 +0.4
1,569,658 - ABIE41_RS07675 0.42 -0.1
1,569,658 - ABIE41_RS07675 0.42 -1.0
1,569,658 - ABIE41_RS07675 0.42 -0.4
1,569,658 - ABIE41_RS07675 0.42 -0.3
1,569,658 - ABIE41_RS07675 0.42 +0.5
1,569,658 - ABIE41_RS07675 0.42 -0.8
1,569,696 + ABIE41_RS07675 0.46 +1.4
1,569,696 + ABIE41_RS07675 0.46 +0.8
1,569,696 + ABIE41_RS07675 0.46 +0.8
1,569,697 - ABIE41_RS07675 0.47 -0.5
1,569,720 + ABIE41_RS07675 0.49 -0.8
1,569,720 + ABIE41_RS07675 0.49 -2.3
1,569,802 - ABIE41_RS07675 0.58 +0.1
1,569,802 - ABIE41_RS07675 0.58 -0.8
1,570,072 - ABIE41_RS07675 0.87 +0.7
1,570,072 - ABIE41_RS07675 0.87 -0.1
1,570,094 + ABIE41_RS07675 0.89 -1.0
1,570,094 + ABIE41_RS07675 0.89 -0.2
1,570,094 + ABIE41_RS07675 0.89 +0.3
1,570,137 + +0.7
1,570,137 + -0.8
1,570,137 + -3.2
1,570,137 + -1.0
1,570,143 + -0.3
1,570,143 + +0.3
1,570,143 + +0.3
1,570,143 + -0.6
1,570,143 + -0.5
1,570,143 + -1.0
1,570,143 + -0.8
1,570,143 + -0.5
1,570,143 + -0.8
1,570,143 + -0.6
1,570,143 + +0.6
1,570,143 + +1.2
1,570,144 - -1.1
1,570,144 - -0.0
1,570,144 - +0.6
1,570,144 - +1.8
1,570,144 - +1.0
1,570,144 - +1.1
1,570,144 - +0.2
1,570,144 - -0.4
1,570,144 - +0.1
1,570,144 - +0.3
1,570,144 - -0.1
1,570,144 - -0.4
1,570,149 + +1.1
1,570,149 + -0.0
1,570,149 + +0.6
1,570,149 + +0.3

Or see this region's nucleotide sequence