Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS30750 and ABIE40_RS30755 are separated by 340 nucleotides ABIE40_RS30755 and ABIE40_RS30760 are separated by 305 nucleotides
ABIE40_RS30750: ABIE40_RS30750 - alpha/beta hydrolase fold domain-containing protein, at 838,253 to 839,215
_RS30750
ABIE40_RS30755: ABIE40_RS30755 - MBL fold metallo-hydrolase, at 839,556 to 840,440
_RS30755
ABIE40_RS30760: ABIE40_RS30760 - GlsB/YeaQ/YmgE family stress response membrane protein, at 840,746 to 841,003
_RS30760
Position (kb) 839
840
841 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 838.604 kb on + strand, within ABIE40_RS30750 at 838.685 kb on + strand, within ABIE40_RS30750 at 838.685 kb on + strand, within ABIE40_RS30750 at 838.814 kb on + strand, within ABIE40_RS30750 at 838.815 kb on - strand, within ABIE40_RS30750 at 838.815 kb on - strand, within ABIE40_RS30750 at 838.815 kb on - strand, within ABIE40_RS30750 at 838.985 kb on + strand, within ABIE40_RS30750 at 838.986 kb on - strand, within ABIE40_RS30750 at 838.986 kb on - strand, within ABIE40_RS30750 at 838.986 kb on - strand, within ABIE40_RS30750 at 839.097 kb on - strand, within ABIE40_RS30750 at 839.135 kb on + strand at 839.221 kb on - strand at 839.288 kb on - strand at 839.325 kb on + strand at 839.344 kb on + strand at 839.345 kb on - strand at 839.345 kb on - strand at 839.358 kb on + strand at 839.358 kb on + strand at 839.358 kb on + strand at 839.427 kb on + strand at 839.428 kb on - strand at 839.428 kb on - strand at 839.428 kb on - strand at 839.608 kb on + strand at 839.608 kb on + strand at 839.609 kb on - strand at 839.645 kb on + strand, within ABIE40_RS30755 at 839.675 kb on + strand, within ABIE40_RS30755 at 839.675 kb on + strand, within ABIE40_RS30755 at 839.676 kb on - strand, within ABIE40_RS30755 at 839.678 kb on + strand, within ABIE40_RS30755 at 839.679 kb on - strand, within ABIE40_RS30755 at 839.877 kb on - strand, within ABIE40_RS30755 at 839.928 kb on - strand, within ABIE40_RS30755 at 839.964 kb on - strand, within ABIE40_RS30755 at 839.964 kb on - strand, within ABIE40_RS30755 at 839.976 kb on + strand, within ABIE40_RS30755 at 839.977 kb on - strand, within ABIE40_RS30755 at 840.076 kb on + strand, within ABIE40_RS30755 at 840.318 kb on + strand, within ABIE40_RS30755 at 840.529 kb on + strand at 840.530 kb on - strand at 840.530 kb on - strand at 840.560 kb on + strand at 840.718 kb on + strand at 840.719 kb on - strand at 840.858 kb on + strand, within ABIE40_RS30760 at 840.858 kb on + strand, within ABIE40_RS30760 at 840.858 kb on + strand, within ABIE40_RS30760 at 840.859 kb on - strand, within ABIE40_RS30760 at 840.932 kb on + strand, within ABIE40_RS30760 at 840.933 kb on - strand, within ABIE40_RS30760 at 840.961 kb on + strand, within ABIE40_RS30760 at 840.962 kb on - strand, within ABIE40_RS30760 at 841.021 kb on + strand at 841.021 kb on + strand at 841.293 kb on + strand at 841.294 kb on - strand at 841.400 kb on + strand at 841.400 kb on + strand at 841.401 kb on - strand at 841.401 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 838,604 + ABIE40_RS30750 0.36 -0.1 838,685 + ABIE40_RS30750 0.45 +1.6 838,685 + ABIE40_RS30750 0.45 -1.5 838,814 + ABIE40_RS30750 0.58 +0.2 838,815 - ABIE40_RS30750 0.58 +0.2 838,815 - ABIE40_RS30750 0.58 -0.6 838,815 - ABIE40_RS30750 0.58 -1.0 838,985 + ABIE40_RS30750 0.76 +1.2 838,986 - ABIE40_RS30750 0.76 -0.7 838,986 - ABIE40_RS30750 0.76 +0.6 838,986 - ABIE40_RS30750 0.76 -1.6 839,097 - ABIE40_RS30750 0.88 +1.3 839,135 + +0.0 839,221 - -1.0 839,288 - -3.7 839,325 + +1.7 839,344 + +0.0 839,345 - +0.4 839,345 - -0.8 839,358 + +0.1 839,358 + +1.3 839,358 + +0.1 839,427 + -1.2 839,428 - +0.1 839,428 - -0.9 839,428 - -0.3 839,608 + -0.3 839,608 + +0.3 839,609 - -0.4 839,645 + ABIE40_RS30755 0.10 +0.6 839,675 + ABIE40_RS30755 0.13 -1.5 839,675 + ABIE40_RS30755 0.13 -1.6 839,676 - ABIE40_RS30755 0.14 -0.9 839,678 + ABIE40_RS30755 0.14 -0.2 839,679 - ABIE40_RS30755 0.14 -0.4 839,877 - ABIE40_RS30755 0.36 -0.9 839,928 - ABIE40_RS30755 0.42 -0.9 839,964 - ABIE40_RS30755 0.46 +0.1 839,964 - ABIE40_RS30755 0.46 -2.1 839,976 + ABIE40_RS30755 0.47 -0.2 839,977 - ABIE40_RS30755 0.48 +0.3 840,076 + ABIE40_RS30755 0.59 +1.8 840,318 + ABIE40_RS30755 0.86 +0.3 840,529 + -0.3 840,530 - +0.9 840,530 - -1.7 840,560 + +1.1 840,718 + +0.2 840,719 - +1.4 840,858 + ABIE40_RS30760 0.43 -1.2 840,858 + ABIE40_RS30760 0.43 -0.5 840,858 + ABIE40_RS30760 0.43 +0.5 840,859 - ABIE40_RS30760 0.44 +0.5 840,932 + ABIE40_RS30760 0.72 -1.9 840,933 - ABIE40_RS30760 0.72 +0.6 840,961 + ABIE40_RS30760 0.83 -0.1 840,962 - ABIE40_RS30760 0.84 +0.9 841,021 + +1.5 841,021 + +0.7 841,293 + +0.2 841,294 - -0.6 841,400 + -1.3 841,400 + -1.4 841,401 - -0.4 841,401 - +1.3
Or see this region's nucleotide sequence