Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS15030

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
2,954,022	-		ABIE40_RS15025	0.26	+0.3
2,954,156	+		ABIE40_RS15025	0.38	+1.5
2,954,156	+		ABIE40_RS15025	0.38	-1.1
2,954,156	+		ABIE40_RS15025	0.38	-1.1
2,954,156	+		ABIE40_RS15025	0.38	+0.9
2,954,156	+		ABIE40_RS15025	0.38	+0.1
2,954,156	+		ABIE40_RS15025	0.38	-0.7
2,954,156	+		ABIE40_RS15025	0.38	+1.3
2,954,156	+		ABIE40_RS15025	0.38	+0.6
2,954,156	+		ABIE40_RS15025	0.38	+0.9
2,954,157	-		ABIE40_RS15025	0.38	+1.3
2,954,157	-		ABIE40_RS15025	0.38	-1.8
2,954,157	-		ABIE40_RS15025	0.38	-1.5
2,954,157	-		ABIE40_RS15025	0.38	-1.1
2,954,157	-		ABIE40_RS15025	0.38	-0.2
2,954,157	-		ABIE40_RS15025	0.38	+2.9
2,954,157	-		ABIE40_RS15025	0.38	+0.2
2,954,157	-		ABIE40_RS15025	0.38	+0.6
2,954,157	-		ABIE40_RS15025	0.38	-1.0
2,954,157	-		ABIE40_RS15025	0.38	-1.3
2,954,157	-		ABIE40_RS15025	0.38	+0.8
2,954,185	+		ABIE40_RS15025	0.41	-0.4
2,954,185	+		ABIE40_RS15025	0.41	-0.9
2,954,186	-		ABIE40_RS15025	0.41	-0.5
2,954,273	+		ABIE40_RS15025	0.48	-1.0
2,954,273	+		ABIE40_RS15025	0.48	-0.1
2,954,274	-		ABIE40_RS15025	0.49	-0.3
2,954,291	+		ABIE40_RS15025	0.50	-1.0
2,954,291	+		ABIE40_RS15025	0.50	-0.2
2,954,291	+		ABIE40_RS15025	0.50	+0.3
2,954,291	+		ABIE40_RS15025	0.50	+1.3
2,954,301	+		ABIE40_RS15025	0.51	-0.6
2,954,302	-		ABIE40_RS15025	0.51	+0.2
2,954,412	-		ABIE40_RS15025	0.61	+2.1
2,954,458	+		ABIE40_RS15025	0.65	+0.9
2,954,458	+		ABIE40_RS15025	0.65	+3.4
2,954,459	-		ABIE40_RS15025	0.65	-1.3
2,954,459	-		ABIE40_RS15025	0.65	+1.1
2,954,459	-		ABIE40_RS15025	0.65	+0.3
2,954,553	-		ABIE40_RS15025	0.73	-0.7
2,954,564	+		ABIE40_RS15025	0.74	-1.2
2,954,564	+		ABIE40_RS15025	0.74	-0.0
2,954,565	-		ABIE40_RS15025	0.74	+1.0
2,954,565	-		ABIE40_RS15025	0.74	+0.5
2,954,567	+		ABIE40_RS15025	0.74	-0.3
2,954,567	+		ABIE40_RS15025	0.74	-0.1
2,954,567	+		ABIE40_RS15025	0.74	+0.9
2,954,567	+		ABIE40_RS15025	0.74	-0.3
2,954,568	-		ABIE40_RS15025	0.74	+0.4
2,954,568	-		ABIE40_RS15025	0.74	-0.3
2,954,568	-		ABIE40_RS15025	0.74	+1.3
2,954,568	-		ABIE40_RS15025	0.74	-2.4
2,954,568	-		ABIE40_RS15025	0.74	+0.1
2,954,568	-		ABIE40_RS15025	0.74	+0.4
2,954,568	-		ABIE40_RS15025	0.74	-0.0
2,954,600	+		ABIE40_RS15025	0.77	-0.9
2,954,600	+		ABIE40_RS15025	0.77	-0.6
2,954,600	+		ABIE40_RS15025	0.77	+0.4
2,954,601	-		ABIE40_RS15025	0.77	+1.0
2,954,601	-		ABIE40_RS15025	0.77	-0.5
2,954,648	+		ABIE40_RS15025	0.81	-0.2
2,954,649	-		ABIE40_RS15025	0.81	+0.3
2,954,649	-		ABIE40_RS15025	0.81	-0.5
2,954,649	-		ABIE40_RS15025	0.81	+0.7
2,954,649	-		ABIE40_RS15025	0.81	+0.8
2,954,726	+		ABIE40_RS15025	0.88	+0.4
2,954,726	+		ABIE40_RS15025	0.88	-1.1
2,954,726	+		ABIE40_RS15025	0.88	-0.2
2,954,726	+		ABIE40_RS15025	0.88	-1.1
2,954,726	+		ABIE40_RS15025	0.88	+0.0
2,954,726	+		ABIE40_RS15025	0.88	+2.4
2,954,727	-		ABIE40_RS15025	0.88	-0.5
2,954,752	+				-1.3
2,954,752	+				-0.2
2,954,752	+				-0.2
2,954,753	-				-1.5
2,954,765	-				-0.3
2,954,768	+				-2.5
2,954,768	+				+0.4
2,954,768	+				+0.6
2,954,769	-				+0.3
2,954,769	-				+0.5
2,954,792	+				-0.4
2,954,792	+				-0.5
2,954,792	+				-0.7
2,954,793	-				+0.2
2,954,793	-				-0.0
2,954,793	-				+0.1
2,954,822	+				+0.2
2,954,822	+				+0.3
2,954,822	+				-1.9
2,954,822	+				-0.5
2,954,823	-				-0.1
2,954,823	-				-2.8
2,954,823	-				-1.7
2,954,823	-				-0.2
2,954,823	-				+0.6
2,954,823	-				+2.3
2,954,823	-				+0.1
2,954,823	-				+0.4
2,954,955	-				-0.6
2,954,955	-				-0.7
2,954,957	-				+0.0
2,955,015	-		ABIE40_RS15030	0.11	+0.8
2,955,038	-		ABIE40_RS15030	0.16	+0.9
2,955,095	+		ABIE40_RS15030	0.28	-0.5
2,955,095	+		ABIE40_RS15030	0.28	-0.4
2,955,202	+		ABIE40_RS15030	0.52	-1.9
2,955,313	+		ABIE40_RS15030	0.76	-0.8
2,955,313	+		ABIE40_RS15030	0.76	-2.4
2,955,313	+		ABIE40_RS15030	0.76	+0.4
2,955,314	-		ABIE40_RS15030	0.76	-0.6
2,955,314	-		ABIE40_RS15030	0.76	-0.4
2,955,433	+				-1.3
2,955,433	+				-3.1
2,955,434	-				+0.4
2,955,478	+				+0.3
2,955,478	+				-0.7
2,955,502	+				+0.8
2,955,503	-				+0.2
2,955,634	+		ABIE40_RS15035	0.26	-0.0
2,955,634	+		ABIE40_RS15035	0.26	-1.0
2,955,635	-		ABIE40_RS15035	0.27	+3.1
2,955,635	-		ABIE40_RS15035	0.27	+1.4
2,955,635	-		ABIE40_RS15035	0.27	-1.1
2,955,688	+		ABIE40_RS15035	0.37	+0.3
2,955,688	+		ABIE40_RS15035	0.37	-0.7
2,955,688	+		ABIE40_RS15035	0.37	-0.5
2,955,688	+		ABIE40_RS15035	0.37	-0.8
2,955,689	-		ABIE40_RS15035	0.37	+0.3
2,955,689	-		ABIE40_RS15035	0.37	-1.4
2,955,689	-		ABIE40_RS15035	0.37	+0.7
2,955,689	-		ABIE40_RS15035	0.37	-0.1
2,955,865	+		ABIE40_RS15035	0.72	+0.2
2,955,865	+		ABIE40_RS15035	0.72	-0.2
2,955,865	+		ABIE40_RS15035	0.72	-0.8
2,955,866	-		ABIE40_RS15035	0.72	+0.8
2,955,866	-		ABIE40_RS15035	0.72	-0.3
2,955,866	-		ABIE40_RS15035	0.72	+1.4
2,955,978	-				-0.5
2,956,018	+				-0.8
2,956,018	+				-1.6
2,956,039	+				-1.1
2,956,039	+				+0.5
2,956,040	-				-0.6
2,956,142	+				+0.2
2,956,142	+				+2.5
2,956,191	-				-0.3
2,956,191	-				+0.3
2,956,191	-				-0.5
2,956,192	+				+0.5
2,956,193	-				+1.0
2,956,193	-				+0.2
2,956,193	-				-0.2
2,956,209	+				-0.1
2,956,210	-				+0.5
2,956,226	-				+1.3
2,956,271	+				+1.3
2,956,271	+				+0.8
2,956,287	+				+1.3
2,956,287	+				-1.5
2,956,308	-				-0.1