Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24005 and ABID97_RS24010 are separated by 4 nucleotides ABID97_RS24010 and ABID97_RS24015 are separated by 104 nucleotides ABID97_RS24015 and ABID97_RS24020 overlap by 4 nucleotides
ABID97_RS24005: ABID97_RS24005 - glutathione-regulated potassium-efflux system protein KefC, at 4,962,484 to 4,964,352
_RS24005
ABID97_RS24010: ABID97_RS24010 - amidohydrolase family protein, at 4,964,357 to 4,965,223
_RS24010
ABID97_RS24015: ABID97_RS24015 - crotonase/enoyl-CoA hydratase family protein, at 4,965,328 to 4,966,101
_RS24015
ABID97_RS24020: ABID97_RS24020 - feruloyl-CoA synthase, at 4,966,098 to 4,967,951
_RS24020
Position (kb) 4964
4965
4966 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4963.432 kb on + strand, within ABID97_RS24005 at 4963.433 kb on - strand, within ABID97_RS24005 at 4963.462 kb on + strand, within ABID97_RS24005 at 4963.651 kb on + strand, within ABID97_RS24005 at 4963.843 kb on + strand, within ABID97_RS24005 at 4963.843 kb on + strand, within ABID97_RS24005 at 4963.843 kb on + strand, within ABID97_RS24005 at 4963.844 kb on - strand, within ABID97_RS24005 at 4964.179 kb on + strand at 4964.180 kb on - strand at 4964.180 kb on - strand at 4964.188 kb on + strand at 4964.188 kb on + strand at 4964.188 kb on - strand at 4964.189 kb on - strand at 4964.520 kb on + strand, within ABID97_RS24010 at 4964.521 kb on - strand, within ABID97_RS24010 at 4964.521 kb on - strand, within ABID97_RS24010 at 4964.544 kb on + strand, within ABID97_RS24010 at 4964.799 kb on + strand, within ABID97_RS24010 at 4964.800 kb on - strand, within ABID97_RS24010 at 4964.800 kb on - strand, within ABID97_RS24010 at 4964.800 kb on - strand, within ABID97_RS24010 at 4964.800 kb on - strand, within ABID97_RS24010 at 4964.823 kb on + strand, within ABID97_RS24010 at 4965.069 kb on + strand, within ABID97_RS24010 at 4965.070 kb on - strand, within ABID97_RS24010 at 4965.115 kb on - strand, within ABID97_RS24010 at 4965.115 kb on - strand, within ABID97_RS24010 at 4965.115 kb on - strand, within ABID97_RS24010 at 4965.136 kb on - strand, within ABID97_RS24010 at 4965.147 kb on + strand at 4965.147 kb on + strand at 4965.148 kb on - strand at 4965.148 kb on - strand at 4965.244 kb on + strand at 4965.244 kb on + strand at 4965.707 kb on - strand, within ABID97_RS24015 at 4965.707 kb on - strand, within ABID97_RS24015 at 4965.820 kb on + strand, within ABID97_RS24015 at 4965.821 kb on - strand, within ABID97_RS24015 at 4965.821 kb on - strand, within ABID97_RS24015 at 4965.859 kb on + strand, within ABID97_RS24015 at 4965.859 kb on + strand, within ABID97_RS24015 at 4965.859 kb on + strand, within ABID97_RS24015 at 4965.860 kb on - strand, within ABID97_RS24015 at 4965.940 kb on + strand, within ABID97_RS24015 at 4965.940 kb on + strand, within ABID97_RS24015 at 4965.941 kb on - strand, within ABID97_RS24015
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 4,963,432 + ABID97_RS24005 0.51 -0.4 4,963,433 - ABID97_RS24005 0.51 +0.5 4,963,462 + ABID97_RS24005 0.52 +2.8 4,963,651 + ABID97_RS24005 0.62 -0.2 4,963,843 + ABID97_RS24005 0.73 -2.0 4,963,843 + ABID97_RS24005 0.73 +0.2 4,963,843 + ABID97_RS24005 0.73 -0.4 4,963,844 - ABID97_RS24005 0.73 +0.4 4,964,179 + +0.6 4,964,180 - -0.2 4,964,180 - -0.2 4,964,188 + -0.1 4,964,188 + -0.2 4,964,188 - +0.0 4,964,189 - +0.0 4,964,520 + ABID97_RS24010 0.19 -1.0 4,964,521 - ABID97_RS24010 0.19 -0.6 4,964,521 - ABID97_RS24010 0.19 +0.5 4,964,544 + ABID97_RS24010 0.22 -0.1 4,964,799 + ABID97_RS24010 0.51 -0.5 4,964,800 - ABID97_RS24010 0.51 -1.2 4,964,800 - ABID97_RS24010 0.51 +1.3 4,964,800 - ABID97_RS24010 0.51 -0.8 4,964,800 - ABID97_RS24010 0.51 +0.0 4,964,823 + ABID97_RS24010 0.54 -0.2 4,965,069 + ABID97_RS24010 0.82 +0.0 4,965,070 - ABID97_RS24010 0.82 +0.1 4,965,115 - ABID97_RS24010 0.87 +0.1 4,965,115 - ABID97_RS24010 0.87 +0.5 4,965,115 - ABID97_RS24010 0.87 +0.4 4,965,136 - ABID97_RS24010 0.90 -0.2 4,965,147 + -0.3 4,965,147 + +0.5 4,965,148 - -0.2 4,965,148 - +0.0 4,965,244 + +0.3 4,965,244 + +0.8 4,965,707 - ABID97_RS24015 0.49 +0.7 4,965,707 - ABID97_RS24015 0.49 -2.1 4,965,820 + ABID97_RS24015 0.64 +0.6 4,965,821 - ABID97_RS24015 0.64 +0.8 4,965,821 - ABID97_RS24015 0.64 -0.3 4,965,859 + ABID97_RS24015 0.69 -0.1 4,965,859 + ABID97_RS24015 0.69 +0.0 4,965,859 + ABID97_RS24015 0.69 -0.2 4,965,860 - ABID97_RS24015 0.69 +0.4 4,965,940 + ABID97_RS24015 0.79 +0.6 4,965,940 + ABID97_RS24015 0.79 -0.7 4,965,941 - ABID97_RS24015 0.79 +1.3
Or see this region's nucleotide sequence