Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS11000 and ABID97_RS11005 overlap by 4 nucleotides ABID97_RS11005 and ABID97_RS11010 are separated by 93 nucleotides ABID97_RS11010 and ABID97_RS11015 are separated by 75 nucleotides
ABID97_RS11000: ABID97_RS11000 - beta-ketoacyl-[acyl-carrier-protein] synthase family protein, at 2,277,897 to 2,279,105
_RS11000
ABID97_RS11005: ABID97_RS11005 - acyl carrier protein, at 2,279,102 to 2,279,344
_RS11005
ABID97_RS11010: ABID97_RS11010 - phosphatase PAP2 family protein, at 2,279,438 to 2,280,154
_RS11010
ABID97_RS11015: ABID97_RS11015 - helix-turn-helix transcriptional regulator, at 2,280,230 to 2,281,072
_RS11015
Position (kb)
2279
2280 Strain fitness (log2 ratio)
-2
-1
0
1 at 2278.369 kb on + strand, within ABID97_RS11000 at 2278.370 kb on - strand, within ABID97_RS11000 at 2278.370 kb on - strand, within ABID97_RS11000 at 2278.370 kb on - strand, within ABID97_RS11000 at 2278.657 kb on + strand, within ABID97_RS11000 at 2278.657 kb on + strand, within ABID97_RS11000 at 2278.658 kb on - strand, within ABID97_RS11000 at 2278.658 kb on - strand, within ABID97_RS11000 at 2278.811 kb on - strand, within ABID97_RS11000 at 2279.301 kb on + strand, within ABID97_RS11005 at 2279.302 kb on - strand, within ABID97_RS11005 at 2279.302 kb on - strand, within ABID97_RS11005 at 2279.302 kb on - strand, within ABID97_RS11005 at 2279.811 kb on + strand, within ABID97_RS11010 at 2279.811 kb on + strand, within ABID97_RS11010 at 2279.811 kb on + strand, within ABID97_RS11010 at 2279.910 kb on + strand, within ABID97_RS11010 at 2279.911 kb on - strand, within ABID97_RS11010 at 2279.911 kb on - strand, within ABID97_RS11010 at 2279.928 kb on + strand, within ABID97_RS11010 at 2279.928 kb on + strand, within ABID97_RS11010 at 2279.943 kb on + strand, within ABID97_RS11010 at 2280.028 kb on - strand, within ABID97_RS11010 at 2280.028 kb on - strand, within ABID97_RS11010
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 2,278,369 + ABID97_RS11000 0.39 -0.4 2,278,370 - ABID97_RS11000 0.39 -0.8 2,278,370 - ABID97_RS11000 0.39 -0.4 2,278,370 - ABID97_RS11000 0.39 -0.3 2,278,657 + ABID97_RS11000 0.63 +0.1 2,278,657 + ABID97_RS11000 0.63 -0.8 2,278,658 - ABID97_RS11000 0.63 -0.4 2,278,658 - ABID97_RS11000 0.63 -1.8 2,278,811 - ABID97_RS11000 0.76 +0.7 2,279,301 + ABID97_RS11005 0.82 +0.1 2,279,302 - ABID97_RS11005 0.82 -2.0 2,279,302 - ABID97_RS11005 0.82 -0.0 2,279,302 - ABID97_RS11005 0.82 -0.1 2,279,811 + ABID97_RS11010 0.52 -0.1 2,279,811 + ABID97_RS11010 0.52 -0.3 2,279,811 + ABID97_RS11010 0.52 -0.2 2,279,910 + ABID97_RS11010 0.66 -0.9 2,279,911 - ABID97_RS11010 0.66 -0.9 2,279,911 - ABID97_RS11010 0.66 -0.9 2,279,928 + ABID97_RS11010 0.68 -0.2 2,279,928 + ABID97_RS11010 0.68 -0.5 2,279,943 + ABID97_RS11010 0.70 -0.1 2,280,028 - ABID97_RS11010 0.82 -0.6 2,280,028 - ABID97_RS11010 0.82 -0.2
Or see this region's nucleotide sequence