Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24945 and IAI46_24950 are separated by 370 nucleotides IAI46_24950 and IAI46_24955 are separated by 309 nucleotides
IAI46_24945: IAI46_24945 - ribosome-dependent GTPase TypA, at 5,322,261 to 5,324,084
_24945
IAI46_24950: IAI46_24950 - glutamate--ammonia ligase, at 5,324,455 to 5,325,864
_24950
IAI46_24955: IAI46_24955 - nitrogen regulation protein NR(II), at 5,326,174 to 5,327,223
_24955
Position (kb)
5324
5325
5326 Strain fitness (log2 ratio)
-2
-1
0
1 at 5323.526 kb on - strand, within IAI46_24945 at 5323.594 kb on + strand, within IAI46_24945 at 5323.595 kb on - strand, within IAI46_24945 at 5323.708 kb on - strand, within IAI46_24945 at 5323.895 kb on + strand, within IAI46_24945 at 5324.033 kb on + strand at 5324.121 kb on + strand at 5324.122 kb on - strand at 5324.122 kb on - strand at 5324.122 kb on - strand at 5324.122 kb on - strand at 5324.128 kb on - strand at 5324.130 kb on + strand at 5324.131 kb on - strand at 5324.165 kb on + strand at 5324.166 kb on - strand at 5324.166 kb on - strand at 5324.166 kb on - strand at 5324.167 kb on + strand at 5324.168 kb on - strand at 5324.168 kb on - strand at 5324.168 kb on - strand at 5324.179 kb on + strand at 5324.179 kb on + strand at 5324.180 kb on - strand at 5324.180 kb on - strand at 5324.189 kb on + strand at 5324.190 kb on - strand at 5324.243 kb on + strand at 5324.243 kb on + strand at 5324.243 kb on + strand at 5324.244 kb on - strand at 5324.244 kb on - strand at 5324.303 kb on + strand at 5324.340 kb on - strand at 5324.435 kb on + strand at 5324.450 kb on + strand at 5324.450 kb on + strand at 5324.450 kb on + strand at 5324.454 kb on + strand at 5325.175 kb on + strand, within IAI46_24950 at 5325.900 kb on + strand at 5325.900 kb on + strand at 5325.901 kb on - strand at 5325.901 kb on - strand at 5325.981 kb on + strand at 5326.000 kb on - strand at 5326.016 kb on + strand at 5326.026 kb on - strand at 5326.046 kb on + strand at 5326.047 kb on - strand at 5326.074 kb on - strand at 5326.130 kb on - strand at 5326.130 kb on - strand at 5326.130 kb on - strand at 5326.162 kb on + strand at 5326.162 kb on + strand at 5326.163 kb on - strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.171 kb on + strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.172 kb on - strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.173 kb on + strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.174 kb on - strand at 5326.346 kb on - strand, within IAI46_24955 at 5326.443 kb on + strand, within IAI46_24955 at 5326.480 kb on + strand, within IAI46_24955 at 5326.480 kb on + strand, within IAI46_24955 at 5326.480 kb on + strand, within IAI46_24955 at 5326.480 kb on + strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.481 kb on - strand, within IAI46_24955 at 5326.483 kb on - strand, within IAI46_24955 at 5326.844 kb on - strand, within IAI46_24955
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 5,323,526 - IAI46_24945 0.69 +0.4 5,323,594 + IAI46_24945 0.73 +0.8 5,323,595 - IAI46_24945 0.73 -1.3 5,323,708 - IAI46_24945 0.79 +0.4 5,323,895 + IAI46_24945 0.90 +0.4 5,324,033 + +0.1 5,324,121 + -0.5 5,324,122 - -0.6 5,324,122 - -0.3 5,324,122 - +0.1 5,324,122 - -0.8 5,324,128 - -0.4 5,324,130 + -0.1 5,324,131 - -0.4 5,324,165 + -0.2 5,324,166 - -0.9 5,324,166 - +0.6 5,324,166 - -0.4 5,324,167 + +0.2 5,324,168 - -0.2 5,324,168 - +0.2 5,324,168 - +0.6 5,324,179 + +1.2 5,324,179 + +0.9 5,324,180 - -0.2 5,324,180 - -0.4 5,324,189 + -0.0 5,324,190 - +0.9 5,324,243 + -0.2 5,324,243 + +0.0 5,324,243 + +0.8 5,324,244 - -2.5 5,324,244 - -1.8 5,324,303 + -0.3 5,324,340 - -0.9 5,324,435 + -1.2 5,324,450 + -0.8 5,324,450 + -0.8 5,324,450 + -0.4 5,324,454 + -0.2 5,325,175 + IAI46_24950 0.51 -1.6 5,325,900 + +0.1 5,325,900 + +0.7 5,325,901 - -1.6 5,325,901 - +1.1 5,325,981 + +0.7 5,326,000 - -0.1 5,326,016 + -0.4 5,326,026 - +0.3 5,326,046 + +1.4 5,326,047 - -0.2 5,326,074 - -0.6 5,326,130 - +0.3 5,326,130 - -0.1 5,326,130 - -1.4 5,326,162 + -0.2 5,326,162 + +0.1 5,326,163 - -1.2 5,326,171 + +0.1 5,326,171 + +0.5 5,326,171 + -0.6 5,326,171 + -0.2 5,326,171 + -0.4 5,326,171 + +0.6 5,326,171 + -0.3 5,326,171 + +0.9 5,326,171 + +0.5 5,326,171 + +0.4 5,326,172 - +0.7 5,326,172 - -0.4 5,326,172 - -0.2 5,326,172 - -1.4 5,326,172 - -0.4 5,326,172 - -2.4 5,326,172 - +0.3 5,326,173 + -0.5 5,326,173 + +0.1 5,326,173 + +0.8 5,326,173 + +0.2 5,326,173 + -0.3 5,326,173 + -0.4 5,326,173 + -1.1 5,326,173 + -0.8 5,326,173 + +0.6 5,326,173 + +0.0 5,326,173 + +0.3 5,326,173 + -0.9 5,326,174 - -0.2 5,326,174 - +0.1 5,326,174 - -0.4 5,326,174 - -1.3 5,326,174 - -0.8 5,326,174 - -0.4 5,326,174 - +0.2 5,326,346 - IAI46_24955 0.16 +0.0 5,326,443 + IAI46_24955 0.26 +0.1 5,326,480 + IAI46_24955 0.29 -0.9 5,326,480 + IAI46_24955 0.29 +0.2 5,326,480 + IAI46_24955 0.29 +1.5 5,326,480 + IAI46_24955 0.29 -1.3 5,326,481 - IAI46_24955 0.29 +0.4 5,326,481 - IAI46_24955 0.29 -0.0 5,326,481 - IAI46_24955 0.29 +0.1 5,326,481 - IAI46_24955 0.29 -1.5 5,326,481 - IAI46_24955 0.29 -0.2 5,326,481 - IAI46_24955 0.29 -0.4 5,326,481 - IAI46_24955 0.29 +0.8 5,326,481 - IAI46_24955 0.29 -1.7 5,326,483 - IAI46_24955 0.29 -0.2 5,326,844 - IAI46_24955 0.64 -1.9
Or see this region's nucleotide sequence