Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24810 and IAI46_24815 are separated by 79 nucleotides IAI46_24815 and IAI46_24820 are separated by 11 nucleotides IAI46_24820 and IAI46_24825 are separated by 263 nucleotides IAI46_24825 and IAI46_24830 are separated by 180 nucleotides
IAI46_24810: IAI46_24810 - bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase, at 5,295,347 to 5,296,156
_24810
IAI46_24815: IAI46_24815 - 50S ribosomal protein L33, at 5,296,236 to 5,296,403
_24815
IAI46_24820: IAI46_24820 - 50S ribosomal protein L28, at 5,296,415 to 5,296,651
_24820
IAI46_24825: IAI46_24825 - DNA repair protein RadC, at 5,296,915 to 5,297,598
_24825
IAI46_24830: IAI46_24830 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 5,297,779 to 5,298,996
_24830
Position (kb)
5296
5297
5298 Strain fitness (log2 ratio)
-1
0
1
2 at 5295.953 kb on - strand, within IAI46_24810 at 5295.984 kb on + strand, within IAI46_24810 at 5295.984 kb on + strand, within IAI46_24810 at 5295.984 kb on + strand, within IAI46_24810 at 5295.985 kb on - strand, within IAI46_24810 at 5295.985 kb on - strand, within IAI46_24810 at 5296.107 kb on + strand at 5296.108 kb on - strand at 5296.108 kb on - strand at 5296.189 kb on - strand at 5296.884 kb on - strand at 5296.960 kb on + strand at 5296.960 kb on + strand at 5296.960 kb on + strand at 5296.960 kb on + strand at 5296.960 kb on + strand at 5296.960 kb on + strand at 5296.961 kb on - strand at 5296.963 kb on - strand at 5296.993 kb on + strand, within IAI46_24825 at 5297.056 kb on - strand, within IAI46_24825 at 5297.071 kb on - strand, within IAI46_24825 at 5297.071 kb on - strand, within IAI46_24825 at 5297.071 kb on - strand, within IAI46_24825 at 5297.071 kb on - strand, within IAI46_24825 at 5297.083 kb on - strand, within IAI46_24825 at 5297.098 kb on - strand, within IAI46_24825 at 5297.134 kb on + strand, within IAI46_24825 at 5297.134 kb on + strand, within IAI46_24825 at 5297.135 kb on - strand, within IAI46_24825 at 5297.135 kb on - strand, within IAI46_24825 at 5297.135 kb on - strand, within IAI46_24825 at 5297.154 kb on + strand, within IAI46_24825 at 5297.155 kb on - strand, within IAI46_24825 at 5297.155 kb on - strand, within IAI46_24825 at 5297.155 kb on - strand, within IAI46_24825 at 5297.155 kb on - strand, within IAI46_24825 at 5297.182 kb on - strand, within IAI46_24825 at 5297.209 kb on + strand, within IAI46_24825 at 5297.255 kb on + strand, within IAI46_24825 at 5297.255 kb on + strand, within IAI46_24825 at 5297.256 kb on - strand, within IAI46_24825 at 5297.256 kb on - strand, within IAI46_24825 at 5297.354 kb on + strand, within IAI46_24825 at 5297.355 kb on - strand, within IAI46_24825 at 5297.355 kb on - strand, within IAI46_24825 at 5297.364 kb on + strand, within IAI46_24825 at 5297.417 kb on + strand, within IAI46_24825 at 5297.440 kb on + strand, within IAI46_24825 at 5297.440 kb on + strand, within IAI46_24825 at 5297.460 kb on + strand, within IAI46_24825 at 5297.565 kb on + strand at 5297.565 kb on + strand at 5297.566 kb on - strand at 5297.566 kb on - strand at 5297.566 kb on - strand at 5297.585 kb on - strand at 5297.600 kb on - strand at 5297.662 kb on + strand at 5297.694 kb on + strand at 5297.695 kb on - strand at 5297.695 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 5,295,953 - IAI46_24810 0.75 -0.4 5,295,984 + IAI46_24810 0.79 -0.2 5,295,984 + IAI46_24810 0.79 -0.6 5,295,984 + IAI46_24810 0.79 +0.5 5,295,985 - IAI46_24810 0.79 -0.2 5,295,985 - IAI46_24810 0.79 -0.2 5,296,107 + +1.3 5,296,108 - -1.4 5,296,108 - +0.1 5,296,189 - -1.0 5,296,884 - +2.1 5,296,960 + +0.7 5,296,960 + +1.1 5,296,960 + +0.6 5,296,960 + +0.7 5,296,960 + +0.9 5,296,960 + +0.1 5,296,961 - +0.2 5,296,963 - +0.1 5,296,993 + IAI46_24825 0.11 -0.1 5,297,056 - IAI46_24825 0.21 -0.4 5,297,071 - IAI46_24825 0.23 +0.6 5,297,071 - IAI46_24825 0.23 -0.3 5,297,071 - IAI46_24825 0.23 -0.5 5,297,071 - IAI46_24825 0.23 +0.8 5,297,083 - IAI46_24825 0.25 -0.0 5,297,098 - IAI46_24825 0.27 -0.2 5,297,134 + IAI46_24825 0.32 +0.5 5,297,134 + IAI46_24825 0.32 +0.8 5,297,135 - IAI46_24825 0.32 +0.1 5,297,135 - IAI46_24825 0.32 -1.5 5,297,135 - IAI46_24825 0.32 -0.1 5,297,154 + IAI46_24825 0.35 -0.2 5,297,155 - IAI46_24825 0.35 -0.2 5,297,155 - IAI46_24825 0.35 +0.5 5,297,155 - IAI46_24825 0.35 -0.0 5,297,155 - IAI46_24825 0.35 -0.9 5,297,182 - IAI46_24825 0.39 -0.0 5,297,209 + IAI46_24825 0.43 +0.6 5,297,255 + IAI46_24825 0.50 -0.2 5,297,255 + IAI46_24825 0.50 +0.4 5,297,256 - IAI46_24825 0.50 -0.4 5,297,256 - IAI46_24825 0.50 +0.3 5,297,354 + IAI46_24825 0.64 +0.1 5,297,355 - IAI46_24825 0.64 +0.1 5,297,355 - IAI46_24825 0.64 +0.8 5,297,364 + IAI46_24825 0.66 -0.2 5,297,417 + IAI46_24825 0.73 +1.7 5,297,440 + IAI46_24825 0.77 +0.4 5,297,440 + IAI46_24825 0.77 +0.0 5,297,460 + IAI46_24825 0.80 +1.4 5,297,565 + -0.3 5,297,565 + -0.2 5,297,566 - -0.2 5,297,566 - +0.5 5,297,566 - -0.4 5,297,585 - +0.1 5,297,600 - +0.6 5,297,662 + +0.8 5,297,694 + +0.3 5,297,695 - -0.2 5,297,695 - +0.4
Or see this region's nucleotide sequence