Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24235 and IAI46_24240 are separated by 129 nucleotides IAI46_24240 and IAI46_24245 are separated by 159 nucleotides IAI46_24245 and IAI46_24250 overlap by 4 nucleotides
IAI46_24235: IAI46_24235 - 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ, at 5,166,784 to 5,167,626
_24235
IAI46_24240: IAI46_24240 - glutathione-disulfide reductase, at 5,167,756 to 5,169,108
_24240
IAI46_24245: IAI46_24245 - molybdopterin-dependent oxidoreductase, at 5,169,268 to 5,169,762
_24245
IAI46_24250: IAI46_24250 - response regulator, at 5,169,759 to 5,171,543
_24250
Position (kb) 5167
5168
5169
5170 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5166.788 kb on + strand at 5166.788 kb on + strand at 5166.788 kb on + strand at 5166.788 kb on + strand at 5166.789 kb on - strand at 5166.789 kb on - strand at 5166.789 kb on - strand at 5166.789 kb on - strand at 5166.834 kb on + strand at 5166.834 kb on + strand at 5166.834 kb on + strand at 5166.834 kb on + strand at 5166.835 kb on - strand at 5166.835 kb on - strand at 5166.835 kb on - strand at 5166.895 kb on + strand, within IAI46_24235 at 5167.024 kb on + strand, within IAI46_24235 at 5167.024 kb on + strand, within IAI46_24235 at 5167.024 kb on + strand, within IAI46_24235 at 5167.025 kb on - strand, within IAI46_24235 at 5167.025 kb on - strand, within IAI46_24235 at 5167.025 kb on - strand, within IAI46_24235 at 5167.034 kb on + strand, within IAI46_24235 at 5167.034 kb on + strand, within IAI46_24235 at 5167.035 kb on - strand, within IAI46_24235 at 5167.035 kb on - strand, within IAI46_24235 at 5167.035 kb on - strand, within IAI46_24235 at 5167.035 kb on - strand, within IAI46_24235 at 5167.035 kb on - strand, within IAI46_24235 at 5167.048 kb on - strand, within IAI46_24235 at 5167.069 kb on + strand, within IAI46_24235 at 5167.069 kb on + strand, within IAI46_24235 at 5167.069 kb on + strand, within IAI46_24235 at 5167.069 kb on + strand, within IAI46_24235 at 5167.070 kb on - strand, within IAI46_24235 at 5167.070 kb on - strand, within IAI46_24235 at 5167.070 kb on - strand, within IAI46_24235 at 5167.072 kb on + strand, within IAI46_24235 at 5167.073 kb on - strand, within IAI46_24235 at 5167.216 kb on + strand, within IAI46_24235 at 5167.217 kb on - strand, within IAI46_24235 at 5167.282 kb on + strand, within IAI46_24235 at 5167.313 kb on + strand, within IAI46_24235 at 5167.313 kb on + strand, within IAI46_24235 at 5167.313 kb on + strand, within IAI46_24235 at 5167.314 kb on - strand, within IAI46_24235 at 5167.314 kb on - strand, within IAI46_24235 at 5167.333 kb on + strand, within IAI46_24235 at 5167.333 kb on + strand, within IAI46_24235 at 5167.334 kb on - strand, within IAI46_24235 at 5167.357 kb on + strand, within IAI46_24235 at 5167.358 kb on - strand, within IAI46_24235 at 5167.358 kb on - strand, within IAI46_24235 at 5167.655 kb on + strand at 5167.664 kb on + strand at 5167.664 kb on + strand at 5167.665 kb on - strand at 5167.665 kb on - strand at 5167.665 kb on - strand at 5167.665 kb on - strand at 5167.719 kb on + strand at 5167.719 kb on + strand at 5167.769 kb on - strand at 5167.774 kb on + strand at 5167.774 kb on + strand at 5167.778 kb on + strand at 5167.778 kb on + strand at 5167.778 kb on + strand at 5167.779 kb on - strand at 5167.831 kb on + strand at 5167.831 kb on + strand at 5167.831 kb on + strand at 5167.831 kb on + strand at 5167.832 kb on - strand at 5167.832 kb on - strand at 5167.832 kb on - strand at 5167.832 kb on - strand at 5167.884 kb on - strand at 5167.951 kb on + strand, within IAI46_24240 at 5168.026 kb on + strand, within IAI46_24240 at 5168.026 kb on + strand, within IAI46_24240 at 5168.026 kb on + strand, within IAI46_24240 at 5168.026 kb on + strand, within IAI46_24240 at 5168.026 kb on + strand, within IAI46_24240 at 5168.027 kb on - strand, within IAI46_24240 at 5168.027 kb on - strand, within IAI46_24240 at 5168.029 kb on - strand, within IAI46_24240 at 5168.043 kb on + strand, within IAI46_24240 at 5168.043 kb on + strand, within IAI46_24240 at 5168.067 kb on + strand, within IAI46_24240 at 5168.157 kb on + strand, within IAI46_24240 at 5168.158 kb on - strand, within IAI46_24240 at 5168.284 kb on + strand, within IAI46_24240 at 5168.284 kb on + strand, within IAI46_24240 at 5168.284 kb on + strand, within IAI46_24240 at 5168.284 kb on + strand, within IAI46_24240 at 5168.285 kb on - strand, within IAI46_24240 at 5168.285 kb on - strand, within IAI46_24240 at 5168.286 kb on + strand, within IAI46_24240 at 5168.286 kb on + strand, within IAI46_24240 at 5168.287 kb on - strand, within IAI46_24240 at 5168.287 kb on - strand, within IAI46_24240 at 5168.287 kb on - strand, within IAI46_24240 at 5168.287 kb on - strand, within IAI46_24240 at 5168.294 kb on + strand, within IAI46_24240 at 5168.349 kb on + strand, within IAI46_24240 at 5168.350 kb on - strand, within IAI46_24240 at 5168.486 kb on + strand, within IAI46_24240 at 5168.487 kb on - strand, within IAI46_24240 at 5168.487 kb on - strand, within IAI46_24240 at 5168.605 kb on + strand, within IAI46_24240 at 5168.605 kb on + strand, within IAI46_24240 at 5168.606 kb on - strand, within IAI46_24240 at 5168.619 kb on + strand, within IAI46_24240 at 5168.620 kb on - strand, within IAI46_24240 at 5168.632 kb on - strand, within IAI46_24240 at 5168.632 kb on - strand, within IAI46_24240 at 5168.639 kb on + strand, within IAI46_24240 at 5168.640 kb on - strand, within IAI46_24240 at 5168.640 kb on - strand, within IAI46_24240 at 5168.650 kb on + strand, within IAI46_24240 at 5168.890 kb on + strand, within IAI46_24240 at 5168.890 kb on + strand, within IAI46_24240 at 5168.890 kb on + strand, within IAI46_24240 at 5169.025 kb on - strand at 5169.179 kb on - strand at 5169.179 kb on - strand at 5169.210 kb on - strand at 5169.221 kb on + strand at 5169.221 kb on + strand at 5169.221 kb on + strand at 5169.221 kb on + strand at 5169.221 kb on + strand at 5169.221 kb on + strand at 5169.221 kb on + strand at 5169.221 kb on + strand at 5169.221 kb on + strand at 5169.221 kb on + strand at 5169.222 kb on - strand at 5169.222 kb on - strand at 5169.222 kb on - strand at 5169.222 kb on - strand at 5169.222 kb on - strand at 5169.222 kb on - strand at 5169.222 kb on - strand at 5169.222 kb on - strand at 5169.223 kb on + strand at 5169.223 kb on + strand at 5169.224 kb on - strand at 5169.224 kb on - strand at 5169.224 kb on - strand at 5169.224 kb on - strand at 5169.224 kb on - strand at 5169.286 kb on - strand at 5169.409 kb on - strand, within IAI46_24245 at 5169.456 kb on + strand, within IAI46_24245 at 5169.456 kb on + strand, within IAI46_24245 at 5169.456 kb on + strand, within IAI46_24245 at 5169.457 kb on - strand, within IAI46_24245 at 5169.457 kb on - strand, within IAI46_24245 at 5169.457 kb on - strand, within IAI46_24245 at 5169.547 kb on + strand, within IAI46_24245 at 5169.547 kb on + strand, within IAI46_24245 at 5169.562 kb on + strand, within IAI46_24245 at 5169.565 kb on + strand, within IAI46_24245 at 5169.566 kb on - strand, within IAI46_24245 at 5169.617 kb on - strand, within IAI46_24245 at 5169.673 kb on + strand, within IAI46_24245 at 5169.715 kb on + strand at 5169.715 kb on + strand at 5169.836 kb on + strand at 5169.837 kb on - strand at 5169.837 kb on - strand at 5169.849 kb on + strand at 5169.849 kb on + strand at 5169.849 kb on + strand at 5169.849 kb on + strand at 5169.850 kb on - strand at 5169.850 kb on - strand at 5169.850 kb on - strand at 5169.852 kb on + strand at 5169.853 kb on - strand at 5169.853 kb on - strand at 5169.855 kb on + strand at 5169.855 kb on + strand at 5169.855 kb on + strand at 5169.855 kb on + strand at 5169.855 kb on + strand at 5169.856 kb on - strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.885 kb on + strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.886 kb on - strand at 5169.891 kb on - strand at 5169.891 kb on - strand at 5169.912 kb on + strand at 5170.032 kb on + strand, within IAI46_24250 at 5170.032 kb on + strand, within IAI46_24250 at 5170.033 kb on - strand, within IAI46_24250 at 5170.044 kb on + strand, within IAI46_24250 at 5170.083 kb on + strand, within IAI46_24250 at 5170.083 kb on + strand, within IAI46_24250 at 5170.084 kb on - strand, within IAI46_24250 at 5170.084 kb on - strand, within IAI46_24250 at 5170.099 kb on - strand, within IAI46_24250
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 5,166,788 + -0.1 5,166,788 + -0.0 5,166,788 + -0.1 5,166,788 + +0.3 5,166,789 - -1.4 5,166,789 - +0.6 5,166,789 - -0.9 5,166,789 - +0.1 5,166,834 + +0.4 5,166,834 + +0.1 5,166,834 + -0.1 5,166,834 + -0.7 5,166,835 - +0.5 5,166,835 - +0.3 5,166,835 - -0.3 5,166,895 + IAI46_24235 0.13 +0.5 5,167,024 + IAI46_24235 0.28 -0.4 5,167,024 + IAI46_24235 0.28 +1.2 5,167,024 + IAI46_24235 0.28 -0.1 5,167,025 - IAI46_24235 0.29 +0.2 5,167,025 - IAI46_24235 0.29 -0.3 5,167,025 - IAI46_24235 0.29 +0.8 5,167,034 + IAI46_24235 0.30 +1.2 5,167,034 + IAI46_24235 0.30 -0.2 5,167,035 - IAI46_24235 0.30 +0.7 5,167,035 - IAI46_24235 0.30 -0.0 5,167,035 - IAI46_24235 0.30 +0.4 5,167,035 - IAI46_24235 0.30 +1.4 5,167,035 - IAI46_24235 0.30 -0.3 5,167,048 - IAI46_24235 0.31 +0.2 5,167,069 + IAI46_24235 0.34 +0.1 5,167,069 + IAI46_24235 0.34 +0.2 5,167,069 + IAI46_24235 0.34 -0.3 5,167,069 + IAI46_24235 0.34 +0.4 5,167,070 - IAI46_24235 0.34 +0.7 5,167,070 - IAI46_24235 0.34 +0.7 5,167,070 - IAI46_24235 0.34 +0.4 5,167,072 + IAI46_24235 0.34 -0.5 5,167,073 - IAI46_24235 0.34 +0.5 5,167,216 + IAI46_24235 0.51 +0.1 5,167,217 - IAI46_24235 0.51 +1.4 5,167,282 + IAI46_24235 0.59 -0.0 5,167,313 + IAI46_24235 0.63 -0.4 5,167,313 + IAI46_24235 0.63 +0.3 5,167,313 + IAI46_24235 0.63 +0.0 5,167,314 - IAI46_24235 0.63 +1.1 5,167,314 - IAI46_24235 0.63 -0.3 5,167,333 + IAI46_24235 0.65 +0.7 5,167,333 + IAI46_24235 0.65 +0.1 5,167,334 - IAI46_24235 0.65 +0.3 5,167,357 + IAI46_24235 0.68 +0.1 5,167,358 - IAI46_24235 0.68 +0.8 5,167,358 - IAI46_24235 0.68 +0.1 5,167,655 + +0.1 5,167,664 + +0.5 5,167,664 + -0.0 5,167,665 - +1.0 5,167,665 - +0.5 5,167,665 - +0.1 5,167,665 - -0.1 5,167,719 + +0.6 5,167,719 + +0.1 5,167,769 - +0.1 5,167,774 + +0.3 5,167,774 + -0.6 5,167,778 + -0.9 5,167,778 + -0.1 5,167,778 + -0.1 5,167,779 - +0.7 5,167,831 + +0.3 5,167,831 + -0.8 5,167,831 + +1.6 5,167,831 + +0.4 5,167,832 - +0.0 5,167,832 - +0.2 5,167,832 - +0.0 5,167,832 - -0.5 5,167,884 - -0.8 5,167,951 + IAI46_24240 0.14 +1.0 5,168,026 + IAI46_24240 0.20 +0.7 5,168,026 + IAI46_24240 0.20 +0.7 5,168,026 + IAI46_24240 0.20 +0.2 5,168,026 + IAI46_24240 0.20 -0.4 5,168,026 + IAI46_24240 0.20 +0.2 5,168,027 - IAI46_24240 0.20 -0.6 5,168,027 - IAI46_24240 0.20 +1.6 5,168,029 - IAI46_24240 0.20 -0.2 5,168,043 + IAI46_24240 0.21 -0.3 5,168,043 + IAI46_24240 0.21 +0.2 5,168,067 + IAI46_24240 0.23 -0.1 5,168,157 + IAI46_24240 0.30 +0.5 5,168,158 - IAI46_24240 0.30 -2.8 5,168,284 + IAI46_24240 0.39 +0.7 5,168,284 + IAI46_24240 0.39 -0.2 5,168,284 + IAI46_24240 0.39 -0.2 5,168,284 + IAI46_24240 0.39 +0.2 5,168,285 - IAI46_24240 0.39 +1.7 5,168,285 - IAI46_24240 0.39 +1.3 5,168,286 + IAI46_24240 0.39 -0.1 5,168,286 + IAI46_24240 0.39 +1.3 5,168,287 - IAI46_24240 0.39 +0.1 5,168,287 - IAI46_24240 0.39 +0.1 5,168,287 - IAI46_24240 0.39 -0.7 5,168,287 - IAI46_24240 0.39 -1.1 5,168,294 + IAI46_24240 0.40 -0.1 5,168,349 + IAI46_24240 0.44 -0.7 5,168,350 - IAI46_24240 0.44 -1.6 5,168,486 + IAI46_24240 0.54 -0.3 5,168,487 - IAI46_24240 0.54 +0.4 5,168,487 - IAI46_24240 0.54 -0.9 5,168,605 + IAI46_24240 0.63 +0.9 5,168,605 + IAI46_24240 0.63 +0.2 5,168,606 - IAI46_24240 0.63 +0.7 5,168,619 + IAI46_24240 0.64 +0.0 5,168,620 - IAI46_24240 0.64 -0.9 5,168,632 - IAI46_24240 0.65 +0.6 5,168,632 - IAI46_24240 0.65 +0.1 5,168,639 + IAI46_24240 0.65 +0.2 5,168,640 - IAI46_24240 0.65 +1.1 5,168,640 - IAI46_24240 0.65 +0.2 5,168,650 + IAI46_24240 0.66 -0.4 5,168,890 + IAI46_24240 0.84 +0.1 5,168,890 + IAI46_24240 0.84 -0.4 5,168,890 + IAI46_24240 0.84 -0.5 5,169,025 - -0.9 5,169,179 - +0.4 5,169,179 - +1.6 5,169,210 - +1.9 5,169,221 + +0.3 5,169,221 + +0.6 5,169,221 + -0.4 5,169,221 + -0.0 5,169,221 + -0.5 5,169,221 + +1.0 5,169,221 + +1.0 5,169,221 + +0.4 5,169,221 + +0.1 5,169,221 + -0.2 5,169,222 - +1.4 5,169,222 - +0.1 5,169,222 - +0.3 5,169,222 - +1.3 5,169,222 - +0.3 5,169,222 - +0.9 5,169,222 - +0.5 5,169,222 - -0.3 5,169,223 + +0.3 5,169,223 + +0.5 5,169,224 - +0.3 5,169,224 - +1.1 5,169,224 - -0.2 5,169,224 - -0.2 5,169,224 - +0.6 5,169,286 - +0.7 5,169,409 - IAI46_24245 0.28 +0.9 5,169,456 + IAI46_24245 0.38 +0.5 5,169,456 + IAI46_24245 0.38 +0.3 5,169,456 + IAI46_24245 0.38 +0.9 5,169,457 - IAI46_24245 0.38 +0.4 5,169,457 - IAI46_24245 0.38 +0.6 5,169,457 - IAI46_24245 0.38 -0.4 5,169,547 + IAI46_24245 0.56 +1.2 5,169,547 + IAI46_24245 0.56 +0.3 5,169,562 + IAI46_24245 0.59 +0.5 5,169,565 + IAI46_24245 0.60 +0.6 5,169,566 - IAI46_24245 0.60 +0.3 5,169,617 - IAI46_24245 0.71 +0.4 5,169,673 + IAI46_24245 0.82 +0.3 5,169,715 + +0.8 5,169,715 + +0.1 5,169,836 + +0.6 5,169,837 - +0.3 5,169,837 - +1.2 5,169,849 + +0.5 5,169,849 + +1.0 5,169,849 + +0.9 5,169,849 + +1.7 5,169,850 - -0.8 5,169,850 - +0.8 5,169,850 - +0.2 5,169,852 + +1.1 5,169,853 - +0.7 5,169,853 - +0.8 5,169,855 + +1.3 5,169,855 + +0.7 5,169,855 + +0.4 5,169,855 + -0.3 5,169,855 + +0.4 5,169,856 - +0.8 5,169,885 + +0.5 5,169,885 + +0.8 5,169,885 + +0.5 5,169,885 + +0.9 5,169,885 + +0.4 5,169,885 + +1.2 5,169,885 + +1.0 5,169,885 + +0.6 5,169,885 + +0.9 5,169,885 + +0.3 5,169,885 + +0.8 5,169,885 + +0.9 5,169,885 + +0.8 5,169,886 - -0.2 5,169,886 - +0.2 5,169,886 - +1.5 5,169,886 - +1.0 5,169,886 - +0.9 5,169,886 - +1.6 5,169,886 - +0.9 5,169,886 - +0.6 5,169,886 - +0.8 5,169,886 - +0.7 5,169,886 - +0.5 5,169,886 - +0.6 5,169,886 - +1.0 5,169,886 - +1.4 5,169,886 - +0.7 5,169,886 - +0.2 5,169,891 - +0.2 5,169,891 - +0.6 5,169,912 + +0.7 5,170,032 + IAI46_24250 0.15 +1.1 5,170,032 + IAI46_24250 0.15 +1.8 5,170,033 - IAI46_24250 0.15 -0.5 5,170,044 + IAI46_24250 0.16 +0.7 5,170,083 + IAI46_24250 0.18 +0.2 5,170,083 + IAI46_24250 0.18 +0.7 5,170,084 - IAI46_24250 0.18 +1.6 5,170,084 - IAI46_24250 0.18 +1.1 5,170,099 - IAI46_24250 0.19 +0.4
Or see this region's nucleotide sequence