Strain Fitness in Serratia liquefaciens MT49 around IAI46_21310

Experiment: dichromate 20 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_21305 and IAI46_21310 are separated by 566 nucleotidesIAI46_21310 and IAI46_21315 are separated by 205 nucleotides IAI46_21305: IAI46_21305 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, at 4,512,524 to 4,515,121 _21305 IAI46_21310: IAI46_21310 - hypothetical protein, at 4,515,688 to 4,515,831 _21310 IAI46_21315: IAI46_21315 - dihydrolipoyl dehydrogenase, at 4,516,037 to 4,517,461 _21315 Position (kb) 4515 4516Strain fitness (log2 ratio) -2 -1 0 1at 4514.984 kb on + strandat 4515.150 kb on - strandat 4515.244 kb on - strandat 4515.248 kb on - strandat 4515.383 kb on - strandat 4515.406 kb on + strandat 4515.406 kb on + strandat 4515.406 kb on + strandat 4515.406 kb on + strandat 4515.407 kb on - strandat 4515.407 kb on - strandat 4515.407 kb on - strandat 4515.407 kb on - strandat 4515.407 kb on - strandat 4515.430 kb on + strandat 4515.430 kb on + strandat 4515.430 kb on + strandat 4515.430 kb on + strandat 4515.431 kb on - strandat 4515.431 kb on - strandat 4515.433 kb on + strandat 4515.445 kb on + strandat 4515.445 kb on + strandat 4515.446 kb on - strandat 4515.455 kb on - strandat 4515.508 kb on - strandat 4515.536 kb on + strandat 4515.559 kb on + strandat 4515.567 kb on + strandat 4515.576 kb on + strandat 4515.577 kb on - strandat 4515.577 kb on - strandat 4515.662 kb on + strandat 4515.663 kb on - strandat 4515.689 kb on + strandat 4515.689 kb on + strandat 4515.689 kb on + strandat 4515.921 kb on + strandat 4515.935 kb on + strandat 4515.935 kb on + strandat 4515.935 kb on + strandat 4515.935 kb on + strandat 4515.936 kb on - strandat 4515.936 kb on - strandat 4515.936 kb on - strandat 4515.936 kb on - strandat 4515.936 kb on - strandat 4515.940 kb on + strandat 4515.940 kb on + strandat 4515.940 kb on + strandat 4515.941 kb on - strandat 4516.013 kb on + strandat 4516.014 kb on - strandat 4516.039 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic
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4,514,984 + -0.1
4,515,150 - +0.1
4,515,244 - +0.9
4,515,248 - +0.4
4,515,383 - +1.3
4,515,406 + +0.3
4,515,406 + +0.8
4,515,406 + -0.3
4,515,406 + -0.2
4,515,407 - +0.3
4,515,407 - -0.7
4,515,407 - +0.5
4,515,407 - +1.3
4,515,407 - -0.5
4,515,430 + -0.5
4,515,430 + +1.6
4,515,430 + +0.1
4,515,430 + +0.7
4,515,431 - -0.3
4,515,431 - -0.3
4,515,433 + -0.2
4,515,445 + +1.0
4,515,445 + +0.2
4,515,446 - +0.4
4,515,455 - +0.1
4,515,508 - -0.0
4,515,536 + +0.3
4,515,559 + +0.6
4,515,567 + -1.1
4,515,576 + +0.8
4,515,577 - -0.0
4,515,577 - -0.2
4,515,662 + +0.0
4,515,663 - +0.3
4,515,689 + -2.0
4,515,689 + +1.0
4,515,689 + -0.7
4,515,921 + -0.3
4,515,935 + -0.4
4,515,935 + -0.1
4,515,935 + +0.2
4,515,935 + -0.2
4,515,936 - +0.8
4,515,936 - -0.6
4,515,936 - +0.5
4,515,936 - +0.4
4,515,936 - -1.0
4,515,940 + -0.1
4,515,940 + +0.8
4,515,940 + -0.1
4,515,941 - -0.1
4,516,013 + +0.6
4,516,014 - +0.1
4,516,039 - +0.3

Or see this region's nucleotide sequence