Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18885 and IAI46_18890 overlap by 4 nucleotides IAI46_18890 and IAI46_18895 are separated by 131 nucleotides IAI46_18895 and IAI46_18900 are separated by 80 nucleotides IAI46_18900 and IAI46_18905 are separated by 28 nucleotides
IAI46_18885: IAI46_18885 - phosphoribosylformylglycinamidine cyclo-ligase, at 3,973,997 to 3,975,037
_18885
IAI46_18890: IAI46_18890 - phosphoribosylglycinamide formyltransferase, at 3,975,034 to 3,975,672
_18890
IAI46_18895: IAI46_18895 - spermidine N1-acetyltransferase, at 3,975,804 to 3,976,358
_18895
IAI46_18900: IAI46_18900 - phosphate ABC transporter ATP-binding protein, at 3,976,439 to 3,977,251
_18900
IAI46_18905: IAI46_18905 - phosphate ABC transporter permease PstA, at 3,977,280 to 3,978,932
_18905
Position (kb)
3975
3976
3977 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3974.890 kb on + strand, within IAI46_18885 at 3974.990 kb on - strand at 3975.072 kb on + strand at 3975.072 kb on + strand at 3975.157 kb on + strand, within IAI46_18890 at 3975.187 kb on - strand, within IAI46_18890 at 3975.268 kb on + strand, within IAI46_18890 at 3975.298 kb on + strand, within IAI46_18890 at 3975.335 kb on - strand, within IAI46_18890 at 3975.354 kb on + strand, within IAI46_18890 at 3975.393 kb on + strand, within IAI46_18890 at 3975.559 kb on - strand, within IAI46_18890 at 3975.559 kb on - strand, within IAI46_18890 at 3975.559 kb on - strand, within IAI46_18890 at 3975.695 kb on - strand at 3975.749 kb on + strand at 3975.751 kb on + strand at 3975.777 kb on + strand at 3975.777 kb on + strand at 3975.781 kb on + strand at 3975.781 kb on + strand at 3975.781 kb on + strand at 3975.782 kb on - strand at 3975.784 kb on - strand at 3975.915 kb on + strand, within IAI46_18895 at 3975.915 kb on + strand, within IAI46_18895 at 3975.915 kb on + strand, within IAI46_18895 at 3975.916 kb on - strand, within IAI46_18895 at 3975.916 kb on - strand, within IAI46_18895 at 3975.928 kb on + strand, within IAI46_18895 at 3975.929 kb on - strand, within IAI46_18895 at 3975.945 kb on + strand, within IAI46_18895 at 3975.945 kb on + strand, within IAI46_18895 at 3975.956 kb on + strand, within IAI46_18895 at 3975.956 kb on + strand, within IAI46_18895 at 3975.957 kb on - strand, within IAI46_18895 at 3975.983 kb on + strand, within IAI46_18895 at 3975.984 kb on - strand, within IAI46_18895 at 3975.984 kb on - strand, within IAI46_18895 at 3975.986 kb on + strand, within IAI46_18895 at 3976.040 kb on + strand, within IAI46_18895 at 3976.040 kb on + strand, within IAI46_18895 at 3976.040 kb on + strand, within IAI46_18895 at 3976.040 kb on + strand, within IAI46_18895 at 3976.155 kb on + strand, within IAI46_18895 at 3976.156 kb on - strand, within IAI46_18895 at 3976.164 kb on + strand, within IAI46_18895 at 3976.165 kb on - strand, within IAI46_18895 at 3976.206 kb on + strand, within IAI46_18895 at 3976.308 kb on + strand at 3976.309 kb on - strand at 3976.309 kb on - strand at 3976.352 kb on + strand at 3976.390 kb on - strand at 3976.407 kb on + strand at 3976.408 kb on - strand at 3976.409 kb on + strand at 3976.409 kb on + strand at 3976.410 kb on - strand at 3976.410 kb on - strand at 3976.410 kb on - strand at 3976.447 kb on - strand at 3976.459 kb on + strand at 3976.459 kb on + strand at 3976.460 kb on - strand at 3976.461 kb on + strand at 3976.461 kb on + strand at 3976.461 kb on + strand at 3976.461 kb on + strand at 3976.462 kb on - strand at 3976.492 kb on + strand at 3976.492 kb on + strand at 3976.493 kb on - strand at 3976.493 kb on - strand at 3976.493 kb on - strand at 3976.515 kb on + strand at 3976.515 kb on + strand at 3976.606 kb on - strand, within IAI46_18900 at 3976.606 kb on - strand, within IAI46_18900 at 3976.947 kb on - strand, within IAI46_18900 at 3977.038 kb on + strand, within IAI46_18900 at 3977.038 kb on + strand, within IAI46_18900 at 3977.116 kb on + strand, within IAI46_18900 at 3977.188 kb on + strand at 3977.189 kb on - strand at 3977.252 kb on + strand at 3977.253 kb on - strand at 3977.269 kb on + strand at 3977.269 kb on + strand at 3977.269 kb on + strand at 3977.281 kb on + strand at 3977.299 kb on + strand at 3977.350 kb on - strand at 3977.352 kb on + strand at 3977.353 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,974,890 + IAI46_18885 0.86 -1.5 3,974,990 - -1.8 3,975,072 + +0.1 3,975,072 + -0.4 3,975,157 + IAI46_18890 0.19 -0.9 3,975,187 - IAI46_18890 0.24 -0.6 3,975,268 + IAI46_18890 0.37 -1.3 3,975,298 + IAI46_18890 0.41 -2.3 3,975,335 - IAI46_18890 0.47 -0.7 3,975,354 + IAI46_18890 0.50 -0.1 3,975,393 + IAI46_18890 0.56 -1.9 3,975,559 - IAI46_18890 0.82 -0.4 3,975,559 - IAI46_18890 0.82 +0.9 3,975,559 - IAI46_18890 0.82 -0.1 3,975,695 - +0.4 3,975,749 + +0.9 3,975,751 + +0.4 3,975,777 + +0.5 3,975,777 + +0.1 3,975,781 + -0.2 3,975,781 + +0.4 3,975,781 + +0.2 3,975,782 - +0.1 3,975,784 - +1.5 3,975,915 + IAI46_18895 0.20 -0.3 3,975,915 + IAI46_18895 0.20 +0.1 3,975,915 + IAI46_18895 0.20 -0.3 3,975,916 - IAI46_18895 0.20 -0.0 3,975,916 - IAI46_18895 0.20 +0.5 3,975,928 + IAI46_18895 0.22 +0.2 3,975,929 - IAI46_18895 0.23 +0.3 3,975,945 + IAI46_18895 0.25 -0.5 3,975,945 + IAI46_18895 0.25 +0.2 3,975,956 + IAI46_18895 0.27 +0.1 3,975,956 + IAI46_18895 0.27 -1.1 3,975,957 - IAI46_18895 0.28 +0.7 3,975,983 + IAI46_18895 0.32 +0.0 3,975,984 - IAI46_18895 0.32 +0.1 3,975,984 - IAI46_18895 0.32 +0.4 3,975,986 + IAI46_18895 0.33 +0.3 3,976,040 + IAI46_18895 0.43 +0.2 3,976,040 + IAI46_18895 0.43 -0.0 3,976,040 + IAI46_18895 0.43 -0.0 3,976,040 + IAI46_18895 0.43 -0.4 3,976,155 + IAI46_18895 0.63 +0.9 3,976,156 - IAI46_18895 0.63 -2.5 3,976,164 + IAI46_18895 0.65 +0.6 3,976,165 - IAI46_18895 0.65 -0.1 3,976,206 + IAI46_18895 0.72 -0.3 3,976,308 + -1.2 3,976,309 - +1.4 3,976,309 - -1.0 3,976,352 + -0.2 3,976,390 - -0.7 3,976,407 + +0.6 3,976,408 - +0.1 3,976,409 + +0.2 3,976,409 + +0.4 3,976,410 - -0.3 3,976,410 - +0.6 3,976,410 - -1.1 3,976,447 - +1.0 3,976,459 + -0.1 3,976,459 + +0.8 3,976,460 - -0.1 3,976,461 + -0.6 3,976,461 + -0.4 3,976,461 + +0.2 3,976,461 + +0.6 3,976,462 - +0.7 3,976,492 + +0.7 3,976,492 + +0.2 3,976,493 - +0.9 3,976,493 - +0.3 3,976,493 - +1.9 3,976,515 + -0.7 3,976,515 + -0.2 3,976,606 - IAI46_18900 0.21 +0.2 3,976,606 - IAI46_18900 0.21 +0.7 3,976,947 - IAI46_18900 0.62 +0.7 3,977,038 + IAI46_18900 0.74 +0.1 3,977,038 + IAI46_18900 0.74 +0.2 3,977,116 + IAI46_18900 0.83 +0.8 3,977,188 + +1.0 3,977,189 - -0.3 3,977,252 + +0.3 3,977,253 - +0.1 3,977,269 + +1.0 3,977,269 + +0.3 3,977,269 + -0.3 3,977,281 + +0.8 3,977,299 + +0.7 3,977,350 - +0.4 3,977,352 + -0.1 3,977,353 - -0.4
Or see this region's nucleotide sequence