Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17980 and IAI46_17985 are separated by 68 nucleotides IAI46_17985 and IAI46_17990 are separated by 204 nucleotides IAI46_17990 and IAI46_17995 are separated by 210 nucleotides
IAI46_17980: IAI46_17980 - copper-binding protein, at 3,791,366 to 3,791,689
_17980
IAI46_17985: IAI46_17985 - hypothetical protein, at 3,791,758 to 3,792,180
_17985
IAI46_17990: IAI46_17990 - hypothetical protein, at 3,792,385 to 3,792,606
_17990
IAI46_17995: IAI46_17995 - beta-ketoacyl-ACP synthase I, at 3,792,817 to 3,794,031
_17995
Position (kb)
3792
3793 Strain fitness (log2 ratio)
-1
0
1
2 at 3791.454 kb on - strand, within IAI46_17980 at 3791.679 kb on - strand at 3791.708 kb on + strand at 3791.759 kb on + strand at 3791.760 kb on - strand at 3791.823 kb on + strand, within IAI46_17985 at 3791.823 kb on + strand, within IAI46_17985 at 3791.856 kb on + strand, within IAI46_17985 at 3791.856 kb on + strand, within IAI46_17985 at 3791.857 kb on - strand, within IAI46_17985 at 3792.009 kb on + strand, within IAI46_17985 at 3792.009 kb on + strand, within IAI46_17985 at 3792.009 kb on + strand, within IAI46_17985 at 3792.010 kb on - strand, within IAI46_17985 at 3792.010 kb on - strand, within IAI46_17985 at 3792.010 kb on - strand, within IAI46_17985 at 3792.079 kb on - strand, within IAI46_17985 at 3792.106 kb on + strand, within IAI46_17985 at 3792.129 kb on + strand, within IAI46_17985 at 3792.203 kb on + strand at 3792.204 kb on - strand at 3792.212 kb on + strand at 3792.212 kb on + strand at 3792.213 kb on - strand at 3792.213 kb on - strand at 3792.213 kb on - strand at 3792.213 kb on - strand at 3792.213 kb on - strand at 3792.287 kb on + strand at 3792.358 kb on + strand at 3792.386 kb on + strand at 3792.387 kb on - strand at 3792.528 kb on - strand, within IAI46_17990 at 3792.642 kb on - strand at 3792.654 kb on - strand at 3792.675 kb on + strand at 3792.676 kb on - strand at 3792.768 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,791,454 - IAI46_17980 0.27 +0.6 3,791,679 - -0.0 3,791,708 + -0.2 3,791,759 + +0.1 3,791,760 - +1.9 3,791,823 + IAI46_17985 0.15 +1.6 3,791,823 + IAI46_17985 0.15 +0.8 3,791,856 + IAI46_17985 0.23 -0.4 3,791,856 + IAI46_17985 0.23 -0.2 3,791,857 - IAI46_17985 0.23 +0.5 3,792,009 + IAI46_17985 0.59 -0.2 3,792,009 + IAI46_17985 0.59 -0.1 3,792,009 + IAI46_17985 0.59 -0.0 3,792,010 - IAI46_17985 0.60 -0.7 3,792,010 - IAI46_17985 0.60 -0.5 3,792,010 - IAI46_17985 0.60 +0.4 3,792,079 - IAI46_17985 0.76 +0.4 3,792,106 + IAI46_17985 0.82 -0.2 3,792,129 + IAI46_17985 0.88 -0.6 3,792,203 + -0.4 3,792,204 - +0.1 3,792,212 + +0.7 3,792,212 + -0.4 3,792,213 - +0.7 3,792,213 - +0.5 3,792,213 - -0.0 3,792,213 - +0.2 3,792,213 - +1.1 3,792,287 + +1.1 3,792,358 + -0.2 3,792,386 + +0.5 3,792,387 - -0.3 3,792,528 - IAI46_17990 0.64 +0.3 3,792,642 - -0.2 3,792,654 - +1.0 3,792,675 + -0.3 3,792,676 - +0.2 3,792,768 + +1.4
Or see this region's nucleotide sequence