Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17780 and IAI46_17785 are separated by 44 nucleotides IAI46_17785 and IAI46_17790 are separated by 18 nucleotides IAI46_17790 and IAI46_17795 overlap by 4 nucleotides IAI46_17795 and IAI46_17800 are separated by 85 nucleotides
IAI46_17780: IAI46_17780 - TIGR01777 family protein, at 3,747,951 to 3,748,865
_17780
IAI46_17785: IAI46_17785 - histidine ABC transporter ATP-binding protein HisP, at 3,748,910 to 3,749,683
_17785
IAI46_17790: IAI46_17790 - ABC transporter permease, at 3,749,702 to 3,750,406
_17790
IAI46_17795: IAI46_17795 - histidine ABC transporter permease HisQ, at 3,750,403 to 3,751,089
_17795
IAI46_17800: IAI46_17800 - histidine ABC transporter substrate-binding protein HisJ, at 3,751,175 to 3,751,957
_17800
Position (kb)
3749
3750
3751 Strain fitness (log2 ratio)
-2
-1
0
1 at 3748.873 kb on + strand at 3748.874 kb on - strand at 3748.874 kb on - strand at 3748.874 kb on - strand at 3748.875 kb on + strand at 3749.162 kb on + strand, within IAI46_17785 at 3749.163 kb on - strand, within IAI46_17785 at 3749.239 kb on - strand, within IAI46_17785 at 3749.281 kb on - strand, within IAI46_17785 at 3749.447 kb on - strand, within IAI46_17785 at 3749.480 kb on - strand, within IAI46_17785 at 3749.582 kb on - strand, within IAI46_17785 at 3749.582 kb on - strand, within IAI46_17785 at 3749.582 kb on - strand, within IAI46_17785 at 3749.612 kb on + strand at 3749.640 kb on + strand at 3749.641 kb on - strand at 3749.648 kb on - strand at 3749.671 kb on + strand at 3749.683 kb on + strand at 3749.701 kb on - strand at 3749.710 kb on + strand at 3749.756 kb on + strand at 3749.763 kb on + strand at 3749.778 kb on + strand, within IAI46_17790 at 3749.779 kb on - strand, within IAI46_17790 at 3749.779 kb on - strand, within IAI46_17790 at 3749.779 kb on - strand, within IAI46_17790 at 3749.805 kb on + strand, within IAI46_17790 at 3749.806 kb on - strand, within IAI46_17790 at 3749.817 kb on + strand, within IAI46_17790 at 3749.817 kb on + strand, within IAI46_17790 at 3749.818 kb on - strand, within IAI46_17790 at 3749.915 kb on - strand, within IAI46_17790 at 3749.920 kb on - strand, within IAI46_17790 at 3749.992 kb on - strand, within IAI46_17790 at 3749.992 kb on - strand, within IAI46_17790 at 3750.059 kb on - strand, within IAI46_17790 at 3750.060 kb on + strand, within IAI46_17790 at 3750.159 kb on + strand, within IAI46_17790 at 3750.159 kb on + strand, within IAI46_17790 at 3750.160 kb on - strand, within IAI46_17790 at 3750.171 kb on + strand, within IAI46_17790 at 3750.193 kb on - strand, within IAI46_17790 at 3750.193 kb on - strand, within IAI46_17790 at 3750.216 kb on + strand, within IAI46_17790 at 3750.216 kb on + strand, within IAI46_17790 at 3750.221 kb on - strand, within IAI46_17790 at 3750.222 kb on + strand, within IAI46_17790 at 3750.222 kb on + strand, within IAI46_17790 at 3750.222 kb on + strand, within IAI46_17790 at 3750.223 kb on - strand, within IAI46_17790 at 3750.223 kb on - strand, within IAI46_17790 at 3750.384 kb on + strand at 3750.385 kb on - strand at 3750.406 kb on + strand at 3750.407 kb on - strand at 3750.407 kb on - strand at 3750.528 kb on - strand, within IAI46_17795 at 3750.670 kb on - strand, within IAI46_17795 at 3750.670 kb on - strand, within IAI46_17795 at 3750.679 kb on + strand, within IAI46_17795 at 3750.779 kb on + strand, within IAI46_17795 at 3750.780 kb on - strand, within IAI46_17795 at 3750.780 kb on - strand, within IAI46_17795 at 3750.784 kb on - strand, within IAI46_17795 at 3750.901 kb on + strand, within IAI46_17795 at 3750.935 kb on + strand, within IAI46_17795 at 3750.935 kb on + strand, within IAI46_17795 at 3750.936 kb on - strand, within IAI46_17795 at 3751.064 kb on - strand at 3751.076 kb on + strand at 3751.077 kb on - strand at 3751.091 kb on + strand at 3751.091 kb on + strand at 3751.092 kb on - strand at 3751.092 kb on - strand at 3751.109 kb on + strand at 3751.110 kb on - strand at 3751.203 kb on + strand at 3751.313 kb on + strand, within IAI46_17800 at 3751.359 kb on + strand, within IAI46_17800 at 3751.360 kb on - strand, within IAI46_17800
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,748,873 + +0.1 3,748,874 - -0.7 3,748,874 - -0.7 3,748,874 - -0.6 3,748,875 + -0.1 3,749,162 + IAI46_17785 0.33 -1.0 3,749,163 - IAI46_17785 0.33 -1.1 3,749,239 - IAI46_17785 0.43 +0.7 3,749,281 - IAI46_17785 0.48 +0.4 3,749,447 - IAI46_17785 0.69 -0.2 3,749,480 - IAI46_17785 0.74 +0.2 3,749,582 - IAI46_17785 0.87 -0.2 3,749,582 - IAI46_17785 0.87 -0.5 3,749,582 - IAI46_17785 0.87 +0.3 3,749,612 + -2.2 3,749,640 + +0.5 3,749,641 - +0.5 3,749,648 - +0.7 3,749,671 + +1.6 3,749,683 + +0.3 3,749,701 - -0.5 3,749,710 + +0.7 3,749,756 + -0.3 3,749,763 + +0.8 3,749,778 + IAI46_17790 0.11 -0.2 3,749,779 - IAI46_17790 0.11 -0.3 3,749,779 - IAI46_17790 0.11 +0.5 3,749,779 - IAI46_17790 0.11 -0.1 3,749,805 + IAI46_17790 0.15 -0.3 3,749,806 - IAI46_17790 0.15 +0.7 3,749,817 + IAI46_17790 0.16 +0.3 3,749,817 + IAI46_17790 0.16 -0.9 3,749,818 - IAI46_17790 0.16 +0.2 3,749,915 - IAI46_17790 0.30 +0.4 3,749,920 - IAI46_17790 0.31 +1.7 3,749,992 - IAI46_17790 0.41 +0.4 3,749,992 - IAI46_17790 0.41 +0.1 3,750,059 - IAI46_17790 0.51 +0.1 3,750,060 + IAI46_17790 0.51 -0.7 3,750,159 + IAI46_17790 0.65 +1.1 3,750,159 + IAI46_17790 0.65 +1.1 3,750,160 - IAI46_17790 0.65 +0.5 3,750,171 + IAI46_17790 0.67 -0.1 3,750,193 - IAI46_17790 0.70 -2.1 3,750,193 - IAI46_17790 0.70 +0.5 3,750,216 + IAI46_17790 0.73 -0.3 3,750,216 + IAI46_17790 0.73 -0.1 3,750,221 - IAI46_17790 0.74 -0.1 3,750,222 + IAI46_17790 0.74 +0.1 3,750,222 + IAI46_17790 0.74 -0.6 3,750,222 + IAI46_17790 0.74 +0.3 3,750,223 - IAI46_17790 0.74 +0.4 3,750,223 - IAI46_17790 0.74 +0.9 3,750,384 + +0.8 3,750,385 - -1.2 3,750,406 + -1.2 3,750,407 - +0.1 3,750,407 - -0.1 3,750,528 - IAI46_17795 0.18 +0.6 3,750,670 - IAI46_17795 0.39 +0.2 3,750,670 - IAI46_17795 0.39 -0.2 3,750,679 + IAI46_17795 0.40 +0.1 3,750,779 + IAI46_17795 0.55 -0.2 3,750,780 - IAI46_17795 0.55 -0.1 3,750,780 - IAI46_17795 0.55 -0.4 3,750,784 - IAI46_17795 0.55 +0.1 3,750,901 + IAI46_17795 0.72 +0.5 3,750,935 + IAI46_17795 0.77 +1.4 3,750,935 + IAI46_17795 0.77 +0.4 3,750,936 - IAI46_17795 0.78 -0.4 3,751,064 - -1.1 3,751,076 + -0.0 3,751,077 - -1.1 3,751,091 + +0.6 3,751,091 + +0.0 3,751,092 - +0.3 3,751,092 - +1.6 3,751,109 + +0.8 3,751,110 - +0.2 3,751,203 + -0.5 3,751,313 + IAI46_17800 0.18 +0.1 3,751,359 + IAI46_17800 0.23 +0.4 3,751,360 - IAI46_17800 0.24 +0.2
Or see this region's nucleotide sequence