Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17735 and IAI46_17740 are separated by 16 nucleotides IAI46_17740 and IAI46_17745 are separated by 146 nucleotides IAI46_17745 and IAI46_17750 are separated by 354 nucleotides
IAI46_17735: IAI46_17735 - sugar phosphatase, at 3,739,728 to 3,740,384
_17735
IAI46_17740: IAI46_17740 - YfbU family protein, at 3,740,401 to 3,740,895
_17740
IAI46_17745: IAI46_17745 - DUF412 domain-containing protein, at 3,741,042 to 3,741,497
_17745
IAI46_17750: IAI46_17750 - acetate kinase, at 3,741,852 to 3,743,054
_17750
Position (kb)
3741
3742 Strain fitness (log2 ratio)
-2
-1
0
1 at 3740.049 kb on + strand, within IAI46_17735 at 3740.219 kb on + strand, within IAI46_17735 at 3740.238 kb on - strand, within IAI46_17735 at 3740.258 kb on + strand, within IAI46_17735 at 3740.323 kb on - strand at 3740.444 kb on + strand at 3740.470 kb on - strand, within IAI46_17740 at 3740.470 kb on - strand, within IAI46_17740 at 3740.478 kb on + strand, within IAI46_17740 at 3740.478 kb on + strand, within IAI46_17740 at 3740.479 kb on - strand, within IAI46_17740 at 3740.544 kb on + strand, within IAI46_17740 at 3740.546 kb on + strand, within IAI46_17740 at 3740.546 kb on + strand, within IAI46_17740 at 3740.547 kb on - strand, within IAI46_17740 at 3740.579 kb on + strand, within IAI46_17740 at 3740.579 kb on + strand, within IAI46_17740 at 3740.579 kb on + strand, within IAI46_17740 at 3740.580 kb on - strand, within IAI46_17740 at 3740.644 kb on - strand, within IAI46_17740 at 3740.644 kb on - strand, within IAI46_17740 at 3740.709 kb on + strand, within IAI46_17740 at 3740.852 kb on + strand at 3740.852 kb on + strand at 3740.853 kb on - strand at 3740.853 kb on - strand at 3740.945 kb on + strand at 3741.038 kb on - strand at 3741.043 kb on + strand at 3741.043 kb on + strand at 3741.065 kb on + strand at 3741.113 kb on - strand, within IAI46_17745 at 3741.171 kb on + strand, within IAI46_17745 at 3741.172 kb on - strand, within IAI46_17745 at 3741.172 kb on - strand, within IAI46_17745 at 3741.172 kb on - strand, within IAI46_17745 at 3741.327 kb on - strand, within IAI46_17745 at 3741.347 kb on + strand, within IAI46_17745 at 3741.436 kb on + strand, within IAI46_17745 at 3741.436 kb on + strand, within IAI46_17745 at 3741.437 kb on - strand, within IAI46_17745 at 3741.437 kb on - strand, within IAI46_17745 at 3741.471 kb on + strand at 3741.503 kb on - strand at 3741.544 kb on + strand at 3741.545 kb on - strand at 3741.602 kb on + strand at 3741.603 kb on - strand at 3741.635 kb on + strand at 3741.635 kb on + strand at 3741.820 kb on + strand at 3741.834 kb on - strand at 3741.837 kb on + strand at 3741.837 kb on + strand at 3741.838 kb on - strand at 3741.841 kb on + strand at 3741.845 kb on + strand at 3741.861 kb on - strand at 3741.865 kb on + strand at 3741.909 kb on - strand at 3742.056 kb on + strand, within IAI46_17750 at 3742.056 kb on + strand, within IAI46_17750 at 3742.057 kb on - strand, within IAI46_17750 at 3742.064 kb on + strand, within IAI46_17750 at 3742.065 kb on - strand, within IAI46_17750 at 3742.065 kb on - strand, within IAI46_17750 at 3742.070 kb on + strand, within IAI46_17750 at 3742.070 kb on + strand, within IAI46_17750 at 3742.163 kb on - strand, within IAI46_17750 at 3742.335 kb on + strand, within IAI46_17750 at 3742.341 kb on + strand, within IAI46_17750 at 3742.354 kb on - strand, within IAI46_17750
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,740,049 + IAI46_17735 0.49 -0.6 3,740,219 + IAI46_17735 0.75 -0.4 3,740,238 - IAI46_17735 0.78 -0.8 3,740,258 + IAI46_17735 0.81 +1.0 3,740,323 - +0.3 3,740,444 + +0.7 3,740,470 - IAI46_17740 0.14 -0.4 3,740,470 - IAI46_17740 0.14 -0.7 3,740,478 + IAI46_17740 0.16 +0.0 3,740,478 + IAI46_17740 0.16 -0.6 3,740,479 - IAI46_17740 0.16 +0.4 3,740,544 + IAI46_17740 0.29 -0.2 3,740,546 + IAI46_17740 0.29 +0.1 3,740,546 + IAI46_17740 0.29 +0.2 3,740,547 - IAI46_17740 0.29 +0.3 3,740,579 + IAI46_17740 0.36 -1.0 3,740,579 + IAI46_17740 0.36 +0.8 3,740,579 + IAI46_17740 0.36 -1.8 3,740,580 - IAI46_17740 0.36 +0.3 3,740,644 - IAI46_17740 0.49 +0.3 3,740,644 - IAI46_17740 0.49 +0.0 3,740,709 + IAI46_17740 0.62 +0.1 3,740,852 + +0.3 3,740,852 + -0.3 3,740,853 - +0.2 3,740,853 - +0.6 3,740,945 + -0.2 3,741,038 - -0.1 3,741,043 + +0.5 3,741,043 + +0.1 3,741,065 + +1.0 3,741,113 - IAI46_17745 0.16 +0.4 3,741,171 + IAI46_17745 0.28 +0.3 3,741,172 - IAI46_17745 0.29 +0.3 3,741,172 - IAI46_17745 0.29 -0.1 3,741,172 - IAI46_17745 0.29 +0.6 3,741,327 - IAI46_17745 0.62 +0.2 3,741,347 + IAI46_17745 0.67 -0.7 3,741,436 + IAI46_17745 0.86 +0.4 3,741,436 + IAI46_17745 0.86 +1.0 3,741,437 - IAI46_17745 0.87 +0.8 3,741,437 - IAI46_17745 0.87 -0.1 3,741,471 + -0.3 3,741,503 - +0.2 3,741,544 + -0.7 3,741,545 - +0.1 3,741,602 + -1.1 3,741,603 - +0.3 3,741,635 + -0.3 3,741,635 + -0.8 3,741,820 + +0.8 3,741,834 - -1.6 3,741,837 + -0.6 3,741,837 + -0.2 3,741,838 - -0.2 3,741,841 + +0.6 3,741,845 + -0.3 3,741,861 - +0.2 3,741,865 + +1.6 3,741,909 - -1.4 3,742,056 + IAI46_17750 0.17 -1.2 3,742,056 + IAI46_17750 0.17 -0.2 3,742,057 - IAI46_17750 0.17 -0.9 3,742,064 + IAI46_17750 0.18 +0.6 3,742,065 - IAI46_17750 0.18 +0.3 3,742,065 - IAI46_17750 0.18 -1.3 3,742,070 + IAI46_17750 0.18 -0.2 3,742,070 + IAI46_17750 0.18 +1.2 3,742,163 - IAI46_17750 0.26 -1.0 3,742,335 + IAI46_17750 0.40 -0.9 3,742,341 + IAI46_17750 0.41 -0.0 3,742,354 - IAI46_17750 0.42 +1.7
Or see this region's nucleotide sequence