Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17460 and IAI46_17465 are separated by 212 nucleotides IAI46_17465 and IAI46_17470 are separated by 60 nucleotides IAI46_17470 and IAI46_17475 are separated by 397 nucleotides
IAI46_17460: IAI46_17460 - DNA topoisomerase (ATP-hydrolyzing) subunit A, at 3,668,263 to 3,670,914
_17460
IAI46_17465: IAI46_17465 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 3,671,127 to 3,671,852
_17465
IAI46_17470: IAI46_17470 - FadR family transcriptional regulator, at 3,671,913 to 3,672,641
_17470
IAI46_17475: IAI46_17475 - RraA family protein, at 3,673,039 to 3,673,725
_17475
Position (kb)
3671
3672
3673 Strain fitness (log2 ratio)
-1
0
1 at 3670.973 kb on - strand at 3670.973 kb on - strand at 3670.973 kb on - strand at 3670.979 kb on - strand at 3670.997 kb on + strand at 3671.037 kb on + strand at 3671.037 kb on + strand at 3671.037 kb on + strand at 3671.037 kb on + strand at 3671.037 kb on + strand at 3671.037 kb on + strand at 3671.037 kb on + strand at 3671.037 kb on + strand at 3671.037 kb on + strand at 3671.038 kb on - strand at 3671.039 kb on + strand at 3671.039 kb on + strand at 3671.039 kb on + strand at 3671.039 kb on + strand at 3671.039 kb on + strand at 3671.039 kb on + strand at 3671.039 kb on + strand at 3671.039 kb on + strand at 3671.039 kb on + strand at 3671.040 kb on - strand at 3671.040 kb on - strand at 3671.040 kb on - strand at 3671.040 kb on - strand at 3671.040 kb on - strand at 3671.040 kb on - strand at 3671.040 kb on - strand at 3671.040 kb on - strand at 3671.040 kb on - strand at 3671.049 kb on - strand at 3671.088 kb on + strand at 3671.089 kb on - strand at 3671.089 kb on - strand at 3671.090 kb on + strand at 3671.834 kb on + strand at 3671.834 kb on + strand at 3671.875 kb on + strand at 3671.900 kb on + strand at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.105 kb on - strand, within IAI46_17470 at 3672.139 kb on - strand, within IAI46_17470 at 3672.176 kb on + strand, within IAI46_17470 at 3672.191 kb on + strand, within IAI46_17470 at 3672.192 kb on - strand, within IAI46_17470 at 3672.207 kb on - strand, within IAI46_17470 at 3672.441 kb on + strand, within IAI46_17470 at 3672.571 kb on - strand at 3672.576 kb on - strand at 3672.586 kb on + strand at 3672.587 kb on - strand at 3672.587 kb on - strand at 3672.893 kb on + strand at 3672.910 kb on + strand at 3672.911 kb on - strand at 3672.914 kb on - strand at 3672.918 kb on + strand at 3672.918 kb on + strand at 3672.920 kb on + strand at 3672.920 kb on + strand at 3672.921 kb on - strand at 3672.922 kb on + strand at 3672.922 kb on + strand at 3672.923 kb on - strand at 3673.120 kb on - strand, within IAI46_17475 at 3673.173 kb on + strand, within IAI46_17475 at 3673.174 kb on - strand, within IAI46_17475 at 3673.220 kb on - strand, within IAI46_17475 at 3673.315 kb on + strand, within IAI46_17475 at 3673.315 kb on + strand, within IAI46_17475 at 3673.316 kb on - strand, within IAI46_17475 at 3673.316 kb on - strand, within IAI46_17475 at 3673.316 kb on - strand, within IAI46_17475 at 3673.414 kb on + strand, within IAI46_17475 at 3673.415 kb on - strand, within IAI46_17475 at 3673.418 kb on + strand, within IAI46_17475 at 3673.418 kb on + strand, within IAI46_17475 at 3673.474 kb on + strand, within IAI46_17475 at 3673.474 kb on + strand, within IAI46_17475 at 3673.474 kb on + strand, within IAI46_17475 at 3673.475 kb on - strand, within IAI46_17475 at 3673.547 kb on + strand, within IAI46_17475 at 3673.589 kb on + strand, within IAI46_17475 at 3673.623 kb on + strand, within IAI46_17475 at 3673.623 kb on + strand, within IAI46_17475
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,670,973 - +0.7 3,670,973 - +0.1 3,670,973 - +1.2 3,670,979 - +0.7 3,670,997 + -0.6 3,671,037 + -0.4 3,671,037 + +0.2 3,671,037 + +0.3 3,671,037 + +1.0 3,671,037 + -0.8 3,671,037 + +0.4 3,671,037 + -0.4 3,671,037 + +0.3 3,671,037 + +0.3 3,671,038 - +0.8 3,671,039 + +0.7 3,671,039 + +1.0 3,671,039 + +0.4 3,671,039 + -0.9 3,671,039 + +0.2 3,671,039 + +0.4 3,671,039 + +0.6 3,671,039 + -0.2 3,671,039 + +1.1 3,671,040 - +1.5 3,671,040 - -0.1 3,671,040 - +0.2 3,671,040 - -0.5 3,671,040 - +0.3 3,671,040 - -0.9 3,671,040 - -0.0 3,671,040 - -0.2 3,671,040 - +0.5 3,671,049 - +0.4 3,671,088 + +0.4 3,671,089 - +0.2 3,671,089 - -0.1 3,671,090 + +0.0 3,671,834 + +0.2 3,671,834 + +0.2 3,671,875 + -0.5 3,671,900 + -0.8 3,672,105 - IAI46_17470 0.26 +0.1 3,672,105 - IAI46_17470 0.26 +0.7 3,672,105 - IAI46_17470 0.26 +0.4 3,672,105 - IAI46_17470 0.26 +1.0 3,672,105 - IAI46_17470 0.26 -1.0 3,672,105 - IAI46_17470 0.26 +0.5 3,672,139 - IAI46_17470 0.31 +0.8 3,672,176 + IAI46_17470 0.36 -0.4 3,672,191 + IAI46_17470 0.38 -0.1 3,672,192 - IAI46_17470 0.38 +0.4 3,672,207 - IAI46_17470 0.40 -0.2 3,672,441 + IAI46_17470 0.72 +1.2 3,672,571 - +0.5 3,672,576 - +1.1 3,672,586 + +0.4 3,672,587 - +0.5 3,672,587 - -0.6 3,672,893 + +0.3 3,672,910 + +1.2 3,672,911 - -0.1 3,672,914 - -0.8 3,672,918 + +0.4 3,672,918 + +0.0 3,672,920 + -0.7 3,672,920 + -0.4 3,672,921 - -0.2 3,672,922 + +1.3 3,672,922 + -0.6 3,672,923 - +0.1 3,673,120 - IAI46_17475 0.12 +1.1 3,673,173 + IAI46_17475 0.20 +0.8 3,673,174 - IAI46_17475 0.20 +0.0 3,673,220 - IAI46_17475 0.26 -0.5 3,673,315 + IAI46_17475 0.40 -0.2 3,673,315 + IAI46_17475 0.40 +0.3 3,673,316 - IAI46_17475 0.40 +1.1 3,673,316 - IAI46_17475 0.40 +0.4 3,673,316 - IAI46_17475 0.40 +0.8 3,673,414 + IAI46_17475 0.55 +0.6 3,673,415 - IAI46_17475 0.55 -0.8 3,673,418 + IAI46_17475 0.55 +0.4 3,673,418 + IAI46_17475 0.55 +0.6 3,673,474 + IAI46_17475 0.63 +0.2 3,673,474 + IAI46_17475 0.63 -0.1 3,673,474 + IAI46_17475 0.63 +0.1 3,673,475 - IAI46_17475 0.63 +0.0 3,673,547 + IAI46_17475 0.74 -0.3 3,673,589 + IAI46_17475 0.80 +0.5 3,673,623 + IAI46_17475 0.85 -0.0 3,673,623 + IAI46_17475 0.85 +1.3
Or see this region's nucleotide sequence