Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17305 and IAI46_17310 are separated by 345 nucleotides IAI46_17310 and IAI46_17315 are separated by 89 nucleotides
IAI46_17305: IAI46_17305 - bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase, at 3,634,561 to 3,635,136
_17305
IAI46_17310: IAI46_17310 - cyclic di-GMP phosphodiesterase, at 3,635,482 to 3,637,068
_17310
IAI46_17315: IAI46_17315 - ABC transporter substrate-binding protein, at 3,637,158 to 3,638,966
_17315
Position (kb)
3635
3636
3637
3638 Strain fitness (log2 ratio)
-1
0
1
2 at 3634.490 kb on - strand at 3634.556 kb on + strand at 3634.695 kb on + strand, within IAI46_17305 at 3634.696 kb on - strand, within IAI46_17305 at 3634.779 kb on + strand, within IAI46_17305 at 3634.789 kb on + strand, within IAI46_17305 at 3634.862 kb on + strand, within IAI46_17305 at 3634.862 kb on + strand, within IAI46_17305 at 3634.869 kb on - strand, within IAI46_17305 at 3634.912 kb on + strand, within IAI46_17305 at 3635.014 kb on + strand, within IAI46_17305 at 3635.014 kb on + strand, within IAI46_17305 at 3635.014 kb on + strand, within IAI46_17305 at 3635.046 kb on + strand, within IAI46_17305 at 3635.087 kb on - strand at 3635.094 kb on + strand at 3635.095 kb on - strand at 3635.124 kb on + strand at 3635.163 kb on - strand at 3635.176 kb on + strand at 3635.177 kb on - strand at 3635.237 kb on + strand at 3635.237 kb on + strand at 3635.238 kb on - strand at 3635.285 kb on + strand at 3635.286 kb on - strand at 3635.292 kb on - strand at 3635.346 kb on + strand at 3635.346 kb on + strand at 3635.347 kb on - strand at 3635.421 kb on - strand at 3635.422 kb on + strand at 3635.422 kb on + strand at 3635.422 kb on + strand at 3635.422 kb on + strand at 3635.423 kb on - strand at 3635.425 kb on + strand at 3635.426 kb on - strand at 3635.426 kb on - strand at 3635.439 kb on - strand at 3635.457 kb on + strand at 3635.458 kb on - strand at 3635.481 kb on + strand at 3635.587 kb on - strand at 3635.620 kb on + strand at 3635.699 kb on + strand, within IAI46_17310 at 3635.699 kb on + strand, within IAI46_17310 at 3635.700 kb on - strand, within IAI46_17310 at 3635.746 kb on - strand, within IAI46_17310 at 3635.746 kb on - strand, within IAI46_17310 at 3635.746 kb on - strand, within IAI46_17310 at 3635.746 kb on - strand, within IAI46_17310 at 3635.749 kb on + strand, within IAI46_17310 at 3635.784 kb on + strand, within IAI46_17310 at 3635.784 kb on + strand, within IAI46_17310 at 3635.784 kb on + strand, within IAI46_17310 at 3635.784 kb on + strand, within IAI46_17310 at 3635.785 kb on - strand, within IAI46_17310 at 3635.785 kb on - strand, within IAI46_17310 at 3635.857 kb on + strand, within IAI46_17310 at 3636.021 kb on + strand, within IAI46_17310 at 3636.054 kb on + strand, within IAI46_17310 at 3636.054 kb on + strand, within IAI46_17310 at 3636.054 kb on + strand, within IAI46_17310 at 3636.054 kb on + strand, within IAI46_17310 at 3636.054 kb on + strand, within IAI46_17310 at 3636.055 kb on - strand, within IAI46_17310 at 3636.088 kb on - strand, within IAI46_17310 at 3636.088 kb on - strand, within IAI46_17310 at 3636.175 kb on + strand, within IAI46_17310 at 3636.202 kb on - strand, within IAI46_17310 at 3636.230 kb on + strand, within IAI46_17310 at 3636.230 kb on + strand, within IAI46_17310 at 3636.231 kb on - strand, within IAI46_17310 at 3636.231 kb on - strand, within IAI46_17310 at 3636.259 kb on + strand, within IAI46_17310 at 3636.260 kb on - strand, within IAI46_17310 at 3636.260 kb on - strand, within IAI46_17310 at 3636.262 kb on + strand, within IAI46_17310 at 3636.262 kb on + strand, within IAI46_17310 at 3636.476 kb on + strand, within IAI46_17310 at 3636.607 kb on + strand, within IAI46_17310 at 3636.643 kb on - strand, within IAI46_17310 at 3636.643 kb on - strand, within IAI46_17310 at 3636.789 kb on + strand, within IAI46_17310 at 3636.790 kb on - strand, within IAI46_17310 at 3636.980 kb on - strand at 3636.982 kb on + strand at 3636.983 kb on - strand at 3636.983 kb on - strand at 3636.986 kb on - strand at 3637.125 kb on + strand at 3637.126 kb on - strand at 3637.135 kb on + strand at 3637.135 kb on + strand at 3637.236 kb on + strand at 3637.236 kb on + strand at 3637.237 kb on - strand at 3637.237 kb on - strand at 3637.266 kb on + strand at 3637.267 kb on - strand at 3637.293 kb on + strand at 3637.294 kb on - strand at 3637.294 kb on - strand at 3637.298 kb on + strand at 3637.350 kb on + strand, within IAI46_17315 at 3637.355 kb on + strand, within IAI46_17315 at 3637.410 kb on + strand, within IAI46_17315 at 3637.410 kb on + strand, within IAI46_17315 at 3637.411 kb on - strand, within IAI46_17315 at 3637.411 kb on - strand, within IAI46_17315 at 3637.411 kb on - strand, within IAI46_17315 at 3637.424 kb on + strand, within IAI46_17315 at 3637.424 kb on + strand, within IAI46_17315 at 3637.444 kb on + strand, within IAI46_17315 at 3637.505 kb on - strand, within IAI46_17315 at 3637.515 kb on - strand, within IAI46_17315 at 3637.580 kb on + strand, within IAI46_17315 at 3637.623 kb on + strand, within IAI46_17315 at 3637.624 kb on - strand, within IAI46_17315 at 3637.631 kb on + strand, within IAI46_17315 at 3637.631 kb on + strand, within IAI46_17315 at 3637.813 kb on - strand, within IAI46_17315 at 3637.819 kb on + strand, within IAI46_17315 at 3637.828 kb on - strand, within IAI46_17315 at 3637.828 kb on - strand, within IAI46_17315 at 3637.828 kb on - strand, within IAI46_17315 at 3637.829 kb on + strand, within IAI46_17315 at 3637.830 kb on - strand, within IAI46_17315 at 3637.832 kb on + strand, within IAI46_17315 at 3637.832 kb on + strand, within IAI46_17315 at 3637.833 kb on - strand, within IAI46_17315 at 3637.833 kb on - strand, within IAI46_17315 at 3637.833 kb on - strand, within IAI46_17315 at 3637.833 kb on - strand, within IAI46_17315 at 3637.836 kb on + strand, within IAI46_17315 at 3637.837 kb on - strand, within IAI46_17315 at 3637.918 kb on - strand, within IAI46_17315 at 3637.931 kb on + strand, within IAI46_17315 at 3637.952 kb on + strand, within IAI46_17315 at 3637.965 kb on + strand, within IAI46_17315 at 3638.037 kb on + strand, within IAI46_17315 at 3638.037 kb on + strand, within IAI46_17315 at 3638.037 kb on + strand, within IAI46_17315 at 3638.038 kb on - strand, within IAI46_17315 at 3638.038 kb on - strand, within IAI46_17315 at 3638.039 kb on + strand, within IAI46_17315 at 3638.040 kb on - strand, within IAI46_17315 at 3638.040 kb on - strand, within IAI46_17315 at 3638.041 kb on + strand, within IAI46_17315 at 3638.042 kb on - strand, within IAI46_17315
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,634,490 - +0.8 3,634,556 + -0.1 3,634,695 + IAI46_17305 0.23 +0.1 3,634,696 - IAI46_17305 0.23 -0.1 3,634,779 + IAI46_17305 0.38 +0.2 3,634,789 + IAI46_17305 0.40 +0.9 3,634,862 + IAI46_17305 0.52 +0.3 3,634,862 + IAI46_17305 0.52 +0.3 3,634,869 - IAI46_17305 0.53 +1.1 3,634,912 + IAI46_17305 0.61 -0.0 3,635,014 + IAI46_17305 0.79 +0.9 3,635,014 + IAI46_17305 0.79 -0.0 3,635,014 + IAI46_17305 0.79 +1.1 3,635,046 + IAI46_17305 0.84 +1.1 3,635,087 - +0.6 3,635,094 + +0.4 3,635,095 - +0.8 3,635,124 + +0.3 3,635,163 - +0.0 3,635,176 + +0.1 3,635,177 - -0.7 3,635,237 + +0.4 3,635,237 + -0.5 3,635,238 - +0.1 3,635,285 + +0.5 3,635,286 - +0.1 3,635,292 - +0.3 3,635,346 + +0.4 3,635,346 + +0.4 3,635,347 - +0.6 3,635,421 - +0.3 3,635,422 + +0.8 3,635,422 + +1.4 3,635,422 + +1.2 3,635,422 + +0.7 3,635,423 - -0.4 3,635,425 + -1.0 3,635,426 - +1.3 3,635,426 - -0.5 3,635,439 - +0.0 3,635,457 + -0.2 3,635,458 - +0.2 3,635,481 + +0.4 3,635,587 - +0.1 3,635,620 + +0.2 3,635,699 + IAI46_17310 0.14 +1.1 3,635,699 + IAI46_17310 0.14 -0.2 3,635,700 - IAI46_17310 0.14 +0.3 3,635,746 - IAI46_17310 0.17 -0.3 3,635,746 - IAI46_17310 0.17 -0.5 3,635,746 - IAI46_17310 0.17 +0.6 3,635,746 - IAI46_17310 0.17 +1.5 3,635,749 + IAI46_17310 0.17 -1.2 3,635,784 + IAI46_17310 0.19 -0.5 3,635,784 + IAI46_17310 0.19 -0.8 3,635,784 + IAI46_17310 0.19 +0.0 3,635,784 + IAI46_17310 0.19 -0.5 3,635,785 - IAI46_17310 0.19 -0.5 3,635,785 - IAI46_17310 0.19 -0.0 3,635,857 + IAI46_17310 0.24 -0.2 3,636,021 + IAI46_17310 0.34 -1.1 3,636,054 + IAI46_17310 0.36 -0.3 3,636,054 + IAI46_17310 0.36 +0.1 3,636,054 + IAI46_17310 0.36 +0.3 3,636,054 + IAI46_17310 0.36 +0.4 3,636,054 + IAI46_17310 0.36 +1.5 3,636,055 - IAI46_17310 0.36 -1.4 3,636,088 - IAI46_17310 0.38 -1.0 3,636,088 - IAI46_17310 0.38 -1.1 3,636,175 + IAI46_17310 0.44 +0.8 3,636,202 - IAI46_17310 0.45 -0.8 3,636,230 + IAI46_17310 0.47 -0.1 3,636,230 + IAI46_17310 0.47 +0.3 3,636,231 - IAI46_17310 0.47 +0.8 3,636,231 - IAI46_17310 0.47 +1.1 3,636,259 + IAI46_17310 0.49 +0.1 3,636,260 - IAI46_17310 0.49 -0.7 3,636,260 - IAI46_17310 0.49 +0.5 3,636,262 + IAI46_17310 0.49 -0.3 3,636,262 + IAI46_17310 0.49 -1.2 3,636,476 + IAI46_17310 0.63 +0.2 3,636,607 + IAI46_17310 0.71 -0.1 3,636,643 - IAI46_17310 0.73 +0.4 3,636,643 - IAI46_17310 0.73 -0.6 3,636,789 + IAI46_17310 0.82 +0.2 3,636,790 - IAI46_17310 0.82 -0.2 3,636,980 - +0.6 3,636,982 + -0.2 3,636,983 - +1.5 3,636,983 - +2.6 3,636,986 - +0.6 3,637,125 + +2.2 3,637,126 - +0.8 3,637,135 + +1.4 3,637,135 + -0.9 3,637,236 + -0.5 3,637,236 + -0.4 3,637,237 - -0.4 3,637,237 - +0.8 3,637,266 + -0.4 3,637,267 - +1.0 3,637,293 + +1.3 3,637,294 - -0.5 3,637,294 - +0.2 3,637,298 + -0.5 3,637,350 + IAI46_17315 0.11 +0.1 3,637,355 + IAI46_17315 0.11 +0.0 3,637,410 + IAI46_17315 0.14 -0.4 3,637,410 + IAI46_17315 0.14 +0.3 3,637,411 - IAI46_17315 0.14 +0.1 3,637,411 - IAI46_17315 0.14 -0.5 3,637,411 - IAI46_17315 0.14 +1.5 3,637,424 + IAI46_17315 0.15 +0.4 3,637,424 + IAI46_17315 0.15 -0.1 3,637,444 + IAI46_17315 0.16 +0.4 3,637,505 - IAI46_17315 0.19 -0.3 3,637,515 - IAI46_17315 0.20 +0.2 3,637,580 + IAI46_17315 0.23 -0.8 3,637,623 + IAI46_17315 0.26 -0.3 3,637,624 - IAI46_17315 0.26 -0.2 3,637,631 + IAI46_17315 0.26 -0.3 3,637,631 + IAI46_17315 0.26 +0.6 3,637,813 - IAI46_17315 0.36 -0.1 3,637,819 + IAI46_17315 0.37 +1.7 3,637,828 - IAI46_17315 0.37 -0.1 3,637,828 - IAI46_17315 0.37 +0.0 3,637,828 - IAI46_17315 0.37 -0.5 3,637,829 + IAI46_17315 0.37 +1.0 3,637,830 - IAI46_17315 0.37 +1.0 3,637,832 + IAI46_17315 0.37 +0.0 3,637,832 + IAI46_17315 0.37 +0.4 3,637,833 - IAI46_17315 0.37 +0.3 3,637,833 - IAI46_17315 0.37 +0.4 3,637,833 - IAI46_17315 0.37 -0.3 3,637,833 - IAI46_17315 0.37 -0.4 3,637,836 + IAI46_17315 0.37 -0.3 3,637,837 - IAI46_17315 0.38 -1.0 3,637,918 - IAI46_17315 0.42 -0.7 3,637,931 + IAI46_17315 0.43 +0.5 3,637,952 + IAI46_17315 0.44 +0.8 3,637,965 + IAI46_17315 0.45 +0.9 3,638,037 + IAI46_17315 0.49 +0.9 3,638,037 + IAI46_17315 0.49 +1.3 3,638,037 + IAI46_17315 0.49 -0.2 3,638,038 - IAI46_17315 0.49 +0.8 3,638,038 - IAI46_17315 0.49 +1.5 3,638,039 + IAI46_17315 0.49 +0.5 3,638,040 - IAI46_17315 0.49 +0.5 3,638,040 - IAI46_17315 0.49 -0.7 3,638,041 + IAI46_17315 0.49 +1.5 3,638,042 - IAI46_17315 0.49 +2.0
Or see this region's nucleotide sequence