Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16830 and IAI46_16835 are separated by 33 nucleotides IAI46_16835 and IAI46_16840 are separated by 157 nucleotides IAI46_16840 and IAI46_16845 are separated by 87 nucleotides
IAI46_16830: IAI46_16830 - helix-turn-helix transcriptional regulator, at 3,529,386 to 3,529,955
_16830
IAI46_16835: IAI46_16835 - DUF2623 family protein, at 3,529,989 to 3,530,276
_16835
IAI46_16840: IAI46_16840 - nitroreductase family protein, at 3,530,434 to 3,531,021
_16840
IAI46_16845: IAI46_16845 - LysR family transcriptional regulator, at 3,531,109 to 3,531,990
_16845
Position (kb)
3530
3531
3532 Strain fitness (log2 ratio)
-1
0
1 at 3529.511 kb on + strand, within IAI46_16830 at 3529.511 kb on + strand, within IAI46_16830 at 3529.532 kb on + strand, within IAI46_16830 at 3529.634 kb on + strand, within IAI46_16830 at 3529.675 kb on - strand, within IAI46_16830 at 3529.926 kb on + strand at 3529.926 kb on + strand at 3529.946 kb on + strand at 3529.947 kb on - strand at 3529.947 kb on - strand at 3529.985 kb on - strand at 3530.020 kb on + strand, within IAI46_16835 at 3530.086 kb on + strand, within IAI46_16835 at 3530.170 kb on - strand, within IAI46_16835 at 3530.186 kb on - strand, within IAI46_16835 at 3530.278 kb on + strand at 3530.278 kb on + strand at 3530.278 kb on + strand at 3530.345 kb on + strand at 3530.345 kb on + strand at 3530.345 kb on + strand at 3530.369 kb on - strand at 3530.369 kb on - strand at 3530.573 kb on + strand, within IAI46_16840 at 3530.573 kb on + strand, within IAI46_16840 at 3530.574 kb on - strand, within IAI46_16840 at 3530.574 kb on - strand, within IAI46_16840 at 3530.577 kb on + strand, within IAI46_16840 at 3530.819 kb on + strand, within IAI46_16840 at 3530.850 kb on + strand, within IAI46_16840 at 3530.851 kb on - strand, within IAI46_16840 at 3530.851 kb on - strand, within IAI46_16840 at 3530.877 kb on + strand, within IAI46_16840 at 3530.938 kb on - strand, within IAI46_16840 at 3531.064 kb on - strand at 3531.093 kb on + strand at 3531.246 kb on + strand, within IAI46_16845 at 3531.321 kb on - strand, within IAI46_16845 at 3531.335 kb on + strand, within IAI46_16845 at 3531.336 kb on - strand, within IAI46_16845 at 3531.336 kb on - strand, within IAI46_16845 at 3531.558 kb on + strand, within IAI46_16845 at 3531.559 kb on - strand, within IAI46_16845 at 3531.568 kb on + strand, within IAI46_16845 at 3531.627 kb on - strand, within IAI46_16845 at 3531.636 kb on - strand, within IAI46_16845 at 3531.871 kb on + strand, within IAI46_16845 at 3531.871 kb on + strand, within IAI46_16845
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,529,511 + IAI46_16830 0.22 +0.2 3,529,511 + IAI46_16830 0.22 +0.6 3,529,532 + IAI46_16830 0.26 -0.7 3,529,634 + IAI46_16830 0.44 +0.4 3,529,675 - IAI46_16830 0.51 +0.1 3,529,926 + +0.3 3,529,926 + +0.4 3,529,946 + +1.1 3,529,947 - -0.0 3,529,947 - -0.5 3,529,985 - -1.0 3,530,020 + IAI46_16835 0.11 -0.6 3,530,086 + IAI46_16835 0.34 -0.1 3,530,170 - IAI46_16835 0.63 +0.7 3,530,186 - IAI46_16835 0.68 +0.8 3,530,278 + +0.7 3,530,278 + -0.9 3,530,278 + -1.5 3,530,345 + +0.1 3,530,345 + -0.0 3,530,345 + -0.2 3,530,369 - +0.7 3,530,369 - -0.3 3,530,573 + IAI46_16840 0.24 -0.1 3,530,573 + IAI46_16840 0.24 +0.3 3,530,574 - IAI46_16840 0.24 -0.1 3,530,574 - IAI46_16840 0.24 +0.1 3,530,577 + IAI46_16840 0.24 +0.6 3,530,819 + IAI46_16840 0.65 +0.9 3,530,850 + IAI46_16840 0.71 -0.6 3,530,851 - IAI46_16840 0.71 -0.3 3,530,851 - IAI46_16840 0.71 -0.4 3,530,877 + IAI46_16840 0.75 +0.2 3,530,938 - IAI46_16840 0.86 +0.5 3,531,064 - -1.7 3,531,093 + +0.2 3,531,246 + IAI46_16845 0.16 +0.0 3,531,321 - IAI46_16845 0.24 +0.9 3,531,335 + IAI46_16845 0.26 +0.2 3,531,336 - IAI46_16845 0.26 +0.4 3,531,336 - IAI46_16845 0.26 -0.6 3,531,558 + IAI46_16845 0.51 -0.3 3,531,559 - IAI46_16845 0.51 +0.6 3,531,568 + IAI46_16845 0.52 +0.3 3,531,627 - IAI46_16845 0.59 +0.1 3,531,636 - IAI46_16845 0.60 +0.3 3,531,871 + IAI46_16845 0.86 +0.3 3,531,871 + IAI46_16845 0.86 +0.4
Or see this region's nucleotide sequence