Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15480 and IAI46_15485 are separated by 68 nucleotides IAI46_15485 and IAI46_15490 are separated by 57 nucleotides
IAI46_15480: IAI46_15480 - fimbrial protein, at 3,240,266 to 3,240,811
_15480
IAI46_15485: IAI46_15485 - molecular chaperone, at 3,240,880 to 3,241,554
_15485
IAI46_15490: IAI46_15490 - fimbrial biogenesis outer membrane usher protein, at 3,241,612 to 3,244,140
_15490
Position (kb)
3240
3241
3242 Strain fitness (log2 ratio)
-2
-1
0
1 at 3239.984 kb on - strand at 3239.988 kb on - strand at 3240.137 kb on - strand at 3240.259 kb on + strand at 3240.259 kb on + strand at 3240.344 kb on - strand, within IAI46_15480 at 3240.665 kb on + strand, within IAI46_15480 at 3240.665 kb on + strand, within IAI46_15480 at 3240.666 kb on - strand, within IAI46_15480 at 3240.666 kb on - strand, within IAI46_15480 at 3240.737 kb on + strand, within IAI46_15480 at 3240.803 kb on + strand at 3240.804 kb on - strand at 3240.887 kb on - strand at 3240.914 kb on + strand at 3240.914 kb on + strand at 3241.186 kb on + strand, within IAI46_15485 at 3241.187 kb on - strand, within IAI46_15485 at 3241.375 kb on + strand, within IAI46_15485 at 3241.376 kb on - strand, within IAI46_15485 at 3241.429 kb on + strand, within IAI46_15485 at 3241.429 kb on + strand, within IAI46_15485 at 3241.429 kb on + strand, within IAI46_15485 at 3241.430 kb on - strand, within IAI46_15485 at 3241.430 kb on - strand, within IAI46_15485 at 3241.430 kb on - strand, within IAI46_15485 at 3241.817 kb on - strand at 3242.092 kb on + strand, within IAI46_15490 at 3242.093 kb on - strand, within IAI46_15490 at 3242.143 kb on + strand, within IAI46_15490 at 3242.143 kb on + strand, within IAI46_15490 at 3242.299 kb on + strand, within IAI46_15490 at 3242.299 kb on + strand, within IAI46_15490 at 3242.299 kb on + strand, within IAI46_15490 at 3242.299 kb on + strand, within IAI46_15490 at 3242.300 kb on - strand, within IAI46_15490 at 3242.305 kb on + strand, within IAI46_15490 at 3242.449 kb on + strand, within IAI46_15490
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,239,984 - -1.8 3,239,988 - -0.1 3,240,137 - +0.3 3,240,259 + +0.6 3,240,259 + +0.2 3,240,344 - IAI46_15480 0.14 +0.4 3,240,665 + IAI46_15480 0.73 +0.7 3,240,665 + IAI46_15480 0.73 +1.2 3,240,666 - IAI46_15480 0.73 -0.6 3,240,666 - IAI46_15480 0.73 +0.5 3,240,737 + IAI46_15480 0.86 -0.9 3,240,803 + +1.4 3,240,804 - +0.7 3,240,887 - -0.5 3,240,914 + +1.0 3,240,914 + -0.1 3,241,186 + IAI46_15485 0.45 +1.2 3,241,187 - IAI46_15485 0.45 +0.2 3,241,375 + IAI46_15485 0.73 +1.2 3,241,376 - IAI46_15485 0.73 +0.6 3,241,429 + IAI46_15485 0.81 +0.1 3,241,429 + IAI46_15485 0.81 +0.2 3,241,429 + IAI46_15485 0.81 +0.6 3,241,430 - IAI46_15485 0.81 -0.3 3,241,430 - IAI46_15485 0.81 -0.6 3,241,430 - IAI46_15485 0.81 +0.4 3,241,817 - +0.4 3,242,092 + IAI46_15490 0.19 -0.5 3,242,093 - IAI46_15490 0.19 +0.2 3,242,143 + IAI46_15490 0.21 -0.5 3,242,143 + IAI46_15490 0.21 +0.5 3,242,299 + IAI46_15490 0.27 +0.1 3,242,299 + IAI46_15490 0.27 -0.8 3,242,299 + IAI46_15490 0.27 +0.2 3,242,299 + IAI46_15490 0.27 -2.5 3,242,300 - IAI46_15490 0.27 +0.6 3,242,305 + IAI46_15490 0.27 -0.1 3,242,449 + IAI46_15490 0.33 -0.4
Or see this region's nucleotide sequence