Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15380 and IAI46_15385 overlap by 11 nucleotides IAI46_15385 and IAI46_15390 overlap by 4 nucleotides IAI46_15390 and IAI46_15395 are separated by 2 nucleotides
IAI46_15380: IAI46_15380 - ATP-binding cassette domain-containing protein, at 3,220,271 to 3,221,239
_15380
IAI46_15385: IAI46_15385 - ABC transporter ATP-binding protein, at 3,221,229 to 3,222,215
_15385
IAI46_15390: IAI46_15390 - ABC transporter permease, at 3,222,212 to 3,223,162
_15390
IAI46_15395: IAI46_15395 - ABC transporter permease, at 3,223,165 to 3,224,121
_15395
Position (kb)
3222
3223
3224 Strain fitness (log2 ratio)
-1
0
1
2 at 3221.213 kb on + strand at 3221.213 kb on + strand at 3221.214 kb on - strand at 3221.294 kb on - strand at 3221.405 kb on - strand, within IAI46_15385 at 3221.462 kb on - strand, within IAI46_15385 at 3221.514 kb on - strand, within IAI46_15385 at 3221.594 kb on + strand, within IAI46_15385 at 3221.595 kb on - strand, within IAI46_15385 at 3221.663 kb on + strand, within IAI46_15385 at 3222.414 kb on + strand, within IAI46_15390 at 3222.415 kb on - strand, within IAI46_15390 at 3222.415 kb on - strand, within IAI46_15390 at 3222.511 kb on + strand, within IAI46_15390 at 3222.646 kb on - strand, within IAI46_15390 at 3222.854 kb on - strand, within IAI46_15390 at 3222.877 kb on + strand, within IAI46_15390 at 3222.879 kb on + strand, within IAI46_15390 at 3222.940 kb on + strand, within IAI46_15390 at 3223.091 kb on + strand at 3223.091 kb on + strand at 3223.091 kb on + strand at 3223.162 kb on + strand at 3223.162 kb on + strand at 3223.166 kb on + strand at 3223.167 kb on - strand at 3223.167 kb on - strand at 3223.167 kb on - strand at 3223.193 kb on + strand at 3223.194 kb on - strand at 3223.475 kb on + strand, within IAI46_15395 at 3223.476 kb on - strand, within IAI46_15395 at 3223.476 kb on - strand, within IAI46_15395 at 3223.847 kb on + strand, within IAI46_15395 at 3223.864 kb on - strand, within IAI46_15395 at 3223.880 kb on + strand, within IAI46_15395 at 3223.964 kb on + strand, within IAI46_15395 at 3223.964 kb on + strand, within IAI46_15395
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,221,213 + +0.2 3,221,213 + -0.4 3,221,214 - -0.7 3,221,294 - +0.4 3,221,405 - IAI46_15385 0.18 +0.5 3,221,462 - IAI46_15385 0.24 -0.3 3,221,514 - IAI46_15385 0.29 -0.5 3,221,594 + IAI46_15385 0.37 +1.0 3,221,595 - IAI46_15385 0.37 +0.1 3,221,663 + IAI46_15385 0.44 -0.4 3,222,414 + IAI46_15390 0.21 -0.6 3,222,415 - IAI46_15390 0.21 -1.2 3,222,415 - IAI46_15390 0.21 +0.1 3,222,511 + IAI46_15390 0.31 -0.0 3,222,646 - IAI46_15390 0.46 -0.9 3,222,854 - IAI46_15390 0.68 +0.3 3,222,877 + IAI46_15390 0.70 +0.1 3,222,879 + IAI46_15390 0.70 +0.5 3,222,940 + IAI46_15390 0.77 +1.0 3,223,091 + +0.1 3,223,091 + -0.5 3,223,091 + -0.4 3,223,162 + -0.9 3,223,162 + +0.9 3,223,166 + +1.7 3,223,167 - +0.6 3,223,167 - +1.8 3,223,167 - -0.7 3,223,193 + -0.6 3,223,194 - +1.4 3,223,475 + IAI46_15395 0.32 -0.0 3,223,476 - IAI46_15395 0.32 -1.4 3,223,476 - IAI46_15395 0.32 -0.2 3,223,847 + IAI46_15395 0.71 +0.6 3,223,864 - IAI46_15395 0.73 +0.6 3,223,880 + IAI46_15395 0.75 +0.9 3,223,964 + IAI46_15395 0.83 +0.8 3,223,964 + IAI46_15395 0.83 +0.2
Or see this region's nucleotide sequence