Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14930 and IAI46_14935 are separated by 228 nucleotides IAI46_14935 and IAI46_14940 are separated by 130 nucleotides IAI46_14940 and IAI46_14945 are separated by 197 nucleotides IAI46_14945 and IAI46_14950 are separated by 9 nucleotides
IAI46_14930: IAI46_14930 - peptidoglycan-binding protein LysM, at 3,154,677 to 3,155,123
_14930
IAI46_14935: IAI46_14935 - YebW family protein, at 3,155,352 to 3,155,543
_14935
IAI46_14940: IAI46_14940 - hypothetical protein, at 3,155,674 to 3,155,898
_14940
IAI46_14945: IAI46_14945 - hypothetical protein, at 3,156,096 to 3,156,875
_14945
IAI46_14950: IAI46_14950 - SGNH/GDSL hydrolase family protein, at 3,156,885 to 3,158,717
_14950
Position (kb)
3155
3156 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3154.678 kb on + strand at 3154.761 kb on - strand, within IAI46_14930 at 3154.761 kb on - strand, within IAI46_14930 at 3154.763 kb on - strand, within IAI46_14930 at 3154.781 kb on - strand, within IAI46_14930 at 3154.781 kb on - strand, within IAI46_14930 at 3154.863 kb on + strand, within IAI46_14930 at 3155.123 kb on + strand at 3155.169 kb on - strand at 3155.172 kb on - strand at 3155.178 kb on - strand at 3155.213 kb on + strand at 3155.213 kb on + strand at 3155.214 kb on - strand at 3155.217 kb on - strand at 3155.217 kb on - strand at 3155.230 kb on - strand at 3155.269 kb on + strand at 3155.313 kb on - strand at 3155.341 kb on + strand at 3155.342 kb on - strand at 3155.343 kb on + strand at 3155.343 kb on + strand at 3155.343 kb on + strand at 3155.380 kb on - strand, within IAI46_14935 at 3155.447 kb on + strand, within IAI46_14935 at 3155.560 kb on + strand at 3155.562 kb on + strand at 3155.622 kb on + strand at 3155.623 kb on - strand at 3155.631 kb on - strand at 3155.631 kb on - strand at 3155.638 kb on + strand at 3155.790 kb on + strand, within IAI46_14940 at 3155.793 kb on + strand, within IAI46_14940 at 3155.850 kb on + strand, within IAI46_14940 at 3155.850 kb on + strand, within IAI46_14940 at 3155.851 kb on - strand, within IAI46_14940 at 3156.051 kb on + strand at 3156.082 kb on - strand at 3156.098 kb on - strand at 3156.108 kb on - strand at 3156.127 kb on + strand at 3156.127 kb on + strand at 3156.128 kb on - strand at 3156.136 kb on - strand at 3156.184 kb on + strand, within IAI46_14945 at 3156.185 kb on - strand, within IAI46_14945 at 3156.189 kb on - strand, within IAI46_14945 at 3156.199 kb on + strand, within IAI46_14945 at 3156.199 kb on + strand, within IAI46_14945 at 3156.204 kb on - strand, within IAI46_14945 at 3156.255 kb on + strand, within IAI46_14945 at 3156.256 kb on - strand, within IAI46_14945 at 3156.260 kb on + strand, within IAI46_14945 at 3156.261 kb on - strand, within IAI46_14945 at 3156.291 kb on + strand, within IAI46_14945 at 3156.580 kb on - strand, within IAI46_14945 at 3156.584 kb on + strand, within IAI46_14945 at 3156.584 kb on + strand, within IAI46_14945 at 3156.623 kb on + strand, within IAI46_14945 at 3156.624 kb on - strand, within IAI46_14945 at 3156.627 kb on + strand, within IAI46_14945 at 3156.628 kb on - strand, within IAI46_14945 at 3156.628 kb on - strand, within IAI46_14945 at 3156.652 kb on + strand, within IAI46_14945 at 3156.756 kb on + strand, within IAI46_14945 at 3156.798 kb on + strand at 3156.813 kb on - strand at 3156.815 kb on + strand at 3156.816 kb on - strand at 3156.846 kb on - strand at 3156.875 kb on + strand at 3156.877 kb on + strand at 3156.877 kb on + strand at 3156.878 kb on - strand at 3156.878 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,154,678 + +0.3 3,154,761 - IAI46_14930 0.19 -2.4 3,154,761 - IAI46_14930 0.19 +1.3 3,154,763 - IAI46_14930 0.19 -0.3 3,154,781 - IAI46_14930 0.23 +0.5 3,154,781 - IAI46_14930 0.23 +0.4 3,154,863 + IAI46_14930 0.42 +2.2 3,155,123 + -1.9 3,155,169 - -0.0 3,155,172 - +0.2 3,155,178 - +0.6 3,155,213 + +0.2 3,155,213 + -0.2 3,155,214 - +0.3 3,155,217 - +1.4 3,155,217 - +0.9 3,155,230 - +1.1 3,155,269 + +0.3 3,155,313 - +0.6 3,155,341 + -0.3 3,155,342 - -0.4 3,155,343 + +0.4 3,155,343 + +1.3 3,155,343 + +1.0 3,155,380 - IAI46_14935 0.15 -1.5 3,155,447 + IAI46_14935 0.49 -0.6 3,155,560 + +0.5 3,155,562 + +0.3 3,155,622 + +0.7 3,155,623 - +0.9 3,155,631 - +0.3 3,155,631 - -1.0 3,155,638 + -0.2 3,155,790 + IAI46_14940 0.52 +0.8 3,155,793 + IAI46_14940 0.53 +0.0 3,155,850 + IAI46_14940 0.78 +0.2 3,155,850 + IAI46_14940 0.78 +0.0 3,155,851 - IAI46_14940 0.79 +0.8 3,156,051 + -1.4 3,156,082 - +0.2 3,156,098 - -0.2 3,156,108 - +0.1 3,156,127 + -0.0 3,156,127 + +0.3 3,156,128 - +0.1 3,156,136 - +1.1 3,156,184 + IAI46_14945 0.11 -0.6 3,156,185 - IAI46_14945 0.11 +0.0 3,156,189 - IAI46_14945 0.12 +0.9 3,156,199 + IAI46_14945 0.13 +0.7 3,156,199 + IAI46_14945 0.13 +0.6 3,156,204 - IAI46_14945 0.14 -0.5 3,156,255 + IAI46_14945 0.20 +0.9 3,156,256 - IAI46_14945 0.21 +0.4 3,156,260 + IAI46_14945 0.21 -0.0 3,156,261 - IAI46_14945 0.21 -0.6 3,156,291 + IAI46_14945 0.25 +0.3 3,156,580 - IAI46_14945 0.62 +0.3 3,156,584 + IAI46_14945 0.63 +0.9 3,156,584 + IAI46_14945 0.63 +1.2 3,156,623 + IAI46_14945 0.68 +0.6 3,156,624 - IAI46_14945 0.68 +0.6 3,156,627 + IAI46_14945 0.68 +1.4 3,156,628 - IAI46_14945 0.68 +0.8 3,156,628 - IAI46_14945 0.68 -0.1 3,156,652 + IAI46_14945 0.71 +0.6 3,156,756 + IAI46_14945 0.85 +1.2 3,156,798 + +1.2 3,156,813 - -1.0 3,156,815 + +0.9 3,156,816 - +0.4 3,156,846 - +0.9 3,156,875 + +0.2 3,156,877 + +1.6 3,156,877 + +0.1 3,156,878 - +0.7 3,156,878 - +0.5
Or see this region's nucleotide sequence