Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14890 and IAI46_14895 are separated by 163 nucleotides IAI46_14895 and IAI46_14900 are separated by 42 nucleotides IAI46_14900 and IAI46_14905 are separated by 200 nucleotides IAI46_14905 and IAI46_14910 are separated by 457 nucleotides IAI46_14910 and IAI46_14915 are separated by 29 nucleotides
IAI46_14890: IAI46_14890 - PhoP/PhoQ regulator MgrB, at 3,150,111 to 3,150,269
_14890
IAI46_14895: IAI46_14895 - hypothetical protein, at 3,150,433 to 3,150,666
_14895
IAI46_14900: IAI46_14900 - DUF2766 domain-containing protein, at 3,150,709 to 3,150,948
_14900
IAI46_14905: IAI46_14905 - hypothetical protein, at 3,151,149 to 3,151,361
_14905
IAI46_14910: IAI46_14910 - helix-turn-helix domain-containing protein, at 3,151,819 to 3,152,205
_14910
IAI46_14915: IAI46_14915 - DUF1304 domain-containing protein, at 3,152,235 to 3,152,588
_14915
Position (kb)
3151
3152 Strain fitness (log2 ratio)
-1
0
1 at 3150.176 kb on - strand, within IAI46_14890 at 3150.176 kb on - strand, within IAI46_14890 at 3150.179 kb on + strand, within IAI46_14890 at 3150.180 kb on - strand, within IAI46_14890 at 3150.229 kb on - strand, within IAI46_14890 at 3150.298 kb on + strand at 3150.312 kb on + strand at 3150.313 kb on - strand at 3150.398 kb on + strand at 3150.399 kb on - strand at 3150.400 kb on + strand at 3150.419 kb on - strand at 3150.431 kb on + strand at 3150.431 kb on + strand at 3150.438 kb on + strand at 3150.558 kb on + strand, within IAI46_14895 at 3150.948 kb on + strand at 3150.949 kb on - strand at 3150.952 kb on + strand at 3150.952 kb on + strand at 3150.986 kb on - strand at 3151.183 kb on + strand, within IAI46_14905 at 3151.184 kb on - strand, within IAI46_14905 at 3151.184 kb on - strand, within IAI46_14905 at 3151.342 kb on + strand at 3151.359 kb on + strand at 3151.493 kb on - strand at 3151.781 kb on - strand at 3151.782 kb on + strand at 3151.793 kb on + strand at 3151.797 kb on + strand at 3151.797 kb on + strand at 3151.797 kb on + strand at 3151.797 kb on + strand at 3151.798 kb on - strand at 3151.798 kb on - strand at 3151.824 kb on - strand at 3151.860 kb on + strand, within IAI46_14910 at 3151.915 kb on + strand, within IAI46_14910 at 3151.925 kb on - strand, within IAI46_14910 at 3151.984 kb on + strand, within IAI46_14910 at 3152.096 kb on - strand, within IAI46_14910 at 3152.096 kb on - strand, within IAI46_14910 at 3152.097 kb on + strand, within IAI46_14910 at 3152.098 kb on - strand, within IAI46_14910 at 3152.262 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 3,150,176 - IAI46_14890 0.41 -0.5 3,150,176 - IAI46_14890 0.41 +0.5 3,150,179 + IAI46_14890 0.43 +0.9 3,150,180 - IAI46_14890 0.43 -1.3 3,150,229 - IAI46_14890 0.74 +0.2 3,150,298 + +0.6 3,150,312 + -0.1 3,150,313 - +0.3 3,150,398 + +0.1 3,150,399 - -0.5 3,150,400 + +0.7 3,150,419 - +0.2 3,150,431 + +0.5 3,150,431 + -0.6 3,150,438 + +0.4 3,150,558 + IAI46_14895 0.53 -0.2 3,150,948 + -1.0 3,150,949 - +1.2 3,150,952 + -0.4 3,150,952 + +0.8 3,150,986 - -0.5 3,151,183 + IAI46_14905 0.16 -0.1 3,151,184 - IAI46_14905 0.16 +0.9 3,151,184 - IAI46_14905 0.16 -0.4 3,151,342 + +1.2 3,151,359 + +0.1 3,151,493 - +0.3 3,151,781 - -0.8 3,151,782 + +0.2 3,151,793 + +0.3 3,151,797 + -0.1 3,151,797 + -0.4 3,151,797 + +0.3 3,151,797 + +1.6 3,151,798 - +0.5 3,151,798 - +0.6 3,151,824 - +0.3 3,151,860 + IAI46_14910 0.11 +0.5 3,151,915 + IAI46_14910 0.25 +0.6 3,151,925 - IAI46_14910 0.27 +0.4 3,151,984 + IAI46_14910 0.43 +0.5 3,152,096 - IAI46_14910 0.72 -0.6 3,152,096 - IAI46_14910 0.72 +0.4 3,152,097 + IAI46_14910 0.72 +0.2 3,152,098 - IAI46_14910 0.72 +0.2 3,152,262 - -0.4
Or see this region's nucleotide sequence