Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13445 and IAI46_13450 are separated by 158 nucleotides IAI46_13450 and IAI46_13455 are separated by 207 nucleotides IAI46_13455 and IAI46_13460 are separated by 5 nucleotides
IAI46_13445: IAI46_13445 - oligopeptide ABC transporter substrate-binding protein OppA, at 2,872,376 to 2,874,010
_13445
IAI46_13450: IAI46_13450 - hypothetical protein, at 2,874,169 to 2,874,519
_13450
IAI46_13455: IAI46_13455 - murein tripeptide amidase MpaA, at 2,874,727 to 2,875,434
_13455
IAI46_13460: IAI46_13460 - L-Ala-D/L-Glu epimerase, at 2,875,440 to 2,876,411
_13460
Position (kb)
2874
2875 Strain fitness (log2 ratio)
-1
0
1 at 2873.221 kb on - strand, within IAI46_13445 at 2873.256 kb on - strand, within IAI46_13445 at 2873.256 kb on - strand, within IAI46_13445 at 2873.299 kb on - strand, within IAI46_13445 at 2873.354 kb on - strand, within IAI46_13445 at 2873.354 kb on - strand, within IAI46_13445 at 2873.355 kb on + strand, within IAI46_13445 at 2873.355 kb on + strand, within IAI46_13445 at 2873.356 kb on - strand, within IAI46_13445 at 2873.466 kb on + strand, within IAI46_13445 at 2873.467 kb on - strand, within IAI46_13445 at 2873.479 kb on + strand, within IAI46_13445 at 2873.502 kb on + strand, within IAI46_13445 at 2873.503 kb on - strand, within IAI46_13445 at 2873.644 kb on - strand, within IAI46_13445 at 2874.049 kb on + strand at 2874.050 kb on - strand at 2874.052 kb on - strand at 2874.073 kb on - strand at 2874.095 kb on + strand at 2874.171 kb on - strand at 2874.234 kb on + strand, within IAI46_13450 at 2874.311 kb on + strand, within IAI46_13450 at 2874.312 kb on - strand, within IAI46_13450 at 2874.317 kb on + strand, within IAI46_13450 at 2874.317 kb on + strand, within IAI46_13450 at 2874.318 kb on - strand, within IAI46_13450 at 2874.318 kb on - strand, within IAI46_13450 at 2874.318 kb on - strand, within IAI46_13450 at 2874.327 kb on - strand, within IAI46_13450 at 2874.491 kb on + strand at 2874.491 kb on + strand at 2874.491 kb on + strand at 2874.492 kb on - strand at 2874.492 kb on - strand at 2874.492 kb on - strand at 2874.495 kb on + strand at 2874.502 kb on - strand at 2874.523 kb on - strand at 2874.523 kb on - strand at 2874.559 kb on + strand at 2874.560 kb on - strand at 2874.563 kb on - strand at 2874.564 kb on + strand at 2874.565 kb on - strand at 2874.565 kb on - strand at 2874.593 kb on + strand at 2874.594 kb on - strand at 2874.625 kb on - strand at 2874.645 kb on + strand at 2874.645 kb on + strand at 2874.646 kb on - strand at 2874.646 kb on - strand at 2874.675 kb on + strand at 2875.393 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,873,221 - IAI46_13445 0.52 +1.0 2,873,256 - IAI46_13445 0.54 +0.1 2,873,256 - IAI46_13445 0.54 +1.7 2,873,299 - IAI46_13445 0.56 -0.9 2,873,354 - IAI46_13445 0.60 -0.2 2,873,354 - IAI46_13445 0.60 -0.0 2,873,355 + IAI46_13445 0.60 -1.2 2,873,355 + IAI46_13445 0.60 -0.0 2,873,356 - IAI46_13445 0.60 +1.0 2,873,466 + IAI46_13445 0.67 +1.1 2,873,467 - IAI46_13445 0.67 +0.9 2,873,479 + IAI46_13445 0.67 -0.2 2,873,502 + IAI46_13445 0.69 +0.3 2,873,503 - IAI46_13445 0.69 +0.0 2,873,644 - IAI46_13445 0.78 +0.6 2,874,049 + -0.0 2,874,050 - -0.2 2,874,052 - -1.0 2,874,073 - +0.9 2,874,095 + +0.2 2,874,171 - +0.4 2,874,234 + IAI46_13450 0.19 +0.7 2,874,311 + IAI46_13450 0.40 +0.1 2,874,312 - IAI46_13450 0.41 +0.5 2,874,317 + IAI46_13450 0.42 +1.1 2,874,317 + IAI46_13450 0.42 +0.3 2,874,318 - IAI46_13450 0.42 +0.7 2,874,318 - IAI46_13450 0.42 +0.1 2,874,318 - IAI46_13450 0.42 -0.3 2,874,327 - IAI46_13450 0.45 +0.3 2,874,491 + -0.9 2,874,491 + +0.6 2,874,491 + +0.1 2,874,492 - +0.2 2,874,492 - +1.1 2,874,492 - +1.1 2,874,495 + -0.1 2,874,502 - -0.9 2,874,523 - -0.4 2,874,523 - -0.7 2,874,559 + +0.0 2,874,560 - -1.6 2,874,563 - +0.7 2,874,564 + +0.4 2,874,565 - +0.4 2,874,565 - -0.1 2,874,593 + -0.4 2,874,594 - -0.3 2,874,625 - +1.1 2,874,645 + +0.3 2,874,645 + +0.2 2,874,646 - -0.1 2,874,646 - -0.1 2,874,675 + -0.1 2,875,393 + -0.1
Or see this region's nucleotide sequence