Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13330 and IAI46_13335 are separated by 269 nucleotides IAI46_13335 and IAI46_13340 are separated by 128 nucleotides IAI46_13340 and IAI46_13345 are separated by 8 nucleotides IAI46_13345 and IAI46_13350 overlap by 4 nucleotides
IAI46_13330: IAI46_13330 - ATP-dependent RNA helicase HrpA, at 2,842,498 to 2,846,385
_13330
IAI46_13335: IAI46_13335 - FMN-dependent NADH-azoreductase, at 2,846,655 to 2,847,260
_13335
IAI46_13340: IAI46_13340 - YdbL family protein, at 2,847,389 to 2,847,712
_13340
IAI46_13345: IAI46_13345 - YnbE family lipoprotein, at 2,847,721 to 2,847,918
_13345
IAI46_13350: IAI46_13350 - YdbH family protein, at 2,847,915 to 2,850,527
_13350
Position (kb)
2846
2847
2848 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2845.659 kb on + strand, within IAI46_13330 at 2845.659 kb on + strand, within IAI46_13330 at 2845.827 kb on - strand, within IAI46_13330 at 2845.929 kb on + strand, within IAI46_13330 at 2846.237 kb on - strand at 2846.482 kb on + strand at 2846.482 kb on + strand at 2846.500 kb on + strand at 2846.514 kb on - strand at 2846.567 kb on + strand at 2846.590 kb on + strand at 2846.591 kb on - strand at 2846.597 kb on + strand at 2846.642 kb on + strand at 2846.643 kb on - strand at 2846.666 kb on - strand at 2846.675 kb on + strand at 2846.943 kb on + strand, within IAI46_13335 at 2846.943 kb on + strand, within IAI46_13335 at 2846.944 kb on - strand, within IAI46_13335 at 2846.945 kb on + strand, within IAI46_13335 at 2846.976 kb on + strand, within IAI46_13335 at 2847.016 kb on - strand, within IAI46_13335 at 2847.051 kb on - strand, within IAI46_13335 at 2847.331 kb on + strand at 2847.331 kb on + strand at 2847.353 kb on + strand at 2847.353 kb on + strand at 2847.356 kb on - strand at 2847.416 kb on - strand at 2847.426 kb on + strand, within IAI46_13340 at 2847.427 kb on - strand, within IAI46_13340 at 2847.493 kb on + strand, within IAI46_13340 at 2847.520 kb on - strand, within IAI46_13340 at 2847.723 kb on - strand at 2847.807 kb on + strand, within IAI46_13345 at 2847.807 kb on + strand, within IAI46_13345 at 2847.808 kb on - strand, within IAI46_13345 at 2848.021 kb on + strand at 2848.021 kb on + strand at 2848.142 kb on + strand at 2848.142 kb on + strand at 2848.142 kb on + strand at 2848.145 kb on - strand at 2848.182 kb on - strand, within IAI46_13350 at 2848.182 kb on - strand, within IAI46_13350 at 2848.184 kb on + strand, within IAI46_13350 at 2848.184 kb on + strand, within IAI46_13350 at 2848.191 kb on + strand, within IAI46_13350 at 2848.192 kb on - strand, within IAI46_13350
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,845,659 + IAI46_13330 0.81 -0.1 2,845,659 + IAI46_13330 0.81 +0.2 2,845,827 - IAI46_13330 0.86 +0.4 2,845,929 + IAI46_13330 0.88 -0.1 2,846,237 - -0.2 2,846,482 + +1.2 2,846,482 + -0.4 2,846,500 + +0.4 2,846,514 - -0.8 2,846,567 + +0.3 2,846,590 + +0.4 2,846,591 - +0.5 2,846,597 + -0.3 2,846,642 + +0.5 2,846,643 - +0.3 2,846,666 - -0.4 2,846,675 + +0.0 2,846,943 + IAI46_13335 0.48 +1.2 2,846,943 + IAI46_13335 0.48 -0.1 2,846,944 - IAI46_13335 0.48 +0.4 2,846,945 + IAI46_13335 0.48 +0.1 2,846,976 + IAI46_13335 0.53 -2.4 2,847,016 - IAI46_13335 0.60 +0.7 2,847,051 - IAI46_13335 0.65 +1.0 2,847,331 + +0.2 2,847,331 + +0.6 2,847,353 + +2.0 2,847,353 + +0.8 2,847,356 - -0.2 2,847,416 - -0.2 2,847,426 + IAI46_13340 0.11 -0.2 2,847,427 - IAI46_13340 0.12 +0.8 2,847,493 + IAI46_13340 0.32 +1.9 2,847,520 - IAI46_13340 0.40 +1.4 2,847,723 - -0.6 2,847,807 + IAI46_13345 0.43 +1.4 2,847,807 + IAI46_13345 0.43 +1.1 2,847,808 - IAI46_13345 0.44 +1.6 2,848,021 + +1.2 2,848,021 + +1.5 2,848,142 + +0.7 2,848,142 + +0.5 2,848,142 + +1.1 2,848,145 - +0.8 2,848,182 - IAI46_13350 0.10 +0.9 2,848,182 - IAI46_13350 0.10 +0.4 2,848,184 + IAI46_13350 0.10 +0.4 2,848,184 + IAI46_13350 0.10 +1.4 2,848,191 + IAI46_13350 0.11 +0.8 2,848,192 - IAI46_13350 0.11 +1.6
Or see this region's nucleotide sequence