Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12935 and IAI46_12940 are separated by 32 nucleotides IAI46_12940 and IAI46_12945 overlap by 4 nucleotides
IAI46_12935: IAI46_12935 - alpha-glucosidase, at 2,758,962 to 2,760,323
_12935
IAI46_12940: IAI46_12940 - carbohydrate ABC transporter permease, at 2,760,356 to 2,761,201
_12940
IAI46_12945: IAI46_12945 - sugar ABC transporter permease, at 2,761,198 to 2,762,193
_12945
Position (kb)
2760
2761
2762 Strain fitness (log2 ratio)
-2
-1
0
1 at 2759.378 kb on - strand, within IAI46_12935 at 2759.386 kb on + strand, within IAI46_12935 at 2759.436 kb on - strand, within IAI46_12935 at 2759.586 kb on - strand, within IAI46_12935 at 2759.602 kb on + strand, within IAI46_12935 at 2759.641 kb on + strand, within IAI46_12935 at 2759.642 kb on - strand, within IAI46_12935 at 2759.642 kb on - strand, within IAI46_12935 at 2759.642 kb on - strand, within IAI46_12935 at 2759.696 kb on - strand, within IAI46_12935 at 2759.696 kb on - strand, within IAI46_12935 at 2759.786 kb on - strand, within IAI46_12935 at 2759.951 kb on + strand, within IAI46_12935 at 2759.999 kb on - strand, within IAI46_12935 at 2760.080 kb on + strand, within IAI46_12935 at 2760.622 kb on + strand, within IAI46_12940 at 2760.757 kb on + strand, within IAI46_12940 at 2760.759 kb on + strand, within IAI46_12940 at 2760.789 kb on + strand, within IAI46_12940 at 2760.880 kb on - strand, within IAI46_12940 at 2761.108 kb on - strand, within IAI46_12940 at 2761.174 kb on - strand at 2761.237 kb on - strand at 2761.270 kb on - strand at 2761.382 kb on + strand, within IAI46_12945 at 2761.450 kb on - strand, within IAI46_12945 at 2761.517 kb on + strand, within IAI46_12945 at 2761.692 kb on - strand, within IAI46_12945 at 2761.943 kb on + strand, within IAI46_12945 at 2761.944 kb on - strand, within IAI46_12945 at 2762.007 kb on - strand, within IAI46_12945
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,759,378 - IAI46_12935 0.31 +0.8 2,759,386 + IAI46_12935 0.31 -0.0 2,759,436 - IAI46_12935 0.35 -0.3 2,759,586 - IAI46_12935 0.46 +1.2 2,759,602 + IAI46_12935 0.47 -0.5 2,759,641 + IAI46_12935 0.50 -2.2 2,759,642 - IAI46_12935 0.50 +0.8 2,759,642 - IAI46_12935 0.50 -1.2 2,759,642 - IAI46_12935 0.50 +1.4 2,759,696 - IAI46_12935 0.54 +1.1 2,759,696 - IAI46_12935 0.54 -1.1 2,759,786 - IAI46_12935 0.60 -0.6 2,759,951 + IAI46_12935 0.73 +0.2 2,759,999 - IAI46_12935 0.76 -1.1 2,760,080 + IAI46_12935 0.82 -0.3 2,760,622 + IAI46_12940 0.31 +0.7 2,760,757 + IAI46_12940 0.47 -0.5 2,760,759 + IAI46_12940 0.48 -0.4 2,760,789 + IAI46_12940 0.51 +0.5 2,760,880 - IAI46_12940 0.62 -0.4 2,761,108 - IAI46_12940 0.89 +1.1 2,761,174 - -0.4 2,761,237 - +0.7 2,761,270 - -0.2 2,761,382 + IAI46_12945 0.18 -0.5 2,761,450 - IAI46_12945 0.25 -0.2 2,761,517 + IAI46_12945 0.32 +0.2 2,761,692 - IAI46_12945 0.50 -0.1 2,761,943 + IAI46_12945 0.75 -0.9 2,761,944 - IAI46_12945 0.75 +0.0 2,762,007 - IAI46_12945 0.81 -0.2
Or see this region's nucleotide sequence