Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12840 and IAI46_12845 are separated by 1 nucleotides IAI46_12845 and IAI46_12850 are separated by 9 nucleotides IAI46_12850 and IAI46_12855 are separated by 355 nucleotides
IAI46_12840: IAI46_12840 - hydroxyacid dehydrogenase, at 2,735,568 to 2,736,548
_12840
IAI46_12845: IAI46_12845 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, at 2,736,550 to 2,737,365
_12845
IAI46_12850: IAI46_12850 - NAD-dependent succinate-semialdehyde dehydrogenase, at 2,737,375 to 2,738,808
_12850
IAI46_12855: IAI46_12855 - MurR/RpiR family transcriptional regulator, at 2,739,164 to 2,740,105
_12855
Position (kb)
2737
2738
2739 Strain fitness (log2 ratio)
-1
0
1
2 at 2736.430 kb on + strand, within IAI46_12840 at 2736.431 kb on - strand, within IAI46_12840 at 2736.496 kb on - strand at 2736.538 kb on - strand at 2736.650 kb on - strand, within IAI46_12845 at 2736.772 kb on + strand, within IAI46_12845 at 2736.972 kb on - strand, within IAI46_12845 at 2737.169 kb on - strand, within IAI46_12845 at 2737.197 kb on + strand, within IAI46_12845 at 2737.198 kb on - strand, within IAI46_12845 at 2737.240 kb on + strand, within IAI46_12845 at 2737.376 kb on + strand at 2737.410 kb on - strand at 2737.420 kb on - strand at 2737.497 kb on - strand at 2737.497 kb on - strand at 2737.574 kb on + strand, within IAI46_12850 at 2737.728 kb on - strand, within IAI46_12850 at 2738.042 kb on - strand, within IAI46_12850 at 2738.177 kb on + strand, within IAI46_12850 at 2738.178 kb on - strand, within IAI46_12850 at 2738.272 kb on + strand, within IAI46_12850 at 2738.272 kb on + strand, within IAI46_12850 at 2738.273 kb on - strand, within IAI46_12850 at 2738.301 kb on + strand, within IAI46_12850 at 2738.479 kb on - strand, within IAI46_12850 at 2738.479 kb on - strand, within IAI46_12850 at 2738.680 kb on - strand at 2738.784 kb on + strand at 2738.785 kb on - strand at 2738.805 kb on - strand at 2739.294 kb on - strand, within IAI46_12855 at 2739.314 kb on - strand, within IAI46_12855 at 2739.403 kb on + strand, within IAI46_12855 at 2739.404 kb on - strand, within IAI46_12855 at 2739.465 kb on - strand, within IAI46_12855 at 2739.577 kb on - strand, within IAI46_12855 at 2739.644 kb on + strand, within IAI46_12855 at 2739.646 kb on + strand, within IAI46_12855 at 2739.646 kb on + strand, within IAI46_12855 at 2739.769 kb on + strand, within IAI46_12855 at 2739.770 kb on - strand, within IAI46_12855 at 2739.790 kb on + strand, within IAI46_12855 at 2739.791 kb on - strand, within IAI46_12855
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,736,430 + IAI46_12840 0.88 +0.9 2,736,431 - IAI46_12840 0.88 +0.5 2,736,496 - +0.3 2,736,538 - +1.0 2,736,650 - IAI46_12845 0.12 +0.4 2,736,772 + IAI46_12845 0.27 +0.7 2,736,972 - IAI46_12845 0.52 +1.8 2,737,169 - IAI46_12845 0.76 +1.2 2,737,197 + IAI46_12845 0.79 -0.5 2,737,198 - IAI46_12845 0.79 +1.4 2,737,240 + IAI46_12845 0.85 -0.1 2,737,376 + -0.6 2,737,410 - +0.6 2,737,420 - -0.6 2,737,497 - -0.3 2,737,497 - +0.1 2,737,574 + IAI46_12850 0.14 -0.1 2,737,728 - IAI46_12850 0.25 -0.2 2,738,042 - IAI46_12850 0.47 +0.4 2,738,177 + IAI46_12850 0.56 -0.9 2,738,178 - IAI46_12850 0.56 -0.0 2,738,272 + IAI46_12850 0.63 -0.4 2,738,272 + IAI46_12850 0.63 +0.8 2,738,273 - IAI46_12850 0.63 +0.2 2,738,301 + IAI46_12850 0.65 +0.1 2,738,479 - IAI46_12850 0.77 +0.6 2,738,479 - IAI46_12850 0.77 +0.9 2,738,680 - +0.4 2,738,784 + +0.1 2,738,785 - -0.2 2,738,805 - -0.7 2,739,294 - IAI46_12855 0.14 -1.2 2,739,314 - IAI46_12855 0.16 -0.5 2,739,403 + IAI46_12855 0.25 +0.0 2,739,404 - IAI46_12855 0.25 +1.1 2,739,465 - IAI46_12855 0.32 +0.5 2,739,577 - IAI46_12855 0.44 -0.7 2,739,644 + IAI46_12855 0.51 +0.7 2,739,646 + IAI46_12855 0.51 -0.6 2,739,646 + IAI46_12855 0.51 -0.2 2,739,769 + IAI46_12855 0.64 +0.6 2,739,770 - IAI46_12855 0.64 +0.2 2,739,790 + IAI46_12855 0.66 -0.1 2,739,791 - IAI46_12855 0.67 +1.7
Or see this region's nucleotide sequence