Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12505 and IAI46_12510 overlap by 4 nucleotides IAI46_12510 and IAI46_12515 overlap by 4 nucleotides IAI46_12515 and IAI46_12520 are separated by 12 nucleotides
IAI46_12505: IAI46_12505 - formate hydrogenlyase maturation HycH family protein, at 2,659,290 to 2,659,706
_12505
IAI46_12510: IAI46_12510 - NADH-quinone oxidoreductase subunit B family protein, at 2,659,703 to 2,660,500
_12510
IAI46_12515: IAI46_12515 - 4Fe-4S dicluster domain-containing protein, at 2,660,497 to 2,661,042
_12515
IAI46_12520: IAI46_12520 - hydrogenase large subunit, at 2,661,055 to 2,662,758
_12520
Position (kb)
2660
2661
2662 Strain fitness (log2 ratio)
-1
0
1 at 2659.612 kb on + strand, within IAI46_12505 at 2659.613 kb on - strand, within IAI46_12505 at 2659.613 kb on - strand, within IAI46_12505 at 2660.076 kb on + strand, within IAI46_12510 at 2660.077 kb on - strand, within IAI46_12510 at 2660.077 kb on - strand, within IAI46_12510 at 2660.077 kb on - strand, within IAI46_12510 at 2660.180 kb on - strand, within IAI46_12510 at 2660.539 kb on - strand at 2660.649 kb on - strand, within IAI46_12515 at 2660.736 kb on + strand, within IAI46_12515 at 2660.920 kb on + strand, within IAI46_12515 at 2661.028 kb on - strand at 2661.133 kb on + strand at 2661.167 kb on + strand at 2661.167 kb on + strand at 2661.213 kb on + strand at 2661.213 kb on + strand at 2661.230 kb on + strand, within IAI46_12520 at 2661.231 kb on - strand, within IAI46_12520 at 2661.479 kb on + strand, within IAI46_12520 at 2661.603 kb on - strand, within IAI46_12520 at 2661.666 kb on + strand, within IAI46_12520 at 2661.788 kb on + strand, within IAI46_12520 at 2661.858 kb on + strand, within IAI46_12520 at 2661.858 kb on + strand, within IAI46_12520 at 2662.008 kb on - strand, within IAI46_12520
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,659,612 + IAI46_12505 0.77 +0.7 2,659,613 - IAI46_12505 0.77 -0.2 2,659,613 - IAI46_12505 0.77 -0.6 2,660,076 + IAI46_12510 0.47 +0.2 2,660,077 - IAI46_12510 0.47 +0.4 2,660,077 - IAI46_12510 0.47 -0.8 2,660,077 - IAI46_12510 0.47 +0.7 2,660,180 - IAI46_12510 0.60 -0.4 2,660,539 - +0.4 2,660,649 - IAI46_12515 0.28 +0.3 2,660,736 + IAI46_12515 0.44 -0.5 2,660,920 + IAI46_12515 0.77 +0.9 2,661,028 - -0.5 2,661,133 + +1.0 2,661,167 + +0.2 2,661,167 + +0.2 2,661,213 + -0.3 2,661,213 + -1.6 2,661,230 + IAI46_12520 0.10 +0.4 2,661,231 - IAI46_12520 0.10 +0.9 2,661,479 + IAI46_12520 0.25 -1.4 2,661,603 - IAI46_12520 0.32 -0.2 2,661,666 + IAI46_12520 0.36 +0.6 2,661,788 + IAI46_12520 0.43 -0.3 2,661,858 + IAI46_12520 0.47 +1.1 2,661,858 + IAI46_12520 0.47 +0.6 2,662,008 - IAI46_12520 0.56 +0.4
Or see this region's nucleotide sequence