Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12240 and IAI46_12245 overlap by 1 nucleotides IAI46_12245 and IAI46_12250 are separated by 91 nucleotides IAI46_12250 and IAI46_12255 are separated by 149 nucleotides
IAI46_12240: IAI46_12240 - Gfo/Idh/MocA family oxidoreductase, at 2,596,796 to 2,597,812
_12240
IAI46_12245: IAI46_12245 - TIM barrel protein, at 2,597,812 to 2,598,591
_12245
IAI46_12250: IAI46_12250 - substrate-binding domain-containing protein, at 2,598,683 to 2,599,606
_12250
IAI46_12255: IAI46_12255 - MFS transporter, at 2,599,756 to 2,600,982
_12255
Position (kb)
2598
2599
2600 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2597.835 kb on - strand at 2597.849 kb on + strand at 2597.971 kb on - strand, within IAI46_12245 at 2597.971 kb on - strand, within IAI46_12245 at 2598.182 kb on + strand, within IAI46_12245 at 2598.408 kb on - strand, within IAI46_12245 at 2598.491 kb on + strand, within IAI46_12245 at 2598.563 kb on + strand at 2598.653 kb on + strand at 2598.788 kb on - strand, within IAI46_12250 at 2598.830 kb on - strand, within IAI46_12250 at 2599.053 kb on - strand, within IAI46_12250 at 2599.053 kb on - strand, within IAI46_12250 at 2599.053 kb on - strand, within IAI46_12250 at 2599.053 kb on - strand, within IAI46_12250 at 2599.056 kb on + strand, within IAI46_12250 at 2599.118 kb on + strand, within IAI46_12250 at 2599.118 kb on + strand, within IAI46_12250 at 2599.209 kb on - strand, within IAI46_12250 at 2599.545 kb on + strand at 2599.604 kb on + strand at 2599.604 kb on + strand at 2599.604 kb on + strand at 2599.605 kb on - strand at 2599.608 kb on + strand at 2599.608 kb on + strand at 2599.608 kb on + strand at 2599.608 kb on + strand at 2599.609 kb on - strand at 2599.609 kb on - strand at 2599.609 kb on - strand at 2599.711 kb on + strand at 2599.915 kb on - strand, within IAI46_12255 at 2599.962 kb on - strand, within IAI46_12255 at 2599.966 kb on - strand, within IAI46_12255 at 2600.123 kb on + strand, within IAI46_12255 at 2600.123 kb on + strand, within IAI46_12255 at 2600.123 kb on + strand, within IAI46_12255 at 2600.124 kb on - strand, within IAI46_12255 at 2600.509 kb on + strand, within IAI46_12255
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,597,835 - -0.0 2,597,849 + -0.1 2,597,971 - IAI46_12245 0.20 +0.2 2,597,971 - IAI46_12245 0.20 -1.9 2,598,182 + IAI46_12245 0.47 +0.8 2,598,408 - IAI46_12245 0.76 +0.3 2,598,491 + IAI46_12245 0.87 +1.1 2,598,563 + +0.9 2,598,653 + +1.2 2,598,788 - IAI46_12250 0.11 -0.8 2,598,830 - IAI46_12250 0.16 +0.6 2,599,053 - IAI46_12250 0.40 -0.3 2,599,053 - IAI46_12250 0.40 -0.8 2,599,053 - IAI46_12250 0.40 +1.2 2,599,053 - IAI46_12250 0.40 -0.6 2,599,056 + IAI46_12250 0.40 +0.2 2,599,118 + IAI46_12250 0.47 +0.3 2,599,118 + IAI46_12250 0.47 +0.9 2,599,209 - IAI46_12250 0.57 +0.7 2,599,545 + -0.5 2,599,604 + +0.3 2,599,604 + +0.7 2,599,604 + -2.2 2,599,605 - +0.2 2,599,608 + +0.3 2,599,608 + -1.1 2,599,608 + -0.1 2,599,608 + +0.7 2,599,609 - +2.2 2,599,609 - +1.3 2,599,609 - +0.6 2,599,711 + +0.0 2,599,915 - IAI46_12255 0.13 +1.2 2,599,962 - IAI46_12255 0.17 -0.5 2,599,966 - IAI46_12255 0.17 -0.7 2,600,123 + IAI46_12255 0.30 -0.0 2,600,123 + IAI46_12255 0.30 +0.2 2,600,123 + IAI46_12255 0.30 +1.3 2,600,124 - IAI46_12255 0.30 +1.1 2,600,509 + IAI46_12255 0.61 -0.3
Or see this region's nucleotide sequence