Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12125 and IAI46_12130 overlap by 22 nucleotides IAI46_12130 and IAI46_12135 are separated by 83 nucleotides IAI46_12135 and IAI46_12140 are separated by 9 nucleotides
IAI46_12125: IAI46_12125 - MFS transporter, at 2,566,016 to 2,567,452
_12125
IAI46_12130: IAI46_12130 - VOC family protein, at 2,567,431 to 2,567,832
_12130
IAI46_12135: IAI46_12135 - LVIVD repeat-containing protein, at 2,567,916 to 2,569,163
_12135
IAI46_12140: IAI46_12140 - sugar ABC transporter substrate-binding protein, at 2,569,173 to 2,570,246
_12140
Position (kb)
2567
2568
2569
2570 Strain fitness (log2 ratio)
-2
-1
0
1 at 2567.105 kb on + strand, within IAI46_12125 at 2567.274 kb on + strand, within IAI46_12125 at 2567.348 kb on - strand at 2567.351 kb on + strand at 2567.351 kb on + strand at 2567.433 kb on - strand at 2567.653 kb on - strand, within IAI46_12130 at 2567.654 kb on + strand, within IAI46_12130 at 2567.655 kb on - strand, within IAI46_12130 at 2567.812 kb on + strand at 2567.820 kb on + strand at 2567.820 kb on + strand at 2567.821 kb on - strand at 2567.821 kb on - strand at 2567.826 kb on + strand at 2567.827 kb on - strand at 2567.827 kb on - strand at 2567.827 kb on - strand at 2567.833 kb on - strand at 2567.856 kb on + strand at 2567.857 kb on - strand at 2567.873 kb on + strand at 2567.965 kb on + strand at 2568.107 kb on - strand, within IAI46_12135 at 2568.220 kb on + strand, within IAI46_12135 at 2568.345 kb on + strand, within IAI46_12135 at 2568.346 kb on - strand, within IAI46_12135 at 2568.466 kb on - strand, within IAI46_12135 at 2568.529 kb on + strand, within IAI46_12135 at 2568.530 kb on - strand, within IAI46_12135 at 2568.776 kb on + strand, within IAI46_12135 at 2568.850 kb on + strand, within IAI46_12135 at 2569.046 kb on - strand at 2569.046 kb on - strand at 2569.051 kb on + strand at 2569.052 kb on - strand at 2569.325 kb on + strand, within IAI46_12140 at 2569.482 kb on - strand, within IAI46_12140 at 2569.588 kb on + strand, within IAI46_12140 at 2569.746 kb on + strand, within IAI46_12140 at 2569.747 kb on - strand, within IAI46_12140 at 2569.747 kb on - strand, within IAI46_12140 at 2569.952 kb on + strand, within IAI46_12140 at 2569.953 kb on - strand, within IAI46_12140 at 2569.963 kb on + strand, within IAI46_12140 at 2569.964 kb on - strand, within IAI46_12140 at 2570.030 kb on + strand, within IAI46_12140 at 2570.091 kb on - strand, within IAI46_12140
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,567,105 + IAI46_12125 0.76 -0.2 2,567,274 + IAI46_12125 0.88 +0.6 2,567,348 - +0.7 2,567,351 + -1.3 2,567,351 + +1.1 2,567,433 - +1.6 2,567,653 - IAI46_12130 0.55 -0.3 2,567,654 + IAI46_12130 0.55 +1.1 2,567,655 - IAI46_12130 0.56 +0.7 2,567,812 + +0.7 2,567,820 + -2.6 2,567,820 + -0.8 2,567,821 - +0.7 2,567,821 - +0.0 2,567,826 + -0.7 2,567,827 - +0.1 2,567,827 - -0.0 2,567,827 - -0.1 2,567,833 - +0.5 2,567,856 + +0.5 2,567,857 - +1.1 2,567,873 + +0.3 2,567,965 + -0.4 2,568,107 - IAI46_12135 0.15 -0.9 2,568,220 + IAI46_12135 0.24 +0.5 2,568,345 + IAI46_12135 0.34 +0.3 2,568,346 - IAI46_12135 0.34 +0.1 2,568,466 - IAI46_12135 0.44 +0.7 2,568,529 + IAI46_12135 0.49 -0.7 2,568,530 - IAI46_12135 0.49 +0.1 2,568,776 + IAI46_12135 0.69 +0.5 2,568,850 + IAI46_12135 0.75 +0.7 2,569,046 - -0.2 2,569,046 - -0.2 2,569,051 + +0.1 2,569,052 - -0.4 2,569,325 + IAI46_12140 0.14 +0.8 2,569,482 - IAI46_12140 0.29 +0.1 2,569,588 + IAI46_12140 0.39 -0.3 2,569,746 + IAI46_12140 0.53 +0.6 2,569,747 - IAI46_12140 0.53 -0.7 2,569,747 - IAI46_12140 0.53 +0.0 2,569,952 + IAI46_12140 0.73 +0.3 2,569,953 - IAI46_12140 0.73 +0.7 2,569,963 + IAI46_12140 0.74 -0.2 2,569,964 - IAI46_12140 0.74 +0.3 2,570,030 + IAI46_12140 0.80 +0.2 2,570,091 - IAI46_12140 0.85 -0.2
Or see this region's nucleotide sequence