Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10580 and IAI46_10585 are separated by 55 nucleotides IAI46_10585 and IAI46_10590 are separated by 462 nucleotides
IAI46_10580: IAI46_10580 - nucleoside-specific channel-forming protein Tsx, at 2,235,266 to 2,236,141
_10580
IAI46_10585: IAI46_10585 - hypothetical protein, at 2,236,197 to 2,236,376
_10585
IAI46_10590: IAI46_10590 - hypothetical protein, at 2,236,839 to 2,237,312
_10590
Position (kb)
2236
2237 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2235.248 kb on + strand at 2235.294 kb on + strand at 2235.295 kb on - strand at 2235.295 kb on - strand at 2235.311 kb on + strand at 2235.311 kb on + strand at 2235.312 kb on - strand at 2235.350 kb on + strand at 2235.354 kb on + strand, within IAI46_10580 at 2235.396 kb on - strand, within IAI46_10580 at 2235.480 kb on - strand, within IAI46_10580 at 2235.485 kb on + strand, within IAI46_10580 at 2235.485 kb on + strand, within IAI46_10580 at 2235.535 kb on + strand, within IAI46_10580 at 2235.535 kb on + strand, within IAI46_10580 at 2235.536 kb on - strand, within IAI46_10580 at 2235.562 kb on + strand, within IAI46_10580 at 2235.653 kb on + strand, within IAI46_10580 at 2235.653 kb on + strand, within IAI46_10580 at 2235.654 kb on - strand, within IAI46_10580 at 2235.654 kb on - strand, within IAI46_10580 at 2235.654 kb on - strand, within IAI46_10580 at 2235.654 kb on - strand, within IAI46_10580 at 2235.659 kb on + strand, within IAI46_10580 at 2235.659 kb on + strand, within IAI46_10580 at 2235.659 kb on + strand, within IAI46_10580 at 2235.659 kb on + strand, within IAI46_10580 at 2235.660 kb on - strand, within IAI46_10580 at 2235.660 kb on - strand, within IAI46_10580 at 2235.660 kb on - strand, within IAI46_10580 at 2235.660 kb on - strand, within IAI46_10580 at 2235.701 kb on + strand, within IAI46_10580 at 2235.703 kb on + strand, within IAI46_10580 at 2235.704 kb on - strand, within IAI46_10580 at 2235.704 kb on - strand, within IAI46_10580 at 2235.761 kb on + strand, within IAI46_10580 at 2235.761 kb on + strand, within IAI46_10580 at 2235.761 kb on + strand, within IAI46_10580 at 2235.762 kb on - strand, within IAI46_10580 at 2235.762 kb on - strand, within IAI46_10580 at 2235.836 kb on + strand, within IAI46_10580 at 2235.836 kb on + strand, within IAI46_10580 at 2235.836 kb on + strand, within IAI46_10580 at 2235.837 kb on - strand, within IAI46_10580 at 2235.879 kb on - strand, within IAI46_10580 at 2235.999 kb on - strand, within IAI46_10580 at 2236.013 kb on + strand, within IAI46_10580 at 2236.031 kb on + strand, within IAI46_10580 at 2236.113 kb on - strand at 2236.115 kb on + strand at 2236.115 kb on + strand at 2236.116 kb on - strand at 2236.152 kb on + strand at 2236.254 kb on + strand, within IAI46_10585 at 2236.355 kb on - strand, within IAI46_10585 at 2236.457 kb on - strand at 2236.457 kb on - strand at 2236.556 kb on + strand at 2236.556 kb on + strand at 2236.747 kb on + strand at 2236.747 kb on + strand at 2236.748 kb on - strand at 2236.758 kb on + strand at 2236.802 kb on + strand at 2236.813 kb on + strand at 2236.814 kb on - strand at 2236.814 kb on - strand at 2236.854 kb on - strand at 2236.867 kb on + strand at 2236.958 kb on + strand, within IAI46_10590 at 2236.959 kb on - strand, within IAI46_10590 at 2236.976 kb on + strand, within IAI46_10590 at 2236.976 kb on + strand, within IAI46_10590 at 2236.976 kb on + strand, within IAI46_10590 at 2237.019 kb on - strand, within IAI46_10590 at 2237.089 kb on - strand, within IAI46_10590
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,235,248 + -0.6 2,235,294 + +0.7 2,235,295 - -0.1 2,235,295 - +0.2 2,235,311 + +0.2 2,235,311 + +0.1 2,235,312 - -3.4 2,235,350 + -0.1 2,235,354 + IAI46_10580 0.10 +0.4 2,235,396 - IAI46_10580 0.15 +1.5 2,235,480 - IAI46_10580 0.24 +0.1 2,235,485 + IAI46_10580 0.25 -0.9 2,235,485 + IAI46_10580 0.25 -0.1 2,235,535 + IAI46_10580 0.31 -0.8 2,235,535 + IAI46_10580 0.31 +0.4 2,235,536 - IAI46_10580 0.31 +0.2 2,235,562 + IAI46_10580 0.34 -0.5 2,235,653 + IAI46_10580 0.44 -0.1 2,235,653 + IAI46_10580 0.44 +0.4 2,235,654 - IAI46_10580 0.44 -2.0 2,235,654 - IAI46_10580 0.44 -1.0 2,235,654 - IAI46_10580 0.44 -0.4 2,235,654 - IAI46_10580 0.44 +0.2 2,235,659 + IAI46_10580 0.45 +1.0 2,235,659 + IAI46_10580 0.45 +0.9 2,235,659 + IAI46_10580 0.45 +0.4 2,235,659 + IAI46_10580 0.45 -1.8 2,235,660 - IAI46_10580 0.45 -0.2 2,235,660 - IAI46_10580 0.45 +1.2 2,235,660 - IAI46_10580 0.45 +0.9 2,235,660 - IAI46_10580 0.45 +0.1 2,235,701 + IAI46_10580 0.50 +0.7 2,235,703 + IAI46_10580 0.50 +0.2 2,235,704 - IAI46_10580 0.50 -0.9 2,235,704 - IAI46_10580 0.50 -0.8 2,235,761 + IAI46_10580 0.57 +0.1 2,235,761 + IAI46_10580 0.57 -0.1 2,235,761 + IAI46_10580 0.57 -0.1 2,235,762 - IAI46_10580 0.57 +1.5 2,235,762 - IAI46_10580 0.57 +0.3 2,235,836 + IAI46_10580 0.65 +0.6 2,235,836 + IAI46_10580 0.65 -0.1 2,235,836 + IAI46_10580 0.65 +0.8 2,235,837 - IAI46_10580 0.65 -0.4 2,235,879 - IAI46_10580 0.70 +0.2 2,235,999 - IAI46_10580 0.84 +0.0 2,236,013 + IAI46_10580 0.85 -0.8 2,236,031 + IAI46_10580 0.87 +0.2 2,236,113 - -0.2 2,236,115 + -0.9 2,236,115 + -0.5 2,236,116 - +0.2 2,236,152 + -0.6 2,236,254 + IAI46_10585 0.32 +0.6 2,236,355 - IAI46_10585 0.88 +0.1 2,236,457 - -1.0 2,236,457 - +0.2 2,236,556 + +0.2 2,236,556 + -1.6 2,236,747 + -0.1 2,236,747 + +0.2 2,236,748 - +0.9 2,236,758 + -0.6 2,236,802 + -0.0 2,236,813 + +0.8 2,236,814 - +1.2 2,236,814 - +0.2 2,236,854 - +0.1 2,236,867 + +0.3 2,236,958 + IAI46_10590 0.25 +0.0 2,236,959 - IAI46_10590 0.25 +0.9 2,236,976 + IAI46_10590 0.29 -0.1 2,236,976 + IAI46_10590 0.29 -0.0 2,236,976 + IAI46_10590 0.29 +0.1 2,237,019 - IAI46_10590 0.38 -2.0 2,237,089 - IAI46_10590 0.53 -0.1
Or see this region's nucleotide sequence