Strain Fitness in Serratia liquefaciens MT49 around IAI46_10435

Experiment: dichromate 20 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_10430 and IAI46_10435 are separated by 22 nucleotidesIAI46_10435 and IAI46_10440 are separated by 2 nucleotides IAI46_10430: IAI46_10430 - adenylosuccinate lyase, at 2,205,562 to 2,206,932 _10430 IAI46_10435: IAI46_10435 - high frequency lysogenization protein HflD, at 2,206,955 to 2,207,581 _10435 IAI46_10440: IAI46_10440 - tRNA 2-thiouridine(34) synthase MnmA, at 2,207,584 to 2,208,687 _10440 Position (kb) 2206 2207 2208Strain fitness (log2 ratio) -1 0 1at 2207.013 kb on - strandat 2207.173 kb on - strand, within IAI46_10435at 2207.173 kb on - strand, within IAI46_10435at 2207.198 kb on - strand, within IAI46_10435at 2207.594 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic
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2,207,013 - +0.5
2,207,173 - IAI46_10435 0.35 -0.8
2,207,173 - IAI46_10435 0.35 -0.8
2,207,198 - IAI46_10435 0.39 +0.6
2,207,594 - +0.1

Or see this region's nucleotide sequence