Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10210 and IAI46_10215 are separated by 81 nucleotides IAI46_10215 and IAI46_10220 overlap by 4 nucleotides IAI46_10220 and IAI46_10225 are separated by 41 nucleotides IAI46_10225 and IAI46_10230 overlap by 15 nucleotides
IAI46_10210: IAI46_10210 - NupC/NupG family nucleoside CNT transporter, at 2,156,999 to 2,158,270
_10210
IAI46_10215: IAI46_10215 - helix-turn-helix transcriptional regulator, at 2,158,352 to 2,158,666
_10215
IAI46_10220: IAI46_10220 - polyketide cyclase, at 2,158,663 to 2,159,001
_10220
IAI46_10225: IAI46_10225 - ATP-dependent Clp protease proteolytic subunit, at 2,159,043 to 2,159,636
_10225
IAI46_10230: IAI46_10230 - TetR/AcrR family transcriptional regulator, at 2,159,622 to 2,160,185
_10230
Position (kb)
2158
2159 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2157.490 kb on + strand, within IAI46_10210 at 2157.493 kb on + strand, within IAI46_10210 at 2157.599 kb on + strand, within IAI46_10210 at 2157.653 kb on - strand, within IAI46_10210 at 2157.795 kb on + strand, within IAI46_10210 at 2157.826 kb on + strand, within IAI46_10210 at 2157.897 kb on - strand, within IAI46_10210 at 2157.918 kb on - strand, within IAI46_10210 at 2157.918 kb on - strand, within IAI46_10210 at 2157.919 kb on + strand, within IAI46_10210 at 2157.932 kb on - strand, within IAI46_10210 at 2158.001 kb on + strand, within IAI46_10210 at 2158.338 kb on - strand at 2158.340 kb on + strand at 2158.347 kb on + strand at 2158.348 kb on - strand at 2158.551 kb on - strand, within IAI46_10215 at 2158.601 kb on + strand, within IAI46_10215 at 2158.602 kb on - strand, within IAI46_10215 at 2158.602 kb on - strand, within IAI46_10215 at 2158.922 kb on + strand, within IAI46_10220 at 2159.111 kb on + strand, within IAI46_10225 at 2159.239 kb on + strand, within IAI46_10225 at 2159.243 kb on + strand, within IAI46_10225 at 2159.286 kb on + strand, within IAI46_10225 at 2159.287 kb on - strand, within IAI46_10225 at 2159.294 kb on + strand, within IAI46_10225 at 2159.294 kb on + strand, within IAI46_10225 at 2159.294 kb on + strand, within IAI46_10225 at 2159.301 kb on + strand, within IAI46_10225 at 2159.301 kb on + strand, within IAI46_10225 at 2159.321 kb on + strand, within IAI46_10225 at 2159.321 kb on + strand, within IAI46_10225 at 2159.322 kb on - strand, within IAI46_10225 at 2159.322 kb on - strand, within IAI46_10225 at 2159.322 kb on - strand, within IAI46_10225 at 2159.460 kb on - strand, within IAI46_10225 at 2159.460 kb on - strand, within IAI46_10225 at 2159.466 kb on - strand, within IAI46_10225 at 2159.615 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,157,490 + IAI46_10210 0.39 -1.2 2,157,493 + IAI46_10210 0.39 +0.4 2,157,599 + IAI46_10210 0.47 +0.4 2,157,653 - IAI46_10210 0.51 +0.7 2,157,795 + IAI46_10210 0.63 +0.1 2,157,826 + IAI46_10210 0.65 +0.4 2,157,897 - IAI46_10210 0.71 +0.9 2,157,918 - IAI46_10210 0.72 +0.3 2,157,918 - IAI46_10210 0.72 -1.1 2,157,919 + IAI46_10210 0.72 -0.8 2,157,932 - IAI46_10210 0.73 +0.1 2,158,001 + IAI46_10210 0.79 -0.0 2,158,338 - +0.4 2,158,340 + -0.1 2,158,347 + +0.9 2,158,348 - -0.2 2,158,551 - IAI46_10215 0.63 -0.4 2,158,601 + IAI46_10215 0.79 +1.2 2,158,602 - IAI46_10215 0.79 -1.1 2,158,602 - IAI46_10215 0.79 -0.5 2,158,922 + IAI46_10220 0.76 +0.0 2,159,111 + IAI46_10225 0.11 +0.1 2,159,239 + IAI46_10225 0.33 +1.4 2,159,243 + IAI46_10225 0.34 +0.4 2,159,286 + IAI46_10225 0.41 +1.2 2,159,287 - IAI46_10225 0.41 -2.9 2,159,294 + IAI46_10225 0.42 +0.2 2,159,294 + IAI46_10225 0.42 +0.9 2,159,294 + IAI46_10225 0.42 -1.2 2,159,301 + IAI46_10225 0.43 +1.2 2,159,301 + IAI46_10225 0.43 +0.3 2,159,321 + IAI46_10225 0.47 -0.3 2,159,321 + IAI46_10225 0.47 -0.5 2,159,322 - IAI46_10225 0.47 +0.6 2,159,322 - IAI46_10225 0.47 +1.0 2,159,322 - IAI46_10225 0.47 +0.5 2,159,460 - IAI46_10225 0.70 +1.5 2,159,460 - IAI46_10225 0.70 -0.4 2,159,466 - IAI46_10225 0.71 +1.6 2,159,615 + +0.9
Or see this region's nucleotide sequence