Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09915 and IAI46_09920 are separated by 292 nucleotides IAI46_09920 and IAI46_09925 are separated by 229 nucleotides
IAI46_09915: IAI46_09915 - glycine zipper 2TM domain-containing protein, at 2,095,923 to 2,096,459
_09915
IAI46_09920: IAI46_09920 - Rrf2 family transcriptional regulator, at 2,096,752 to 2,097,237
_09920
IAI46_09925: IAI46_09925 - multidrug efflux RND transporter permease subunit SdeB, at 2,097,467 to 2,100,610
_09925
Position (kb)
2096
2097
2098 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2095.876 kb on - strand at 2095.958 kb on + strand at 2096.309 kb on + strand, within IAI46_09915 at 2096.358 kb on + strand, within IAI46_09915 at 2096.494 kb on - strand at 2096.494 kb on - strand at 2096.530 kb on + strand at 2096.534 kb on - strand at 2096.554 kb on - strand at 2096.558 kb on - strand at 2096.595 kb on + strand at 2096.596 kb on - strand at 2096.608 kb on - strand at 2096.612 kb on + strand at 2096.645 kb on - strand at 2096.662 kb on + strand at 2096.663 kb on - strand at 2096.665 kb on - strand at 2096.668 kb on - strand at 2096.789 kb on + strand at 2096.789 kb on + strand at 2096.793 kb on + strand at 2096.793 kb on + strand at 2097.009 kb on + strand, within IAI46_09920 at 2097.193 kb on + strand at 2097.193 kb on + strand at 2097.195 kb on + strand at 2097.277 kb on + strand at 2097.355 kb on + strand at 2097.468 kb on + strand at 2097.490 kb on + strand at 2097.502 kb on + strand at 2097.502 kb on + strand at 2097.519 kb on + strand at 2097.581 kb on - strand at 2097.581 kb on - strand at 2097.584 kb on - strand at 2097.650 kb on - strand at 2097.659 kb on - strand at 2097.795 kb on - strand, within IAI46_09925 at 2097.806 kb on + strand, within IAI46_09925 at 2097.807 kb on - strand, within IAI46_09925 at 2097.918 kb on + strand, within IAI46_09925 at 2097.970 kb on + strand, within IAI46_09925 at 2097.970 kb on + strand, within IAI46_09925 at 2097.971 kb on - strand, within IAI46_09925 at 2098.030 kb on + strand, within IAI46_09925 at 2098.030 kb on + strand, within IAI46_09925 at 2098.030 kb on + strand, within IAI46_09925 at 2098.048 kb on + strand, within IAI46_09925 at 2098.049 kb on - strand, within IAI46_09925 at 2098.049 kb on - strand, within IAI46_09925 at 2098.049 kb on - strand, within IAI46_09925 at 2098.168 kb on - strand, within IAI46_09925
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,095,876 - +0.3 2,095,958 + -0.4 2,096,309 + IAI46_09915 0.72 -2.0 2,096,358 + IAI46_09915 0.81 +1.0 2,096,494 - -0.2 2,096,494 - -0.9 2,096,530 + +1.2 2,096,534 - -0.7 2,096,554 - +0.8 2,096,558 - -1.6 2,096,595 + +1.1 2,096,596 - -0.2 2,096,608 - -0.5 2,096,612 + -1.1 2,096,645 - +0.7 2,096,662 + +1.4 2,096,663 - -1.2 2,096,665 - -0.2 2,096,668 - +0.8 2,096,789 + +0.1 2,096,789 + -0.9 2,096,793 + -3.4 2,096,793 + +0.3 2,097,009 + IAI46_09920 0.53 +0.6 2,097,193 + +1.2 2,097,193 + -0.1 2,097,195 + +0.6 2,097,277 + -1.6 2,097,355 + -0.0 2,097,468 + -0.1 2,097,490 + +0.3 2,097,502 + -0.6 2,097,502 + +0.6 2,097,519 + -0.9 2,097,581 - -0.0 2,097,581 - -0.2 2,097,584 - -0.2 2,097,650 - +1.2 2,097,659 - +0.6 2,097,795 - IAI46_09925 0.10 -0.8 2,097,806 + IAI46_09925 0.11 +0.6 2,097,807 - IAI46_09925 0.11 -0.4 2,097,918 + IAI46_09925 0.14 +0.4 2,097,970 + IAI46_09925 0.16 -0.3 2,097,970 + IAI46_09925 0.16 +1.1 2,097,971 - IAI46_09925 0.16 +0.4 2,098,030 + IAI46_09925 0.18 +0.7 2,098,030 + IAI46_09925 0.18 -0.9 2,098,030 + IAI46_09925 0.18 +0.7 2,098,048 + IAI46_09925 0.18 -0.1 2,098,049 - IAI46_09925 0.19 -0.7 2,098,049 - IAI46_09925 0.19 -1.1 2,098,049 - IAI46_09925 0.19 +0.1 2,098,168 - IAI46_09925 0.22 +0.3
Or see this region's nucleotide sequence