Experiment: dichromate 20 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09470 and IAI46_09475 are separated by 53 nucleotides IAI46_09475 and IAI46_09480 are separated by 11 nucleotides IAI46_09480 and IAI46_09485 are separated by 42 nucleotides IAI46_09485 and IAI46_09490 overlap by 1 nucleotides IAI46_09490 and IAI46_09495 overlap by 1 nucleotides
IAI46_09470: IAI46_09470 - hypothetical protein, at 2,010,668 to 2,011,651
_09470
IAI46_09475: IAI46_09475 - hypothetical protein, at 2,011,705 to 2,012,151
_09475
IAI46_09480: IAI46_09480 - hypothetical protein, at 2,012,163 to 2,012,453
_09480
IAI46_09485: IAI46_09485 - hypothetical protein, at 2,012,496 to 2,012,819
_09485
IAI46_09490: IAI46_09490 - hypothetical protein, at 2,012,819 to 2,013,427
_09490
IAI46_09495: IAI46_09495 - hypothetical protein, at 2,013,427 to 2,015,922
_09495
Position (kb)
2012
2013 Strain fitness (log2 ratio)
-1
0
1
2 at 2011.609 kb on + strand at 2011.649 kb on + strand at 2011.725 kb on + strand at 2011.725 kb on + strand at 2011.726 kb on - strand at 2011.726 kb on - strand at 2011.768 kb on - strand, within IAI46_09475 at 2011.793 kb on + strand, within IAI46_09475 at 2011.793 kb on + strand, within IAI46_09475 at 2011.794 kb on - strand, within IAI46_09475 at 2011.794 kb on - strand, within IAI46_09475 at 2011.794 kb on - strand, within IAI46_09475 at 2011.795 kb on + strand, within IAI46_09475 at 2011.795 kb on + strand, within IAI46_09475 at 2011.795 kb on + strand, within IAI46_09475 at 2011.796 kb on - strand, within IAI46_09475 at 2011.979 kb on + strand, within IAI46_09475 at 2012.044 kb on + strand, within IAI46_09475 at 2012.045 kb on - strand, within IAI46_09475 at 2012.045 kb on - strand, within IAI46_09475 at 2012.182 kb on - strand at 2012.234 kb on + strand, within IAI46_09480 at 2012.333 kb on + strand, within IAI46_09480 at 2012.334 kb on - strand, within IAI46_09480 at 2012.334 kb on - strand, within IAI46_09480 at 2012.452 kb on - strand at 2012.533 kb on - strand, within IAI46_09485 at 2012.654 kb on + strand, within IAI46_09485 at 2012.654 kb on + strand, within IAI46_09485 at 2012.655 kb on - strand, within IAI46_09485 at 2012.983 kb on + strand, within IAI46_09490 at 2013.033 kb on - strand, within IAI46_09490 at 2013.033 kb on - strand, within IAI46_09490 at 2013.034 kb on + strand, within IAI46_09490 at 2013.035 kb on - strand, within IAI46_09490 at 2013.035 kb on - strand, within IAI46_09490 at 2013.035 kb on - strand, within IAI46_09490 at 2013.035 kb on - strand, within IAI46_09490 at 2013.035 kb on - strand, within IAI46_09490 at 2013.035 kb on - strand, within IAI46_09490 at 2013.038 kb on + strand, within IAI46_09490 at 2013.039 kb on - strand, within IAI46_09490 at 2013.064 kb on + strand, within IAI46_09490 at 2013.065 kb on - strand, within IAI46_09490 at 2013.125 kb on + strand, within IAI46_09490 at 2013.125 kb on + strand, within IAI46_09490 at 2013.125 kb on + strand, within IAI46_09490 at 2013.125 kb on + strand, within IAI46_09490 at 2013.126 kb on - strand, within IAI46_09490 at 2013.164 kb on - strand, within IAI46_09490 at 2013.169 kb on + strand, within IAI46_09490 at 2013.170 kb on - strand, within IAI46_09490 at 2013.197 kb on + strand, within IAI46_09490 at 2013.223 kb on + strand, within IAI46_09490 at 2013.223 kb on + strand, within IAI46_09490 at 2013.224 kb on - strand, within IAI46_09490 at 2013.425 kb on + strand at 2013.425 kb on + strand at 2013.426 kb on - strand at 2013.426 kb on - strand at 2013.432 kb on + strand at 2013.433 kb on - strand at 2013.485 kb on - strand at 2013.586 kb on + strand at 2013.604 kb on + strand at 2013.659 kb on - strand at 2013.659 kb on - strand at 2013.659 kb on - strand at 2013.659 kb on - strand at 2013.659 kb on - strand at 2013.662 kb on + strand at 2013.663 kb on - strand at 2013.671 kb on + strand at 2013.672 kb on - strand at 2013.718 kb on + strand, within IAI46_09495 at 2013.749 kb on + strand, within IAI46_09495
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, aerobic remove 2,011,609 + -0.2 2,011,649 + +0.5 2,011,725 + +0.0 2,011,725 + +0.1 2,011,726 - +0.4 2,011,726 - +0.2 2,011,768 - IAI46_09475 0.14 +0.5 2,011,793 + IAI46_09475 0.20 +0.3 2,011,793 + IAI46_09475 0.20 +0.3 2,011,794 - IAI46_09475 0.20 -0.3 2,011,794 - IAI46_09475 0.20 +0.5 2,011,794 - IAI46_09475 0.20 -0.1 2,011,795 + IAI46_09475 0.20 +2.5 2,011,795 + IAI46_09475 0.20 +0.2 2,011,795 + IAI46_09475 0.20 +0.1 2,011,796 - IAI46_09475 0.20 -1.0 2,011,979 + IAI46_09475 0.61 +0.3 2,012,044 + IAI46_09475 0.76 -0.1 2,012,045 - IAI46_09475 0.76 +0.8 2,012,045 - IAI46_09475 0.76 -0.3 2,012,182 - -0.8 2,012,234 + IAI46_09480 0.24 +0.5 2,012,333 + IAI46_09480 0.58 -0.1 2,012,334 - IAI46_09480 0.59 +0.1 2,012,334 - IAI46_09480 0.59 -0.5 2,012,452 - -0.2 2,012,533 - IAI46_09485 0.11 +0.6 2,012,654 + IAI46_09485 0.49 -0.3 2,012,654 + IAI46_09485 0.49 -1.0 2,012,655 - IAI46_09485 0.49 +0.7 2,012,983 + IAI46_09490 0.27 +0.3 2,013,033 - IAI46_09490 0.35 +0.5 2,013,033 - IAI46_09490 0.35 -0.1 2,013,034 + IAI46_09490 0.35 -0.1 2,013,035 - IAI46_09490 0.35 +0.1 2,013,035 - IAI46_09490 0.35 +0.4 2,013,035 - IAI46_09490 0.35 -1.0 2,013,035 - IAI46_09490 0.35 -0.7 2,013,035 - IAI46_09490 0.35 -1.0 2,013,035 - IAI46_09490 0.35 +0.8 2,013,038 + IAI46_09490 0.36 +0.2 2,013,039 - IAI46_09490 0.36 -0.4 2,013,064 + IAI46_09490 0.40 +1.5 2,013,065 - IAI46_09490 0.40 +0.6 2,013,125 + IAI46_09490 0.50 +0.5 2,013,125 + IAI46_09490 0.50 +0.2 2,013,125 + IAI46_09490 0.50 +0.1 2,013,125 + IAI46_09490 0.50 -1.5 2,013,126 - IAI46_09490 0.50 +1.3 2,013,164 - IAI46_09490 0.57 +0.3 2,013,169 + IAI46_09490 0.57 +0.4 2,013,170 - IAI46_09490 0.58 -0.4 2,013,197 + IAI46_09490 0.62 -0.0 2,013,223 + IAI46_09490 0.66 -0.1 2,013,223 + IAI46_09490 0.66 +1.3 2,013,224 - IAI46_09490 0.67 -0.1 2,013,425 + +0.3 2,013,425 + +1.2 2,013,426 - +1.0 2,013,426 - +0.2 2,013,432 + -0.0 2,013,433 - +1.6 2,013,485 - -0.3 2,013,586 + -0.1 2,013,604 + +0.6 2,013,659 - -0.8 2,013,659 - -1.1 2,013,659 - -0.3 2,013,659 - +0.3 2,013,659 - -0.3 2,013,662 + +0.5 2,013,663 - -0.1 2,013,671 + +0.3 2,013,672 - +0.4 2,013,718 + IAI46_09495 0.12 +0.1 2,013,749 + IAI46_09495 0.13 +1.1
Or see this region's nucleotide sequence